Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736340
Identifier: 187736340
GI number: 187736340
Start: 2258853
End: 2259728
Strand: Reverse
Name: 187736340
Synonym: Amuc_1857
Alternate gene names: NA
Gene position: 2259728-2258853 (Counterclockwise)
Preceding gene: 187736341
Following gene: 187736339
Centisome position: 84.82
GC content: 54.11
Gene sequence:
>876_bases ATGCTGAAGACCATCGTCATTTTCATCATTGCCCTTCTGGGCTTCGGCATGATTCGCCTGCCTTTGCAGAATCATATTCT GGAACAGGAGAAGGCGGAGGGGCTGCTGGATAATCCGGTAGAGCTTTCCTCTTCCGATTATCTGGAACAACAACTTGCCA TGGTCTCCCTGGGAGGGCTCCGCTCCCTGGTGGCGGCCGTGCTGAGCATGGAAGCTTTCGACTGTTTCCTGATTTCCGAC TGGGCCAACCTGGAACGCCGCTACAACCAGGTTACCTCTCTCGCTCCTCACTCCGATTTTTACTGGGACAACGGATCGTG GCATTTGGGCAATAACGCTTCCTCCAGTTATCTGGACAATAAACGTCTTTCTCCCATGGAACGCCGGGAAGGCTTCCGCA AATACATTCAAAAGGGGCGCCGCTTCCTGGAAAAAGGCATCAACGCCAATCCTGACAGCTGGTACCTTCAATCCCTGCTG GGCAACATGTATAGCGATACCTACCGGCAACCGGACTTTGAAAAGGCGGCGGAAGCCTACCGCAAGGCACGGGATTTGGG AGCGCCTCCCCTTACGGCCCGCAAAGAATTTTATGCGCTCGTCCGTGTGCCTTCCAAATCCGGAGAAGCTCTGGAACTGG GCCGGGAGTTATTCAAGGATCCCCGCAACAGGACACCCAGCCTGGTGAGTAATATTTTTGTTCTGGAAAACAGGCTGAAC ATACCGGAAAAGGAACGCATCCCCTTCCGGGAGCTGTTTCCCACGGATGAGATCGCCCGTGACCTGATGACCAGCCATCT GGCCAATTCCCTGAAATATCCGGTAGACGGGCTGAGAGAAGCCCTGGAATCTTTGCCTCCGGCAAAAGACGAGTAA
Upstream 100 bases:
>100_bases TCCTCCTTCTATGATGGTATTTATTATTACCTAAAAGAAATAGGTATCAAGGAGCTATGCCTTTCTGAAGAACAATAGCT TTCTCAACTTTTGTGAAACT
Downstream 100 bases:
>100_bases ATCAAACAGACGGAAATAAGGGGTCATGGGAAGGCCGGCACCCTGTGCCCCAACCATGATTTCCTGTGAGCAAACGCGCT TGGCAAAACCTCCCCAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MLKTIVIFIIALLGFGMIRLPLQNHILEQEKAEGLLDNPVELSSSDYLEQQLAMVSLGGLRSLVAAVLSMEAFDCFLISD WANLERRYNQVTSLAPHSDFYWDNGSWHLGNNASSSYLDNKRLSPMERREGFRKYIQKGRRFLEKGINANPDSWYLQSLL GNMYSDTYRQPDFEKAAEAYRKARDLGAPPLTARKEFYALVRVPSKSGEALELGRELFKDPRNRTPSLVSNIFVLENRLN IPEKERIPFRELFPTDEIARDLMTSHLANSLKYPVDGLREALESLPPAKDE
Sequences:
>Translated_291_residues MLKTIVIFIIALLGFGMIRLPLQNHILEQEKAEGLLDNPVELSSSDYLEQQLAMVSLGGLRSLVAAVLSMEAFDCFLISD WANLERRYNQVTSLAPHSDFYWDNGSWHLGNNASSSYLDNKRLSPMERREGFRKYIQKGRRFLEKGINANPDSWYLQSLL GNMYSDTYRQPDFEKAAEAYRKARDLGAPPLTARKEFYALVRVPSKSGEALELGRELFKDPRNRTPSLVSNIFVLENRLN IPEKERIPFRELFPTDEIARDLMTSHLANSLKYPVDGLREALESLPPAKDE >Mature_291_residues MLKTIVIFIIALLGFGMIRLPLQNHILEQEKAEGLLDNPVELSSSDYLEQQLAMVSLGGLRSLVAAVLSMEAFDCFLISD WANLERRYNQVTSLAPHSDFYWDNGSWHLGNNASSSYLDNKRLSPMERREGFRKYIQKGRRFLEKGINANPDSWYLQSLL GNMYSDTYRQPDFEKAAEAYRKARDLGAPPLTARKEFYALVRVPSKSGEALELGRELFKDPRNRTPSLVSNIFVLENRLN IPEKERIPFRELFPTDEIARDLMTSHLANSLKYPVDGLREALESLPPAKDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33288; Mature: 33288
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKTIVIFIIALLGFGMIRLPLQNHILEQEKAEGLLDNPVELSSSDYLEQQLAMVSLGGL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH RSLVAAVLSMEAFDCFLISDWANLERRYNQVTSLAPHSDFYWDNGSWHLGNNASSSYLDN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEECCCCCCHHHHCC KRLSPMERREGFRKYIQKGRRFLEKGINANPDSWYLQSLLGNMYSDTYRQPDFEKAAEAY CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH RKARDLGAPPLTARKEFYALVRVPSKSGEALELGRELFKDPRNRTPSLVSNIFVLENRLN HHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC IPEKERIPFRELFPTDEIARDLMTSHLANSLKYPVDGLREALESLPPAKDE CCHHHCCCHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLKTIVIFIIALLGFGMIRLPLQNHILEQEKAEGLLDNPVELSSSDYLEQQLAMVSLGGL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH RSLVAAVLSMEAFDCFLISDWANLERRYNQVTSLAPHSDFYWDNGSWHLGNNASSSYLDN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEECCCCCCHHHHCC KRLSPMERREGFRKYIQKGRRFLEKGINANPDSWYLQSLLGNMYSDTYRQPDFEKAAEAY CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH RKARDLGAPPLTARKEFYALVRVPSKSGEALELGRELFKDPRNRTPSLVSNIFVLENRLN HHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC IPEKERIPFRELFPTDEIARDLMTSHLANSLKYPVDGLREALESLPPAKDE CCHHHCCCHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA