Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is gatC
Identifier: 187736270
GI number: 187736270
Start: 2171867
End: 2172160
Strand: Reverse
Name: gatC
Synonym: Amuc_1783
Alternate gene names: 187736270
Gene position: 2172160-2171867 (Counterclockwise)
Preceding gene: 187736271
Following gene: 187736269
Centisome position: 81.53
GC content: 57.14
Gene sequence:
>294_bases ATGAGCACGCCCCAAATAGACGTAGCCTACATTGCCAAGCTGGCACGCATTGACCTGACGGAGGAAGAAACAGCTCTCTT CTCCAAGGATCTGGACAAAGTCCTGGCCTATATCACCAAGCTGGAATCCTACGATGTCACGGGCATCGCCCCCATGAACC ATCCTCTCCCGGCAATGGACGTGATGCGCGAAGACATTCCTGAAACCGGCTTCACCCAGGAAGAAGCCCTCTCCAATGCC CCCCAGCAGTCCCAGGGGCAATTCCGCACGCCCAAGGTGGTGGAATCCGCCTGA
Upstream 100 bases:
>100_bases CTGATCTGCGCCATCGCCGTTTCCTTCTGCTGGATCGTCCGCCTGCTGGAACAACAGTAGGCAGCCCCCTTTCTTTTCCG CATTTTTTCTACATTACACC
Downstream 100 bases:
>100_bases TCCTCCCGCTTCCTTTTCCCTTCACCTTTCAACCGTCTTTACCCTTTCCTTCTCATGTCAAAAATTCAAGGCACCCTGGC CCAGTGGCGTGACCGCCTGC
Product: glutamyl-tRNA(Gln) amidotransferase, C subunit
Products: NA
Alternate protein names: Asp/Glu-ADT subunit C
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MSTPQIDVAYIAKLARIDLTEEETALFSKDLDKVLAYITKLESYDVTGIAPMNHPLPAMDVMREDIPETGFTQEEALSNA PQQSQGQFRTPKVVESA
Sequences:
>Translated_97_residues MSTPQIDVAYIAKLARIDLTEEETALFSKDLDKVLAYITKLESYDVTGIAPMNHPLPAMDVMREDIPETGFTQEEALSNA PQQSQGQFRTPKVVESA >Mature_96_residues STPQIDVAYIAKLARIDLTEEETALFSKDLDKVLAYITKLESYDVTGIAPMNHPLPAMDVMREDIPETGFTQEEALSNAP QQSQGQFRTPKVVESA
Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take
COG id: COG0721
COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gatC family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GATC_AKKM8 (B2UMP5)
Other databases:
- EMBL: CP001071 - RefSeq: YP_001878382.1 - ProteinModelPortal: B2UMP5 - SMR: B2UMP5 - GeneID: 6275630 - GenomeReviews: CP001071_GR - KEGG: amu:Amuc_1783 - HOGENOM: HBG586403 - OMA: MFVAPRI - GO: GO:0006412 - HAMAP: MF_00122 - InterPro: IPR003837 - TIGRFAMs: TIGR00135
Pfam domain/function: PF02686 Glu-tRNAGln
EC number: 6.3.5.-
Molecular weight: Translated: 10757; Mature: 10626
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPQIDVAYIAKLARIDLTEEETALFSKDLDKVLAYITKLESYDVTGIAPMNHPLPAMD CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH VMREDIPETGFTQEEALSNAPQQSQGQFRTPKVVESA HHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure STPQIDVAYIAKLARIDLTEEETALFSKDLDKVLAYITKLESYDVTGIAPMNHPLPAMD CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH VMREDIPETGFTQEEALSNAPQQSQGQFRTPKVVESA HHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA