Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736307
Identifier: 187736307
GI number: 187736307
Start: 2210328
End: 2210609
Strand: Reverse
Name: 187736307
Synonym: Amuc_1820
Alternate gene names: NA
Gene position: 2210609-2210328 (Counterclockwise)
Preceding gene: 187736308
Following gene: 187736303
Centisome position: 82.98
GC content: 58.16
Gene sequence:
>282_bases ATGCATCCTGCCGTAGAACAAATCCGCCAGTACCTGCAATTGATCGCCCTGCAATTCGTGCAACACCCGGAACAGGCGGA ATTGCGCGTTGCGGAATCCCCGCAGGGAGACGCCGTCCGCTTCCGCCTGATTCTGGAAAAAACGGACGTGGCGCGCATCA TCGGCCGCAATGGAATGACGGCCTCCGCCATTCGTTCCCTGGCGAAGGCGGCTGGGGAAAAACACGGCATCAAGGTCATT GTGCATATGCTTTCCCATGAAGAGGCGGCTGAACAGCCGTAA
Upstream 100 bases:
>100_bases GGCCGGGGCGACTTTCTTTTTCAGGGAATGTCTGGAATTGCATCTTTTCAATCAGGCGGCTTTATAGTATGGTTCATGAA AATAACCCATATTTCCCTTC
Downstream 100 bases:
>100_bases ACGCACTCCTGCGCCTATAATTCCACATCCAGCACCAGGGCCAGAAGGTTAAATGGAGCCGGAGTCTCCACACGGAGGGC AAAGGAAGACTGCTCATCCA
Product: KH domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MHPAVEQIRQYLQLIALQFVQHPEQAELRVAESPQGDAVRFRLILEKTDVARIIGRNGMTASAIRSLAKAAGEKHGIKVI VHMLSHEEAAEQP
Sequences:
>Translated_93_residues MHPAVEQIRQYLQLIALQFVQHPEQAELRVAESPQGDAVRFRLILEKTDVARIIGRNGMTASAIRSLAKAAGEKHGIKVI VHMLSHEEAAEQP >Mature_93_residues MHPAVEQIRQYLQLIALQFVQHPEQAELRVAESPQGDAVRFRLILEKTDVARIIGRNGMTASAIRSLAKAAGEKHGIKVI VHMLSHEEAAEQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10345; Mature: 10345
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPAVEQIRQYLQLIALQFVQHPEQAELRVAESPQGDAVRFRLILEKTDVARIIGRNGMT CCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEHHHHHHHHHHHHHCCCCCC ASAIRSLAKAAGEKHGIKVIVHMLSHEEAAEQP HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MHPAVEQIRQYLQLIALQFVQHPEQAELRVAESPQGDAVRFRLILEKTDVARIIGRNGMT CCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEHHHHHHHHHHHHHCCCCCC ASAIRSLAKAAGEKHGIKVIVHMLSHEEAAEQP HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA