Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is nagB [C]
Identifier: 187736309
GI number: 187736309
Start: 2212143
End: 2213054
Strand: Direct
Name: nagB [C]
Synonym: Amuc_1822
Alternate gene names: 187736309
Gene position: 2212143-2213054 (Clockwise)
Preceding gene: 187736306
Following gene: 187736310
Centisome position: 83.04
GC content: 55.37
Gene sequence:
>912_bases ATGATCGGGGTGGAAAGTTCAAGGGTAATGCGGGCGGCTCCCAGAAAGGCCGTGGGAAGGGTGGAGGCCTCCGTTCCCTG GGATTTTTCGCGCAAGTACGCCGCTGTGCATCATTCCGGGACTATTTCGGTTGAAAATGCCCGGAAACGAAGTAAAATAG GGCGCGTTATGAAAGTAGAAACTTTTGAAACTCCCCAGGATGCTGCCAAGGCTTTGGCAGGAGAAGTTGCGGAATTGATC CGTACGCGCGCCGCTGAAGGCAAAAACGTGGTTCTTGGCCTTGCCACGGGCGCCACTCCGCTGCCTTTTTACGCGGAGCT GGTCCGCATGCATAAGGAGGAAGGCCTTTCCTTTGCCAACGTGATTTCCTTCAATCTGGACGAATACAGCGGCTTGGATC GCGACCATCCGGAATCCTACTGGTACTTCATGCACACGAATCTTTTCAACCACATCGACATCAAGCCGGAAAACATCAAC CTGCCCTCCGGCACGGTGAAGGATGATGAAATTGCCGCCCACTGCGCCGCCTATGAACAAAAGATCAAGGATTGCGGCGG TATCGACCTCCAGATTCTCGGCATTGGCCGAACTGGCCATATCGGCTTTAACGAACCCGGCTCCGATGATACCACCGTCA CCCGGCAGGTTCATCTGGACGAACTGACCCGTTCCGATGCTGCTCCCGCTTTCGGCGGTATTGAAAATGTTCCCACCACC GCCATTACCATGGGCGTGGCTACCATCATGGGCGCCCGTGAAGTGGCTTTGATGGCCTGGGGAGAAAAGAAGGCGTCCAT CGTGAAAAAGGCTGTTCAGGGGCCTGTGACGGTGGATGTGGCCGCCTCCTACCTTCAGAAGCATCCGAACGCCAAGTTTC TTCTGGACAAGGGGGCTGCTTCCCTCCTTTAA
Upstream 100 bases:
>100_bases AAAATTTTGCGCACTTCCGTGCCGTAAACCCAGTCGTGCCCTTGAAAAATGCGTGCTCTTGGAGAAATAATCAAACCTGC CATGTCAGGAAAGGCAATAC
Downstream 100 bases:
>100_bases TTTTACGTTTTAGTAACGGAAATGCCGTCTTTCCCGGTTTCGTGGAAAGGCGGCGTTTTTTATGGGGTGAAGGAAGGCGG AAGCTTCTTCTTTCCATGGA
Product: glucosamine-6-phosphate isomerase
Products: D-fructose 6-phosphate; NH3
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MIGVESSRVMRAAPRKAVGRVEASVPWDFSRKYAAVHHSGTISVENARKRSKIGRVMKVETFETPQDAAKALAGEVAELI RTRAAEGKNVVLGLATGATPLPFYAELVRMHKEEGLSFANVISFNLDEYSGLDRDHPESYWYFMHTNLFNHIDIKPENIN LPSGTVKDDEIAAHCAAYEQKIKDCGGIDLQILGIGRTGHIGFNEPGSDDTTVTRQVHLDELTRSDAAPAFGGIENVPTT AITMGVATIMGAREVALMAWGEKKASIVKKAVQGPVTVDVAASYLQKHPNAKFLLDKGAASLL
Sequences:
>Translated_303_residues MIGVESSRVMRAAPRKAVGRVEASVPWDFSRKYAAVHHSGTISVENARKRSKIGRVMKVETFETPQDAAKALAGEVAELI RTRAAEGKNVVLGLATGATPLPFYAELVRMHKEEGLSFANVISFNLDEYSGLDRDHPESYWYFMHTNLFNHIDIKPENIN LPSGTVKDDEIAAHCAAYEQKIKDCGGIDLQILGIGRTGHIGFNEPGSDDTTVTRQVHLDELTRSDAAPAFGGIENVPTT AITMGVATIMGAREVALMAWGEKKASIVKKAVQGPVTVDVAASYLQKHPNAKFLLDKGAASLL >Mature_303_residues MIGVESSRVMRAAPRKAVGRVEASVPWDFSRKYAAVHHSGTISVENARKRSKIGRVMKVETFETPQDAAKALAGEVAELI RTRAAEGKNVVLGLATGATPLPFYAELVRMHKEEGLSFANVISFNLDEYSGLDRDHPESYWYFMHTNLFNHIDIKPENIN LPSGTVKDDEIAAHCAAYEQKIKDCGGIDLQILGIGRTGHIGFNEPGSDDTTVTRQVHLDELTRSDAAPAFGGIENVPTT AITMGVATIMGAREVALMAWGEKKASIVKKAVQGPVTVDVAASYLQKHPNAKFLLDKGAASLL
Specific function: Catalyzes The Reversible Isomerization-Deamination Of Glucosamine 6-Phosphate (Glcn6p) To Form Fructose 6-Phosphate (Fru6p) And Ammonium Ion. [C]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the N-terminal section; belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily [H]
Homologues:
Organism=Homo sapiens, GI19923881, Length=247, Percent_Identity=41.2955465587045, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI13027378, Length=229, Percent_Identity=44.9781659388646, Blast_Score=175, Evalue=5e-44, Organism=Escherichia coli, GI1786893, Length=243, Percent_Identity=40.7407407407407, Blast_Score=175, Evalue=4e-45, Organism=Escherichia coli, GI1789530, Length=227, Percent_Identity=28.6343612334802, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI48994958, Length=207, Percent_Identity=30.9178743961353, Blast_Score=75, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17554876, Length=244, Percent_Identity=43.4426229508197, Blast_Score=182, Evalue=2e-46, Organism=Drosophila melanogaster, GI24581960, Length=245, Percent_Identity=40, Blast_Score=172, Evalue=2e-43, Organism=Drosophila melanogaster, GI19920764, Length=245, Percent_Identity=40, Blast_Score=172, Evalue=2e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006148 - InterPro: IPR003737 - InterPro: IPR004547 - InterPro: IPR018321 [H]
Pfam domain/function: PF01182 Glucosamine_iso; PF02585 PIG-L [H]
EC number: 3.5.99.6
Molecular weight: Translated: 32840; Mature: 32840
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGVESSRVMRAAPRKAVGRVEASVPWDFSRKYAAVHHSGTISVENARKRSKIGRVMKVE CCCCCCCHHHHHCCHHHHHCCCCCCCCCCCCCEEEEECCCEEEEHHHHHHHHHCCEEEEE TFETPQDAAKALAGEVAELIRTRAAEGKNVVLGLATGATPLPFYAELVRMHKEEGLSFAN CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEH VISFNLDEYSGLDRDHPESYWYFMHTNLFNHIDIKPENINLPSGTVKDDEIAAHCAAYEQ EEEECCHHHCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHH KIKDCGGIDLQILGIGRTGHIGFNEPGSDDTTVTRQVHLDELTRSDAAPAFGGIENVPTT HHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCHH AITMGVATIMGAREVALMAWGEKKASIVKKAVQGPVTVDVAASYLQKHPNAKFLLDKGAA HHHHHHHHHHCHHHEEEEECCCHHHHHHHHHHCCCEEHHHHHHHHHHCCCCEEEEECCHH SLL HCC >Mature Secondary Structure MIGVESSRVMRAAPRKAVGRVEASVPWDFSRKYAAVHHSGTISVENARKRSKIGRVMKVE CCCCCCCHHHHHCCHHHHHCCCCCCCCCCCCCEEEEECCCEEEEHHHHHHHHHCCEEEEE TFETPQDAAKALAGEVAELIRTRAAEGKNVVLGLATGATPLPFYAELVRMHKEEGLSFAN CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEH VISFNLDEYSGLDRDHPESYWYFMHTNLFNHIDIKPENINLPSGTVKDDEIAAHCAAYEQ EEEECCHHHCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHH KIKDCGGIDLQILGIGRTGHIGFNEPGSDDTTVTRQVHLDELTRSDAAPAFGGIENVPTT HHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCHH AITMGVATIMGAREVALMAWGEKKASIVKKAVQGPVTVDVAASYLQKHPNAKFLLDKGAA HHHHHHHHHHCHHHEEEEECCCHHHHHHHHHHCCCEEHHHHHHHHHHCCCCEEEEECCHH SLL HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: D-glucosamine 6-phosphate; H2O
Specific reaction: D-glucosamine 6-phosphate + H2O = D-fructose 6-phosphate + NH3
General reaction: Group transfer (transmolecular Intramolecular oxidoreduction) [C]
Inhibitor: N3-(4-Methoxyfumaroyl)-L-2, 3-diaminopropanoic acid [C]
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12663928 [H]