Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is mepA [H]
Identifier: 187736300
GI number: 187736300
Start: 2199958
End: 2201343
Strand: Reverse
Name: mepA [H]
Synonym: Amuc_1813
Alternate gene names: 187736300
Gene position: 2201343-2199958 (Counterclockwise)
Preceding gene: 187736303
Following gene: 187736299
Centisome position: 82.63
GC content: 58.95
Gene sequence:
>1386_bases ATGGCAGCCCAGTCACGCAACATCGCAGAATTGGAAAACGCATCCGTATGGCGTCTGCTGATCCAGTACTCCCTGCCCTC CATCGCCGGCATGGTGGTATACTCCCTGTACAACATCATTGACAGCGTGTTTATCGGTCACGGCGTGGGGCCTCTGGCCC TGTCCGGCCTGGCCGTCACCTTCCCCATCATGAACCTGACTTTCGCCCTGGGCACGCTGGTAGGCATCGGCGGGGCGGCC ATCAGCTCCATCCGGCTGGGAAGAAAAGACCAGGAAGGAACTGAGCGTACGCTTGGCAACGTCCTCATCATGAGTCTGAT TGCCGCTGTGGTGCTGGTGATTCCCACGCTTCTTTTCCTTACGGAAATCCTGACCGCCTTCGGCGCCAGCGGGCAAACCC TCACCTATGCGTACGACTTCATGCTTATTACCTTGCTGGGCCTGCCCGTCACGTACGTCTTCTTCAACCTCAATCATGTG ATGAGAGCTACCGGCTACCCTAAAAAAGCCATGGGCTCCACCCTTCTTTCCGTAGGAATCAACATCATTCTGGCTCCCAT CTTCATCTTCTGGTTCAAATGGGGCATTACCGGAGCAGCCGTGGCCACCCTTCTCGCCCAGGTCGTCGGCATGGTGCGCG TGCTGTTACACTTTTCCGATGCGGCCAGCACGGTCCACTTCCGCCGCGGCATCTGGCAGCTGCGCAAGACCATCGTCACC GGCATCCTGTCCATCGGGATGGCTCCCTGCCTGGTAAACGTCTGCGGCAGCGCGGTCACCGTCGCCATCAACAGGCAACT TGCGGATCACGGGGGGGACCTGGCCATCGGGGCCTACGGCATCATCAACCGCATTCTTATTCTGTTCGCCATGCTCGTCA TCGGCCTCACTCAGGGAATGCAGCCCATCATCGGCTACAACCACGGAGCCATGAAGCCGGGCCGCGTTCTGCTCACCCTT AAATACGGAGTTCTGGCAGGGACATCCTTCACCACGCTGGGATTCCTGGCCTGCGTCTTCTTTCCCCGCGGCATTGCCGG GCTCTTCACGGATGACGCCTCGCTCATCAGCCTGGCGGCCAACGGTCTGATCATCTGCGTGCTGGCCTTTCCGCTCATCG GCAGCCAGATCATCATCGGGAACTTCTTCCAGGCCATTGGAAAAGCCCGTCTGGCAATCTTCCTGTCCCTGACGCGCCAA ATGCTCTTCCTCCTGCCGTTCCTGCTGGTCCTGCCCCGTTTCTGGGGACAGGACGGAGTCTGGGCATCCCTTCCTCTGGC AGACGTGCTTTCCTTTATCGTCACCCTGCTCTTCATCCGCCGGTTCCTGAAATACTACCGGCTGAAAAACAGGCACTACC TGGTTCCCGGCACGGGAAAGGCATAA
Upstream 100 bases:
>100_bases AAACTGGGGGAAAAAGGCCGTTTTCCGGACAGGTGGACAGCTTGACAACCCATCCGTGCGTTTTTATAGTTTGCCACCTG TTTTGAAAGGAGGAACGTCC
Downstream 100 bases:
>100_bases CCTTTCTCCCCACCTGTCTTACTTACACGAACCCTCGTTCCCGGCCCATTCTTTCCGGGGTGCGGCAGGGGGGAGTGAAA CCGCTTTTTCCCATCCTTCG
Product: MATE efflux family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MAAQSRNIAELENASVWRLLIQYSLPSIAGMVVYSLYNIIDSVFIGHGVGPLALSGLAVTFPIMNLTFALGTLVGIGGAA ISSIRLGRKDQEGTERTLGNVLIMSLIAAVVLVIPTLLFLTEILTAFGASGQTLTYAYDFMLITLLGLPVTYVFFNLNHV MRATGYPKKAMGSTLLSVGINIILAPIFIFWFKWGITGAAVATLLAQVVGMVRVLLHFSDAASTVHFRRGIWQLRKTIVT GILSIGMAPCLVNVCGSAVTVAINRQLADHGGDLAIGAYGIINRILILFAMLVIGLTQGMQPIIGYNHGAMKPGRVLLTL KYGVLAGTSFTTLGFLACVFFPRGIAGLFTDDASLISLAANGLIICVLAFPLIGSQIIIGNFFQAIGKARLAIFLSLTRQ MLFLLPFLLVLPRFWGQDGVWASLPLADVLSFIVTLLFIRRFLKYYRLKNRHYLVPGTGKA
Sequences:
>Translated_461_residues MAAQSRNIAELENASVWRLLIQYSLPSIAGMVVYSLYNIIDSVFIGHGVGPLALSGLAVTFPIMNLTFALGTLVGIGGAA ISSIRLGRKDQEGTERTLGNVLIMSLIAAVVLVIPTLLFLTEILTAFGASGQTLTYAYDFMLITLLGLPVTYVFFNLNHV MRATGYPKKAMGSTLLSVGINIILAPIFIFWFKWGITGAAVATLLAQVVGMVRVLLHFSDAASTVHFRRGIWQLRKTIVT GILSIGMAPCLVNVCGSAVTVAINRQLADHGGDLAIGAYGIINRILILFAMLVIGLTQGMQPIIGYNHGAMKPGRVLLTL KYGVLAGTSFTTLGFLACVFFPRGIAGLFTDDASLISLAANGLIICVLAFPLIGSQIIIGNFFQAIGKARLAIFLSLTRQ MLFLLPFLLVLPRFWGQDGVWASLPLADVLSFIVTLLFIRRFLKYYRLKNRHYLVPGTGKA >Mature_460_residues AAQSRNIAELENASVWRLLIQYSLPSIAGMVVYSLYNIIDSVFIGHGVGPLALSGLAVTFPIMNLTFALGTLVGIGGAAI SSIRLGRKDQEGTERTLGNVLIMSLIAAVVLVIPTLLFLTEILTAFGASGQTLTYAYDFMLITLLGLPVTYVFFNLNHVM RATGYPKKAMGSTLLSVGINIILAPIFIFWFKWGITGAAVATLLAQVVGMVRVLLHFSDAASTVHFRRGIWQLRKTIVTG ILSIGMAPCLVNVCGSAVTVAINRQLADHGGDLAIGAYGIINRILILFAMLVIGLTQGMQPIIGYNHGAMKPGRVLLTLK YGVLAGTSFTTLGFLACVFFPRGIAGLFTDDASLISLAANGLIICVLAFPLIGSQIIIGNFFQAIGKARLAIFLSLTRQM LFLLPFLLVLPRFWGQDGVWASLPLADVLSFIVTLLFIRRFLKYYRLKNRHYLVPGTGKA
Specific function: Multidrug resistance efflux protein [H]
COG id: COG0534
COG function: function code V; Na+-driven multidrug efflux pump
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family. MepA subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002528 - InterPro: IPR015522 [H]
Pfam domain/function: PF01554 MatE [H]
EC number: NA
Molecular weight: Translated: 49731; Mature: 49600
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAQSRNIAELENASVWRLLIQYSLPSIAGMVVYSLYNIIDSVFIGHGVGPLALSGLAVT CCCCCCCHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH FPIMNLTFALGTLVGIGGAAISSIRLGRKDQEGTERTLGNVLIMSLIAAVVLVIPTLLFL HHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TEILTAFGASGQTLTYAYDFMLITLLGLPVTYVFFNLNHVMRATGYPKKAMGSTLLSVGI HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH NIILAPIFIFWFKWGITGAAVATLLAQVVGMVRVLLHFSDAASTVHFRRGIWQLRKTIVT HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GILSIGMAPCLVNVCGSAVTVAINRQLADHGGDLAIGAYGIINRILILFAMLVIGLTQGM HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCC QPIIGYNHGAMKPGRVLLTLKYGVLAGTSFTTLGFLACVFFPRGIAGLFTDDASLISLAA CHHHCCCCCCCCCCCEEEEEEHHHHCCCHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHH NGLIICVLAFPLIGSQIIIGNFFQAIGKARLAIFLSLTRQMLFLLPFLLVLPRFWGQDGV CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC WASLPLADVLSFIVTLLFIRRFLKYYRLKNRHYLVPGTGKA EECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCC >Mature Secondary Structure AAQSRNIAELENASVWRLLIQYSLPSIAGMVVYSLYNIIDSVFIGHGVGPLALSGLAVT CCCCCCHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH FPIMNLTFALGTLVGIGGAAISSIRLGRKDQEGTERTLGNVLIMSLIAAVVLVIPTLLFL HHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TEILTAFGASGQTLTYAYDFMLITLLGLPVTYVFFNLNHVMRATGYPKKAMGSTLLSVGI HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH NIILAPIFIFWFKWGITGAAVATLLAQVVGMVRVLLHFSDAASTVHFRRGIWQLRKTIVT HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GILSIGMAPCLVNVCGSAVTVAINRQLADHGGDLAIGAYGIINRILILFAMLVIGLTQGM HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCC QPIIGYNHGAMKPGRVLLTLKYGVLAGTSFTTLGFLACVFFPRGIAGLFTDDASLISLAA CHHHCCCCCCCCCCCEEEEEEHHHHCCCHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHH NGLIICVLAFPLIGSQIIIGNFFQAIGKARLAIFLSLTRQMLFLLPFLLVLPRFWGQDGV CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC WASLPLADVLSFIVTLLFIRRFLKYYRLKNRHYLVPGTGKA EECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA