Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736329

Identifier: 187736329

GI number: 187736329

Start: 2239808

End: 2240479

Strand: Direct

Name: 187736329

Synonym: Amuc_1843

Alternate gene names: NA

Gene position: 2239808-2240479 (Clockwise)

Preceding gene: 187736328

Following gene: 187736330

Centisome position: 84.07

GC content: 53.42

Gene sequence:

>672_bases
ATGAACCATGAAACAACATCATCCGCCGCAGGGGAGGAAGACGGCGGTACTGCCGTCCTGCAGCCCCTTCCCGTATCTGA
TGAACTGATTTCCCGGCTGGCCGGAAAGTGTGAGGAAATCTTCCCTTTGGAGAGCTGTTTCCGGCGTGATGAAATCTCCG
ATGATGAAATTCATGAGATGGAATCCCTTTTGAAACGTTTTCGGCCCTCTCCGGCAAAAGTCCTGTTCAGGGAACAATGC
TGTGCCCTGATGTGTGCGGAATCCGAACATGAGATGGAAACCCGGTTGAAAAGGCTTTCCGCTTCTTCCATGTTGGAATT
TTCCGTCTGTAAAATGGCGCAAGCCATGAATTGCGCCAGTAATGAAAAACGGGAAAAAGCGCTGAACATCCCCCTGTGGC
GGCGTTTTGCCTGTATTTCCGGCATTTCCGCGGCTGCCGTTGTGGGGGGCGTCATGTTGGTTCAACATGCTCTGGTGGCG
CCCGTAGGGACGGTGGCGACCGGAAATGCCGGGGAAGTTCCCTCGGAAAAGGCTGAAACTCCTGTGATTCCCGGTGAAAA
GCGGGAGTTGCTCCGGACGCCCACCCTTTTTGAATTGCAGGGAGGGGATGAGCGCGTGCCTGTGATTGCTCCCGCCGTTA
TCCGCAAAATTCTTCCTGAAAAGGAATATTAA

Upstream 100 bases:

>100_bases
CTCGCAGAATACGGCGGCGAGCCGGTACCGTTACGGTATTGACTTGCTCCGCAGGGCTTTGAGAAATAAAAAGAATCAAT
TCTAATGGCGCTCTACCCTT

Downstream 100 bases:

>100_bases
AAATTGCGGTGCATGAATATCGCCGGAATTGTGCGATCTGCTGCGGCATTGCGGCTTTCCTTGGCAGGCAGGAAAGATGC
CTGGCGTTTTCCGGTGTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MNHETTSSAAGEEDGGTAVLQPLPVSDELISRLAGKCEEIFPLESCFRRDEISDDEIHEMESLLKRFRPSPAKVLFREQC
CALMCAESEHEMETRLKRLSASSMLEFSVCKMAQAMNCASNEKREKALNIPLWRRFACISGISAAAVVGGVMLVQHALVA
PVGTVATGNAGEVPSEKAETPVIPGEKRELLRTPTLFELQGGDERVPVIAPAVIRKILPEKEY

Sequences:

>Translated_223_residues
MNHETTSSAAGEEDGGTAVLQPLPVSDELISRLAGKCEEIFPLESCFRRDEISDDEIHEMESLLKRFRPSPAKVLFREQC
CALMCAESEHEMETRLKRLSASSMLEFSVCKMAQAMNCASNEKREKALNIPLWRRFACISGISAAAVVGGVMLVQHALVA
PVGTVATGNAGEVPSEKAETPVIPGEKRELLRTPTLFELQGGDERVPVIAPAVIRKILPEKEY
>Mature_223_residues
MNHETTSSAAGEEDGGTAVLQPLPVSDELISRLAGKCEEIFPLESCFRRDEISDDEIHEMESLLKRFRPSPAKVLFREQC
CALMCAESEHEMETRLKRLSASSMLEFSVCKMAQAMNCASNEKREKALNIPLWRRFACISGISAAAVVGGVMLVQHALVA
PVGTVATGNAGEVPSEKAETPVIPGEKRELLRTPTLFELQGGDERVPVIAPAVIRKILPEKEY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24424; Mature: 24424

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHETTSSAAGEEDGGTAVLQPLPVSDELISRLAGKCEEIFPLESCFRRDEISDDEIHEM
CCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHH
ESLLKRFRPSPAKVLFREQCCALMCAESEHEMETRLKRLSASSMLEFSVCKMAQAMNCAS
HHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NEKREKALNIPLWRRFACISGISAAAVVGGVMLVQHALVAPVGTVATGNAGEVPSEKAET
HHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PVIPGEKRELLRTPTLFELQGGDERVPVIAPAVIRKILPEKEY
CCCCCCHHHHHCCCCEEEECCCCCCCCEEHHHHHHHHCCCCCC
>Mature Secondary Structure
MNHETTSSAAGEEDGGTAVLQPLPVSDELISRLAGKCEEIFPLESCFRRDEISDDEIHEM
CCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHH
ESLLKRFRPSPAKVLFREQCCALMCAESEHEMETRLKRLSASSMLEFSVCKMAQAMNCAS
HHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NEKREKALNIPLWRRFACISGISAAAVVGGVMLVQHALVAPVGTVATGNAGEVPSEKAET
HHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PVIPGEKRELLRTPTLFELQGGDERVPVIAPAVIRKILPEKEY
CCCCCCHHHHHCCCCEEEECCCCCCCCEEHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA