Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736340

Identifier: 187736340

GI number: 187736340

Start: 2258853

End: 2259728

Strand: Reverse

Name: 187736340

Synonym: Amuc_1857

Alternate gene names: NA

Gene position: 2259728-2258853 (Counterclockwise)

Preceding gene: 187736341

Following gene: 187736339

Centisome position: 84.82

GC content: 54.11

Gene sequence:

>876_bases
ATGCTGAAGACCATCGTCATTTTCATCATTGCCCTTCTGGGCTTCGGCATGATTCGCCTGCCTTTGCAGAATCATATTCT
GGAACAGGAGAAGGCGGAGGGGCTGCTGGATAATCCGGTAGAGCTTTCCTCTTCCGATTATCTGGAACAACAACTTGCCA
TGGTCTCCCTGGGAGGGCTCCGCTCCCTGGTGGCGGCCGTGCTGAGCATGGAAGCTTTCGACTGTTTCCTGATTTCCGAC
TGGGCCAACCTGGAACGCCGCTACAACCAGGTTACCTCTCTCGCTCCTCACTCCGATTTTTACTGGGACAACGGATCGTG
GCATTTGGGCAATAACGCTTCCTCCAGTTATCTGGACAATAAACGTCTTTCTCCCATGGAACGCCGGGAAGGCTTCCGCA
AATACATTCAAAAGGGGCGCCGCTTCCTGGAAAAAGGCATCAACGCCAATCCTGACAGCTGGTACCTTCAATCCCTGCTG
GGCAACATGTATAGCGATACCTACCGGCAACCGGACTTTGAAAAGGCGGCGGAAGCCTACCGCAAGGCACGGGATTTGGG
AGCGCCTCCCCTTACGGCCCGCAAAGAATTTTATGCGCTCGTCCGTGTGCCTTCCAAATCCGGAGAAGCTCTGGAACTGG
GCCGGGAGTTATTCAAGGATCCCCGCAACAGGACACCCAGCCTGGTGAGTAATATTTTTGTTCTGGAAAACAGGCTGAAC
ATACCGGAAAAGGAACGCATCCCCTTCCGGGAGCTGTTTCCCACGGATGAGATCGCCCGTGACCTGATGACCAGCCATCT
GGCCAATTCCCTGAAATATCCGGTAGACGGGCTGAGAGAAGCCCTGGAATCTTTGCCTCCGGCAAAAGACGAGTAA

Upstream 100 bases:

>100_bases
TCCTCCTTCTATGATGGTATTTATTATTACCTAAAAGAAATAGGTATCAAGGAGCTATGCCTTTCTGAAGAACAATAGCT
TTCTCAACTTTTGTGAAACT

Downstream 100 bases:

>100_bases
ATCAAACAGACGGAAATAAGGGGTCATGGGAAGGCCGGCACCCTGTGCCCCAACCATGATTTCCTGTGAGCAAACGCGCT
TGGCAAAACCTCCCCAAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MLKTIVIFIIALLGFGMIRLPLQNHILEQEKAEGLLDNPVELSSSDYLEQQLAMVSLGGLRSLVAAVLSMEAFDCFLISD
WANLERRYNQVTSLAPHSDFYWDNGSWHLGNNASSSYLDNKRLSPMERREGFRKYIQKGRRFLEKGINANPDSWYLQSLL
GNMYSDTYRQPDFEKAAEAYRKARDLGAPPLTARKEFYALVRVPSKSGEALELGRELFKDPRNRTPSLVSNIFVLENRLN
IPEKERIPFRELFPTDEIARDLMTSHLANSLKYPVDGLREALESLPPAKDE

Sequences:

>Translated_291_residues
MLKTIVIFIIALLGFGMIRLPLQNHILEQEKAEGLLDNPVELSSSDYLEQQLAMVSLGGLRSLVAAVLSMEAFDCFLISD
WANLERRYNQVTSLAPHSDFYWDNGSWHLGNNASSSYLDNKRLSPMERREGFRKYIQKGRRFLEKGINANPDSWYLQSLL
GNMYSDTYRQPDFEKAAEAYRKARDLGAPPLTARKEFYALVRVPSKSGEALELGRELFKDPRNRTPSLVSNIFVLENRLN
IPEKERIPFRELFPTDEIARDLMTSHLANSLKYPVDGLREALESLPPAKDE
>Mature_291_residues
MLKTIVIFIIALLGFGMIRLPLQNHILEQEKAEGLLDNPVELSSSDYLEQQLAMVSLGGLRSLVAAVLSMEAFDCFLISD
WANLERRYNQVTSLAPHSDFYWDNGSWHLGNNASSSYLDNKRLSPMERREGFRKYIQKGRRFLEKGINANPDSWYLQSLL
GNMYSDTYRQPDFEKAAEAYRKARDLGAPPLTARKEFYALVRVPSKSGEALELGRELFKDPRNRTPSLVSNIFVLENRLN
IPEKERIPFRELFPTDEIARDLMTSHLANSLKYPVDGLREALESLPPAKDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33288; Mature: 33288

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKTIVIFIIALLGFGMIRLPLQNHILEQEKAEGLLDNPVELSSSDYLEQQLAMVSLGGL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
RSLVAAVLSMEAFDCFLISDWANLERRYNQVTSLAPHSDFYWDNGSWHLGNNASSSYLDN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEECCCCCCHHHHCC
KRLSPMERREGFRKYIQKGRRFLEKGINANPDSWYLQSLLGNMYSDTYRQPDFEKAAEAY
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
RKARDLGAPPLTARKEFYALVRVPSKSGEALELGRELFKDPRNRTPSLVSNIFVLENRLN
HHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
IPEKERIPFRELFPTDEIARDLMTSHLANSLKYPVDGLREALESLPPAKDE
CCHHHCCCHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLKTIVIFIIALLGFGMIRLPLQNHILEQEKAEGLLDNPVELSSSDYLEQQLAMVSLGGL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
RSLVAAVLSMEAFDCFLISDWANLERRYNQVTSLAPHSDFYWDNGSWHLGNNASSSYLDN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEECCCCCCHHHHCC
KRLSPMERREGFRKYIQKGRRFLEKGINANPDSWYLQSLLGNMYSDTYRQPDFEKAAEAY
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
RKARDLGAPPLTARKEFYALVRVPSKSGEALELGRELFKDPRNRTPSLVSNIFVLENRLN
HHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
IPEKERIPFRELFPTDEIARDLMTSHLANSLKYPVDGLREALESLPPAKDE
CCHHHCCCHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA