Click here to switch to the map view.

The map label for this gene is 187736330

Identifier: 187736330

GI number: 187736330

Start: 2240665

End: 2241624

Strand: Direct

Name: 187736330

Synonym: Amuc_1844

Alternate gene names: NA

Gene position: 2240665-2241624 (Clockwise)

Preceding gene: 187736329

Following gene: 187736333

Centisome position: 84.11

GC content: 57.5

Gene sequence:

>960_bases
ATGGATATGAAAACCTGTATCTTTCTGACATTGGGATTGCTGGTAGGTTCGGGCTCCGGATATTCCATTGACCGGCCCGC
AGGAAGTACGGACAACCTTCAGCCGCCTCCTCTGACGCCGTACGCGCATCAGGTGAAGCCGCTCCCCTCTTCCAAACCGG
CCAGACTGGGAATTGTTCCGGGCACGGTGCCCCAAGCGCTCGTTGCGCAGCTGGAGCTTAGTGGATTCCCCGGAGTGCTG
GTGACCAAAGTGATGCCGGACAGCCCCGCCGCCAAGGCCGGGCTCCAGGAAAATGACGTCATGGTCAAGCTGGGGGATGT
CTCCCTGTCCGGTCCGCAGTCTGTGACGGAAGCCCTGTCTGAAAAGGTGCCTGGAGACAGGATTACGGCTGTATTTTACC
GGAAAGGAAAGAGGGAGACTGTTGAAATTACCCTGGATGGGGGAACGCTTTCCGCTGAAGAAATACTGGCGGCCCAGGGG
GATCCCCGCACGCAGCCCCGCGCAGTTCCTTCCGTCCGGCGTCAGACGGCGCCTTTTTCCGGAATGGCTGCACGGCCTAA
TCTCCCCCAGCGTATTCTGGATATGCAGCAGATGATGGATGAGTTTTTGAAGGATTCCGCCATGGATGATTACCGGATGG
ACGACATCATCGGCCGGATGAACCTGACTCCCGGCGCGGCGCAAATGCTCCGGAGCTTGCAGGGACTTCATCAAATGCCC
ATGCCTCCCATGGGCAAGGTTTCCGGAGGGGGCCAGAGCATGTCTTCCGTCCGGATGTCGGATGCCAACGGGACTATCGT
GGTTTCTTCTAATTCCCGGACGGGAACCACAGTTCATGTGACGGACTCTGCGGGAAAGGTTCTGTATTCCGGCCCCTACA
ATACGCAGGAGGAAAAAGCCGCCGTGCCGGAAGCCGTCAGGGAACGCTTGAAAAACATAGAAACCAATTTCTGCTTTTAA

Upstream 100 bases:

>100_bases
GTTTTCCGGTGTTCTGCGGCGAAGGATGCCGTCCCGGAAGCGGCGAAAAAAATGCACAAATTTTGAACATTGTATGGACA
GATGCTGTATATTATCTCAC

Downstream 100 bases:

>100_bases
CGGCTTCATGAAATAGCGGAGAAATCCATATTCATGAAGTTGACGACAGCTGCCCCGTGCGGGGCAGCTTTTTTTATTAC
GTGGAAGAGGAGGGGAAAGC

Product: PDZ/DHR/GLGF domain protein

Products: NA

Alternate protein names: PDZ/DHR/GLGF Domain-Containing Protein

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MDMKTCIFLTLGLLVGSGSGYSIDRPAGSTDNLQPPPLTPYAHQVKPLPSSKPARLGIVPGTVPQALVAQLELSGFPGVL
VTKVMPDSPAAKAGLQENDVMVKLGDVSLSGPQSVTEALSEKVPGDRITAVFYRKGKRETVEITLDGGTLSAEEILAAQG
DPRTQPRAVPSVRRQTAPFSGMAARPNLPQRILDMQQMMDEFLKDSAMDDYRMDDIIGRMNLTPGAAQMLRSLQGLHQMP
MPPMGKVSGGGQSMSSVRMSDANGTIVVSSNSRTGTTVHVTDSAGKVLYSGPYNTQEEKAAVPEAVRERLKNIETNFCF

Sequences:

>Translated_319_residues
MDMKTCIFLTLGLLVGSGSGYSIDRPAGSTDNLQPPPLTPYAHQVKPLPSSKPARLGIVPGTVPQALVAQLELSGFPGVL
VTKVMPDSPAAKAGLQENDVMVKLGDVSLSGPQSVTEALSEKVPGDRITAVFYRKGKRETVEITLDGGTLSAEEILAAQG
DPRTQPRAVPSVRRQTAPFSGMAARPNLPQRILDMQQMMDEFLKDSAMDDYRMDDIIGRMNLTPGAAQMLRSLQGLHQMP
MPPMGKVSGGGQSMSSVRMSDANGTIVVSSNSRTGTTVHVTDSAGKVLYSGPYNTQEEKAAVPEAVRERLKNIETNFCF
>Mature_319_residues
MDMKTCIFLTLGLLVGSGSGYSIDRPAGSTDNLQPPPLTPYAHQVKPLPSSKPARLGIVPGTVPQALVAQLELSGFPGVL
VTKVMPDSPAAKAGLQENDVMVKLGDVSLSGPQSVTEALSEKVPGDRITAVFYRKGKRETVEITLDGGTLSAEEILAAQG
DPRTQPRAVPSVRRQTAPFSGMAARPNLPQRILDMQQMMDEFLKDSAMDDYRMDDIIGRMNLTPGAAQMLRSLQGLHQMP
MPPMGKVSGGGQSMSSVRMSDANGTIVVSSNSRTGTTVHVTDSAGKVLYSGPYNTQEEKAAVPEAVRERLKNIETNFCF

Specific function: Unknown

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34085; Mature: 34085

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMKTCIFLTLGLLVGSGSGYSIDRPAGSTDNLQPPPLTPYAHQVKPLPSSKPARLGIVP
CCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEECC
GTVPQALVAQLELSGFPGVLVTKVMPDSPAAKAGLQENDVMVKLGDVSLSGPQSVTEALS
CCHHHHHHHHHHCCCCCCEEEEEECCCCCHHHCCCCCCCEEEEECCCCCCCHHHHHHHHH
EKVPGDRITAVFYRKGKRETVEITLDGGTLSAEEILAAQGDPRTQPRAVPSVRRQTAPFS
HHCCCCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCHHHHHHCCCCC
GMAARPNLPQRILDMQQMMDEFLKDSAMDDYRMDDIIGRMNLTPGAAQMLRSLQGLHQMP
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
MPPMGKVSGGGQSMSSVRMSDANGTIVVSSNSRTGTTVHVTDSAGKVLYSGPYNTQEEKA
CCCCCCCCCCCCCHHHEEEECCCCEEEEECCCCCCCEEEEECCCCCEEECCCCCCCHHHH
AVPEAVRERLKNIETNFCF
HHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDMKTCIFLTLGLLVGSGSGYSIDRPAGSTDNLQPPPLTPYAHQVKPLPSSKPARLGIVP
CCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEECC
GTVPQALVAQLELSGFPGVLVTKVMPDSPAAKAGLQENDVMVKLGDVSLSGPQSVTEALS
CCHHHHHHHHHHCCCCCCEEEEEECCCCCHHHCCCCCCCEEEEECCCCCCCHHHHHHHHH
EKVPGDRITAVFYRKGKRETVEITLDGGTLSAEEILAAQGDPRTQPRAVPSVRRQTAPFS
HHCCCCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCHHHHHHCCCCC
GMAARPNLPQRILDMQQMMDEFLKDSAMDDYRMDDIIGRMNLTPGAAQMLRSLQGLHQMP
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
MPPMGKVSGGGQSMSSVRMSDANGTIVVSSNSRTGTTVHVTDSAGKVLYSGPYNTQEEKA
CCCCCCCCCCCCCHHHEEEECCCCEEEEECCCCCCCEEEEECCCCCEEECCCCCCCHHHH
AVPEAVRERLKNIETNFCF
HHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA