Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736271
Identifier: 187736271
GI number: 187736271
Start: 2172201
End: 2172533
Strand: Reverse
Name: 187736271
Synonym: Amuc_1784
Alternate gene names: NA
Gene position: 2172533-2172201 (Counterclockwise)
Preceding gene: 187736272
Following gene: 187736270
Centisome position: 81.55
GC content: 59.46
Gene sequence:
>333_bases ATGATTAAAAGAAAAACCAAACGCCGTTCCTCCGAACTGGCAGAACTGGATCGCGCCTCACGGGAAATTGAGAGCCGTAT TCAGGAATTGGAAGCCTCTCTCAAACGCCCGTCCCAGCAGACCCGCATGCGCCTGGACCGCAATACCATGCCGCCTCCCG ACCGCGTTCGGGAGGGCAACCAGAACCGGGCACTGCGTGCCGTAGTGGCCCGTGACGGACGCGCCACCAACATGAGGCGG GAACTGCGAGAAAACTTCATGCTGCTGGGCCTACTGATCTGCGCCATCGCCGTTTCCTTCTGCTGGATCGTCCGCCTGCT GGAACAACAGTAG
Upstream 100 bases:
>100_bases TCATGACCCAGTTCCTCCAGGGCCTTTCCTTCCATCTTCCCCTGCTCCTGATTGCCCTCATCATCCTCTTTTTCATCTGG ATTTTCAGCCCTTCCGCATC
Downstream 100 bases:
>100_bases GCAGCCCCCTTTCTTTTCCGCATTTTTTCTACATTACACCATGAGCACGCCCCAAATAGACGTAGCCTACATTGCCAAGC TGGCACGCATTGACCTGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MIKRKTKRRSSELAELDRASREIESRIQELEASLKRPSQQTRMRLDRNTMPPPDRVREGNQNRALRAVVARDGRATNMRR ELRENFMLLGLLICAIAVSFCWIVRLLEQQ
Sequences:
>Translated_110_residues MIKRKTKRRSSELAELDRASREIESRIQELEASLKRPSQQTRMRLDRNTMPPPDRVREGNQNRALRAVVARDGRATNMRR ELRENFMLLGLLICAIAVSFCWIVRLLEQQ >Mature_110_residues MIKRKTKRRSSELAELDRASREIESRIQELEASLKRPSQQTRMRLDRNTMPPPDRVREGNQNRALRAVVARDGRATNMRR ELRENFMLLGLLICAIAVSFCWIVRLLEQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12947; Mature: 12947
Theoretical pI: Translated: 11.81; Mature: 11.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKRKTKRRSSELAELDRASREIESRIQELEASLKRPSQQTRMRLDRNTMPPPDRVREGN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHCCC QNRALRAVVARDGRATNMRRELRENFMLLGLLICAIAVSFCWIVRLLEQQ CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIKRKTKRRSSELAELDRASREIESRIQELEASLKRPSQQTRMRLDRNTMPPPDRVREGN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHCCC QNRALRAVVARDGRATNMRRELRENFMLLGLLICAIAVSFCWIVRLLEQQ CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA