Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736303
Identifier: 187736303
GI number: 187736303
Start: 2204511
End: 2205461
Strand: Reverse
Name: 187736303
Synonym: Amuc_1816
Alternate gene names: NA
Gene position: 2205461-2204511 (Counterclockwise)
Preceding gene: 187736307
Following gene: 187736300
Centisome position: 82.78
GC content: 59.83
Gene sequence:
>951_bases GTGTTTTACCATGAATATTCTTTAACAGCCTGCGGCCCTCTGAACGCCAGAGCCGCGGAAGTGTGCAGGAAGGGAGCCCT CATTAAAACGGATGAAGGCGGGTACGGCTGCATCCAGCCGTGGCCGGAACTGGGAGACGCCACCCTGCAAGAGGAATTGG ACGCGCTCAGGAAGGGCCGCCCTCTGCCTCTGGGCGTCCGCGCCGCGGAGTGCGCCCGAACGGACGGGGAAGCACGCGCG AGGGGCGTCAGCCTGTTTGACGGTCTTCACATTCCGGAAAGCCACGCCACGCTGCCCTCCTGCGTCAGCCCCGCTACCAT TCGCATCATGGAATCCAAGGGATTCAAGGCAGGAAAAATCAAGGCCAGCGCCAATCTGGCCGCCGCCCTAGAACGGCTGA CGATGCTGGCATCCATGGTTCCCTCCTGGCGCTGGCGGCTGGACTTCAACGGATGCCTGAATGAAAACGATGCCCTGAAA TTCTGGAAATCCCTGCCCCACCATCTGAAAACCAGAATAGACTTCATAGAAGACCCGTGCCCCTTCTCCATCCAGAGCTG GGAACGTCTGGTAGACGCCGGCATGCCTCTGGCCCTGGACATGGGTTCGGATGTGGAACACCAGCCGGCCATCTCCTCGG ACCTGCCCATCATCCGCATCGTCAAACCCGCACGGGAAGCAACGCCGGAATATCTTTACGAACCTCCCGTCTTCACCACT GTCATGGATCACCCCGTAGGGCAGCTCTGGGCCGTTTACCAGGCGGCGGAATATTACCGCAACTCCCTGCCCACGGAAAT TCCCCTCTGCGGCCTCTGCACCCACCTCCTGTTTGAGCCGGACCCCTTTATAGACCGGATGGGAGGCATGGACCCTCAGG CAGCTGTTCCTGGAGGCACGGGGCTCGGCTTTGACGAACTATTGGAACATATTCCCTGGAAAATACTGTGA
Upstream 100 bases:
>100_bases TCTGTACATGACGCAGAGCTTAGACGTTTCACCCTCCAAAATCCAATGAAAACCTTTTTTCATCGTGACAAAAGAAGGAA AGGTTGTTTGAATTAAAGTT
Downstream 100 bases:
>100_bases CAATACAGGATTACCCTGCTCCATTGAATCTACAATGAAGGGGCTCTTCCCGTGCCGGAACTGGACTCGGCTTCCCTTGG CCTGCCGGGACTTGCCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MFYHEYSLTACGPLNARAAEVCRKGALIKTDEGGYGCIQPWPELGDATLQEELDALRKGRPLPLGVRAAECARTDGEARA RGVSLFDGLHIPESHATLPSCVSPATIRIMESKGFKAGKIKASANLAAALERLTMLASMVPSWRWRLDFNGCLNENDALK FWKSLPHHLKTRIDFIEDPCPFSIQSWERLVDAGMPLALDMGSDVEHQPAISSDLPIIRIVKPAREATPEYLYEPPVFTT VMDHPVGQLWAVYQAAEYYRNSLPTEIPLCGLCTHLLFEPDPFIDRMGGMDPQAAVPGGTGLGFDELLEHIPWKIL
Sequences:
>Translated_316_residues MFYHEYSLTACGPLNARAAEVCRKGALIKTDEGGYGCIQPWPELGDATLQEELDALRKGRPLPLGVRAAECARTDGEARA RGVSLFDGLHIPESHATLPSCVSPATIRIMESKGFKAGKIKASANLAAALERLTMLASMVPSWRWRLDFNGCLNENDALK FWKSLPHHLKTRIDFIEDPCPFSIQSWERLVDAGMPLALDMGSDVEHQPAISSDLPIIRIVKPAREATPEYLYEPPVFTT VMDHPVGQLWAVYQAAEYYRNSLPTEIPLCGLCTHLLFEPDPFIDRMGGMDPQAAVPGGTGLGFDELLEHIPWKIL >Mature_316_residues MFYHEYSLTACGPLNARAAEVCRKGALIKTDEGGYGCIQPWPELGDATLQEELDALRKGRPLPLGVRAAECARTDGEARA RGVSLFDGLHIPESHATLPSCVSPATIRIMESKGFKAGKIKASANLAAALERLTMLASMVPSWRWRLDFNGCLNENDALK FWKSLPHHLKTRIDFIEDPCPFSIQSWERLVDAGMPLALDMGSDVEHQPAISSDLPIIRIVKPAREATPEYLYEPPVFTT VMDHPVGQLWAVYQAAEYYRNSLPTEIPLCGLCTHLLFEPDPFIDRMGGMDPQAAVPGGTGLGFDELLEHIPWKIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34922; Mature: 34922
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFYHEYSLTACGPLNARAAEVCRKGALIKTDEGGYGCIQPWPELGDATLQEELDALRKGR CCEECCCCEECCCCCHHHHHHHHCCCEEEECCCCCCCCCCCHHCCHHHHHHHHHHHHCCC PLPLGVRAAECARTDGEARARGVSLFDGLHIPESHATLPSCVSPATIRIMESKGFKAGKI CCCCCCHHHHHHCCCCHHHHCCHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEE KASANLAAALERLTMLASMVPSWRWRLDFNGCLNENDALKFWKSLPHHLKTRIDFIEDPC ECHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC PFSIQSWERLVDAGMPLALDMGSDVEHQPAISSDLPIIRIVKPAREATPEYLYEPPVFTT CCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEECCHHHCCHHHHCCCCCHHH VMDHPVGQLWAVYQAAEYYRNSLPTEIPLCGLCTHLLFEPDPFIDRMGGMDPQAAVPGGT HHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCC GLGFDELLEHIPWKIL CCCHHHHHHHCCCCCC >Mature Secondary Structure MFYHEYSLTACGPLNARAAEVCRKGALIKTDEGGYGCIQPWPELGDATLQEELDALRKGR CCEECCCCEECCCCCHHHHHHHHCCCEEEECCCCCCCCCCCHHCCHHHHHHHHHHHHCCC PLPLGVRAAECARTDGEARARGVSLFDGLHIPESHATLPSCVSPATIRIMESKGFKAGKI CCCCCCHHHHHHCCCCHHHHCCHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEE KASANLAAALERLTMLASMVPSWRWRLDFNGCLNENDALKFWKSLPHHLKTRIDFIEDPC ECHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC PFSIQSWERLVDAGMPLALDMGSDVEHQPAISSDLPIIRIVKPAREATPEYLYEPPVFTT CCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEECCHHHCCHHHHCCCCCHHH VMDHPVGQLWAVYQAAEYYRNSLPTEIPLCGLCTHLLFEPDPFIDRMGGMDPQAAVPGGT HHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCC GLGFDELLEHIPWKIL CCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA