Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736310

Identifier: 187736310

GI number: 187736310

Start: 2213437

End: 2215074

Strand: Direct

Name: 187736310

Synonym: Amuc_1823

Alternate gene names: NA

Gene position: 2213437-2215074 (Clockwise)

Preceding gene: 187736309

Following gene: 187736311

Centisome position: 83.08

GC content: 52.32

Gene sequence:

>1638_bases
ATGAATAATTATATACCACTGAACAAGGCGGTCGGTCCGAAGCTTATCTGCGACGGGGAGCAGGCTCTCATCCCGCAGAA
ACTCGGAGTTGACGCGATGGAGTTCAACTTTGACGGTTCGGCGTGCGAACACGCCACTTGCGCCGGAGCGCCGGAAATGT
TCATCAAGGTCGAGGAAGACGGCCTGTATTATTTCGGCGTGGAAGCCGACGACACAGGCAGCATCTCCATTGCCAACGAG
AAACTTTGTGAGAAGGATGGAACGAAGCCCAACGGCAAGCTGAATCTGGCAACGGGTGCCAGGTACCTGAAAGCTGGCTA
TTACAAGGTGGCCTTGTCTTACACGAATAATGCCTACACCCCCGTCAGCAACAACGCTGCCGCGTTCAATGTGACGATGG
ACAGGGAACCCATTCAGGAAGGGAAGTACGAAGGCAACTCGACGATGAAACGCGAATTCTCACCGTCCCCCAAAATCAAA
TTGTGGACGATTGAAAAGGAATCCACCATTACCTGTGAAGAGTCCAGGAAAGTGGAGGTGACGCTCGAAGAACCTGCTCC
TGTCGTTGAAGAAAGCGAAGGCATATGCGAAACGTATATCATTCCCCCCCAGATTTTTGTAACGGCTTGCAAGGATGAAG
TGCTCGACGAGTGGAGACTGCGCGTGCAGCAAGTTTCCGCCGGTTCCAGGATTCTCTTGCGCACGGGAGGATACAGGGAT
GCCCTTAAAAATCCCCCTGTCACCGAAGAAGAAGCTATAGATGCTGTCAATGAAATGAACCGTTACCAGTCTCATAGACT
CGGCGCATGGCATACTCAGGAGGCATCCCTCGCCCACGAGGAACACCACCGCCGAGAATTTAATGACGCCTTCCAATTCT
ACTGGGACAATTTGAGAATACAGGATACGCTTGAAATGAAGCATGAATCCTGTGAAAAAGTTCCGAAAATGGAAGAGTTT
CTGGAAAATATGCAGCCATTCGTTACCGAGTTGAGGAATATGTATTCTGACGCTGTCTATAACTATGTCTTGGTATTGCC
GGATGATGCCAATGATCGTCCCTACTGTGCCGGACAAAAAGTTCTGAACGAGGCGACCCGGAAGATTATTGCCCAGGCAA
AGACCAATGGATGGAGCAGGGTACCTGATGAAGTCACGGAACCGGGAACGATTGAACCGCCCTGTTTCCTTCCGCCCGTC
AACGGCATGTATGCCCGCAGCGTGGCTGCTGCGGGGGAACAGGCTCCCTTGACCCTCTCCATTGCGGATACCTCCCGATT
CAGGGAGGGCAGAATCACAGTCCGCTTCCGCAACGAAGGAAACGAGCCTGTCCGGATTCCGGACGAAATCAACGACGAAA
CAGCCGATTATTTCTTCCTGACGGTGTTGAGGACGGAACGGGGGAACTTCCGCGTCCTGAACAGGAAAGTCGGGAAAATA
ACCTTCAATCGTTCCTTGAACTACCGGGAACTGGCCCCCGGCCAGGAATACAGCGTCACGATTCCGGTATGCCTGGATGA
AGTCGATCTGGAAGGCTGGAAACAATGTTCTTGTGAACTGGAAACGCGCTACTATAATCAGCAGGGTAAGGATTGTTTCC
TGGGGAAGCTCCGGGCGACGGCCAAACTCGCGCTGTGA

Upstream 100 bases:

>100_bases
CCTTCATCACGTCCGGGACGTGTTGTTGTTCTTCCTGGAATTCCTTATGTTCATTTGAGAACTAAATGGTTAGTTCTCAA
ACAGGAAACAATTCAGAAAC

Downstream 100 bases:

>100_bases
TGAAAAAAATCTTCCGGTATTTAATACTTCTGGCAAGCCTGTCCCTCCATGCCGCGGCGTGGGGGGACATGGCCGACAAC
GGAGTGGAATGCTCCGTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 545; Mature: 545

Protein sequence:

>545_residues
MNNYIPLNKAVGPKLICDGEQALIPQKLGVDAMEFNFDGSACEHATCAGAPEMFIKVEEDGLYYFGVEADDTGSISIANE
KLCEKDGTKPNGKLNLATGARYLKAGYYKVALSYTNNAYTPVSNNAAAFNVTMDREPIQEGKYEGNSTMKREFSPSPKIK
LWTIEKESTITCEESRKVEVTLEEPAPVVEESEGICETYIIPPQIFVTACKDEVLDEWRLRVQQVSAGSRILLRTGGYRD
ALKNPPVTEEEAIDAVNEMNRYQSHRLGAWHTQEASLAHEEHHRREFNDAFQFYWDNLRIQDTLEMKHESCEKVPKMEEF
LENMQPFVTELRNMYSDAVYNYVLVLPDDANDRPYCAGQKVLNEATRKIIAQAKTNGWSRVPDEVTEPGTIEPPCFLPPV
NGMYARSVAAAGEQAPLTLSIADTSRFREGRITVRFRNEGNEPVRIPDEINDETADYFFLTVLRTERGNFRVLNRKVGKI
TFNRSLNYRELAPGQEYSVTIPVCLDEVDLEGWKQCSCELETRYYNQQGKDCFLGKLRATAKLAL

Sequences:

>Translated_545_residues
MNNYIPLNKAVGPKLICDGEQALIPQKLGVDAMEFNFDGSACEHATCAGAPEMFIKVEEDGLYYFGVEADDTGSISIANE
KLCEKDGTKPNGKLNLATGARYLKAGYYKVALSYTNNAYTPVSNNAAAFNVTMDREPIQEGKYEGNSTMKREFSPSPKIK
LWTIEKESTITCEESRKVEVTLEEPAPVVEESEGICETYIIPPQIFVTACKDEVLDEWRLRVQQVSAGSRILLRTGGYRD
ALKNPPVTEEEAIDAVNEMNRYQSHRLGAWHTQEASLAHEEHHRREFNDAFQFYWDNLRIQDTLEMKHESCEKVPKMEEF
LENMQPFVTELRNMYSDAVYNYVLVLPDDANDRPYCAGQKVLNEATRKIIAQAKTNGWSRVPDEVTEPGTIEPPCFLPPV
NGMYARSVAAAGEQAPLTLSIADTSRFREGRITVRFRNEGNEPVRIPDEINDETADYFFLTVLRTERGNFRVLNRKVGKI
TFNRSLNYRELAPGQEYSVTIPVCLDEVDLEGWKQCSCELETRYYNQQGKDCFLGKLRATAKLAL
>Mature_545_residues
MNNYIPLNKAVGPKLICDGEQALIPQKLGVDAMEFNFDGSACEHATCAGAPEMFIKVEEDGLYYFGVEADDTGSISIANE
KLCEKDGTKPNGKLNLATGARYLKAGYYKVALSYTNNAYTPVSNNAAAFNVTMDREPIQEGKYEGNSTMKREFSPSPKIK
LWTIEKESTITCEESRKVEVTLEEPAPVVEESEGICETYIIPPQIFVTACKDEVLDEWRLRVQQVSAGSRILLRTGGYRD
ALKNPPVTEEEAIDAVNEMNRYQSHRLGAWHTQEASLAHEEHHRREFNDAFQFYWDNLRIQDTLEMKHESCEKVPKMEEF
LENMQPFVTELRNMYSDAVYNYVLVLPDDANDRPYCAGQKVLNEATRKIIAQAKTNGWSRVPDEVTEPGTIEPPCFLPPV
NGMYARSVAAAGEQAPLTLSIADTSRFREGRITVRFRNEGNEPVRIPDEINDETADYFFLTVLRTERGNFRVLNRKVGKI
TFNRSLNYRELAPGQEYSVTIPVCLDEVDLEGWKQCSCELETRYYNQQGKDCFLGKLRATAKLAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61691; Mature: 61691

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNYIPLNKAVGPKLICDGEQALIPQKLGVDAMEFNFDGSACEHATCAGAPEMFIKVEED
CCCCCCCCCCCCCEEEECCCHHCCCHHHCCCEEEECCCCCCCCCCCCCCCCEEEEEEECC
GLYYFGVEADDTGSISIANEKLCEKDGTKPNGKLNLATGARYLKAGYYKVALSYTNNAYT
CEEEEEEECCCCCCEEECCHHHHHHCCCCCCCEEEECCCCHHHHCCEEEEEEEECCCCCC
PVSNNAAAFNVTMDREPIQEGKYEGNSTMKREFSPSPKIKLWTIEKESTITCEESRKVEV
CCCCCCEEEEEEECCCCHHHCCCCCCCCEECCCCCCCCEEEEEECCCCEEEECCCCEEEE
TLEEPAPVVEESEGICETYIIPPQIFVTACKDEVLDEWRLRVQQVSAGSRILLRTGGYRD
EECCCCCCCCCCCCCEEEEEECCHHEEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHH
ALKNPPVTEEEAIDAVNEMNRYQSHRLGAWHTQEASLAHEEHHRREFNDAFQFYWDNLRI
HHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEE
QDTLEMKHESCEKVPKMEEFLENMQPFVTELRNMYSDAVYNYVLVLPDDANDRPYCAGQK
EHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCHHHH
VLNEATRKIIAQAKTNGWSRVPDEVTEPGTIEPPCFLPPVNGMYARSVAAAGEQAPLTLS
HHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEE
IADTSRFREGRITVRFRNEGNEPVRIPDEINDETADYFFLTVLRTERGNFRVLNRKVGKI
ECCCCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEEEE
TFNRSLNYRELAPGQEYSVTIPVCLDEVDLEGWKQCSCELETRYYNQQGKDCFLGKLRAT
EEECCCCHHCCCCCCCEEEEEEEEEECCCCCCHHHCCEEEEEHCCCCCCCEEHHHHHHHH
AKLAL
EEECC
>Mature Secondary Structure
MNNYIPLNKAVGPKLICDGEQALIPQKLGVDAMEFNFDGSACEHATCAGAPEMFIKVEED
CCCCCCCCCCCCCEEEECCCHHCCCHHHCCCEEEECCCCCCCCCCCCCCCCEEEEEEECC
GLYYFGVEADDTGSISIANEKLCEKDGTKPNGKLNLATGARYLKAGYYKVALSYTNNAYT
CEEEEEEECCCCCCEEECCHHHHHHCCCCCCCEEEECCCCHHHHCCEEEEEEEECCCCCC
PVSNNAAAFNVTMDREPIQEGKYEGNSTMKREFSPSPKIKLWTIEKESTITCEESRKVEV
CCCCCCEEEEEEECCCCHHHCCCCCCCCEECCCCCCCCEEEEEECCCCEEEECCCCEEEE
TLEEPAPVVEESEGICETYIIPPQIFVTACKDEVLDEWRLRVQQVSAGSRILLRTGGYRD
EECCCCCCCCCCCCCEEEEEECCHHEEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHH
ALKNPPVTEEEAIDAVNEMNRYQSHRLGAWHTQEASLAHEEHHRREFNDAFQFYWDNLRI
HHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEE
QDTLEMKHESCEKVPKMEEFLENMQPFVTELRNMYSDAVYNYVLVLPDDANDRPYCAGQK
EHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCHHHH
VLNEATRKIIAQAKTNGWSRVPDEVTEPGTIEPPCFLPPVNGMYARSVAAAGEQAPLTLS
HHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEE
IADTSRFREGRITVRFRNEGNEPVRIPDEINDETADYFFLTVLRTERGNFRVLNRKVGKI
ECCCCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEEEE
TFNRSLNYRELAPGQEYSVTIPVCLDEVDLEGWKQCSCELETRYYNQQGKDCFLGKLRAT
EEECCCCHHCCCCCCCEEEEEEEEEECCCCCCHHHCCEEEEEHCCCCCCCEEHHHHHHHH
AKLAL
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA