Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is gatA

Identifier: 187736269

GI number: 187736269

Start: 2170400

End: 2171812

Strand: Reverse

Name: gatA

Synonym: Amuc_1782

Alternate gene names: 187736269

Gene position: 2171812-2170400 (Counterclockwise)

Preceding gene: 187736270

Following gene: 187736268

Centisome position: 81.52

GC content: 62.77

Gene sequence:

>1413_bases
ATGTCAAAAATTCAAGGCACCCTGGCCCAGTGGCGTGACCGCCTGCGCCGCAAGGAACTCTCCCCTGCCGAACTGGTCAA
CCTGACGGCGGACGCCATTGAGGCGGACCGGACAACCAACGCCTACATCTCCTTTGACCGTGAAGCAGCCCTCCACGCCG
CGGCCGGAGCGGATATTTCCAGCCCCCTGGCTGGCATCCCCATCGCCGTGAAGGACAATATTAATGTCCTGGGCCAGCCG
ACGCGCTGCGCCTCCCGCCTTCTTTCCCCTTATGTCGCTCCTTATGACGCCACCTCCATCCGCCTGCTGAAGGAGGCGGG
CGGCATCCCGCTGGGCCGCACGAACATGGATGAATTCGCCATGGGTGCCAGCGGAGAAAACTCTGCTTACGGCATCACGC
GCAACCCGGAAGCCCCGGACCGCATTCCCGGAGGCTCCTCCAGCGGCTCTGCCGCCGCCGTCGCATCCGCTACCGCCATT
GCCGCACTCGGTTCCGACACGGGCGGCTCCATCCGGCAGCCGGCCGGGCACTGCGGCATCGTGGGCCTCAAGCCTACCTA
CGGGCGCGTTTCCCGCTACGGACTGGTAGCCTTTGCCTCTTCCCTGGACCAGATCGGCCCCATGACCCGGACAGTGGAAG
ACGCCGCCATCCTGCTCCAGGCCATCTCCGGACACGACCGTAAAGACTCCACATCCGCAAACTGCCCCGTGCCGGACTTT
GAAGCTGCGCTGGGCCGTGACGTCAAAGGGCTAAAAGTGGGCATCCCTTCGGAATACTTTACCTCCGGCAACCATCCGGG
CATTTCCGAGGCAGTGCAAAACACCGTCAAACAGCTGGAAAGCCTGGGAGCGGAGCTGGTGGAAGTCAACCTGCCCCACG
CGGATGCCGTCGTCGCCGCCTACTATATCATCGCCTGCGCGGAAGCGTCTTCCAACCTCTCCCGGTTTGACGGCGTGCGC
TACGGAAAGAGGGCGGAAGACGCCGCCGGACTGGTGGAACTCTTCTCACGCACCCGTGAAGAGGGATTCGGGCCGGAAGT
CAAGCGCCGCATCATCCTGGGCACCTACGTGCTCAGCTCCGGTTACTATGACGCTTACTACTCCCGCGCTCAAAAAGTCC
GCTCCCTGGTCGCCAGAGATTTCGCGGAAGCCTTCTCCAGGGTGGATATCATCGTAGGCCCCACCTCGCCCGCTCCCGCT
CCCAAAATCGGAGATTCCGCGCTGGATCACCTCCAGACCTATCTGGCGGACATCTACACGATCCCCGCCAACCTGGCCGG
CCTCCCCGCCATGTCCATTCCCTGCGGAACCGTCAGGGAAAGCGGCATGGAACTTCCCGTGGGCTTTCAGATGATGGCTC
CCCATTTCCGGGAAGACCTCCTGTTGAAAACCGGATTTGCCCTTGGGAAATAA

Upstream 100 bases:

>100_bases
GTCCCAGGGGCAATTCCGCACGCCCAAGGTGGTGGAATCCGCCTGATCCTCCCGCTTCCTTTTCCCTTCACCTTTCAACC
GTCTTTACCCTTTCCTTCTC

Downstream 100 bases:

>100_bases
TAGGATTTTTTCAACGTAAGTGCCCGGCATACTGTCTCACCCGCTATCAGAATCATGGACACCCGAGAATTCAACGAAAT
TATCGCCGCGAACTCATCGT

Product: glutamyl-tRNA(Gln) amidotransferase, A subunit

Products: NA

Alternate protein names: Glu-ADT subunit A

Number of amino acids: Translated: 470; Mature: 469

Protein sequence:

>470_residues
MSKIQGTLAQWRDRLRRKELSPAELVNLTADAIEADRTTNAYISFDREAALHAAAGADISSPLAGIPIAVKDNINVLGQP
TRCASRLLSPYVAPYDATSIRLLKEAGGIPLGRTNMDEFAMGASGENSAYGITRNPEAPDRIPGGSSSGSAAAVASATAI
AALGSDTGGSIRQPAGHCGIVGLKPTYGRVSRYGLVAFASSLDQIGPMTRTVEDAAILLQAISGHDRKDSTSANCPVPDF
EAALGRDVKGLKVGIPSEYFTSGNHPGISEAVQNTVKQLESLGAELVEVNLPHADAVVAAYYIIACAEASSNLSRFDGVR
YGKRAEDAAGLVELFSRTREEGFGPEVKRRIILGTYVLSSGYYDAYYSRAQKVRSLVARDFAEAFSRVDIIVGPTSPAPA
PKIGDSALDHLQTYLADIYTIPANLAGLPAMSIPCGTVRESGMELPVGFQMMAPHFREDLLLKTGFALGK

Sequences:

>Translated_470_residues
MSKIQGTLAQWRDRLRRKELSPAELVNLTADAIEADRTTNAYISFDREAALHAAAGADISSPLAGIPIAVKDNINVLGQP
TRCASRLLSPYVAPYDATSIRLLKEAGGIPLGRTNMDEFAMGASGENSAYGITRNPEAPDRIPGGSSSGSAAAVASATAI
AALGSDTGGSIRQPAGHCGIVGLKPTYGRVSRYGLVAFASSLDQIGPMTRTVEDAAILLQAISGHDRKDSTSANCPVPDF
EAALGRDVKGLKVGIPSEYFTSGNHPGISEAVQNTVKQLESLGAELVEVNLPHADAVVAAYYIIACAEASSNLSRFDGVR
YGKRAEDAAGLVELFSRTREEGFGPEVKRRIILGTYVLSSGYYDAYYSRAQKVRSLVARDFAEAFSRVDIIVGPTSPAPA
PKIGDSALDHLQTYLADIYTIPANLAGLPAMSIPCGTVRESGMELPVGFQMMAPHFREDLLLKTGFALGK
>Mature_469_residues
SKIQGTLAQWRDRLRRKELSPAELVNLTADAIEADRTTNAYISFDREAALHAAAGADISSPLAGIPIAVKDNINVLGQPT
RCASRLLSPYVAPYDATSIRLLKEAGGIPLGRTNMDEFAMGASGENSAYGITRNPEAPDRIPGGSSSGSAAAVASATAIA
ALGSDTGGSIRQPAGHCGIVGLKPTYGRVSRYGLVAFASSLDQIGPMTRTVEDAAILLQAISGHDRKDSTSANCPVPDFE
AALGRDVKGLKVGIPSEYFTSGNHPGISEAVQNTVKQLESLGAELVEVNLPHADAVVAAYYIIACAEASSNLSRFDGVRY
GKRAEDAAGLVELFSRTREEGFGPEVKRRIILGTYVLSSGYYDAYYSRAQKVRSLVARDFAEAFSRVDIIVGPTSPAPAP
KIGDSALDHLQTYLADIYTIPANLAGLPAMSIPCGTVRESGMELPVGFQMMAPHFREDLLLKTGFALGK

Specific function: Furnishes a means for formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu- tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activa

COG id: COG0154

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amidase family

Homologues:

Organism=Homo sapiens, GI222831590, Length=484, Percent_Identity=37.8099173553719, Blast_Score=306, Evalue=4e-83,
Organism=Homo sapiens, GI195972892, Length=480, Percent_Identity=25, Blast_Score=112, Evalue=6e-25,
Organism=Homo sapiens, GI166795287, Length=298, Percent_Identity=32.8859060402685, Blast_Score=98, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17543272, Length=432, Percent_Identity=38.1944444444444, Blast_Score=255, Evalue=3e-68,
Organism=Caenorhabditis elegans, GI71990152, Length=323, Percent_Identity=29.4117647058824, Blast_Score=112, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17538252, Length=509, Percent_Identity=24.75442043222, Blast_Score=109, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17556264, Length=274, Percent_Identity=29.9270072992701, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17537465, Length=232, Percent_Identity=32.3275862068966, Blast_Score=100, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17538254, Length=301, Percent_Identity=26.9102990033223, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17556276, Length=283, Percent_Identity=30.0353356890459, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17556278, Length=276, Percent_Identity=30.4347826086957, Blast_Score=82, Evalue=4e-16,
Organism=Saccharomyces cerevisiae, GI6323950, Length=416, Percent_Identity=36.2980769230769, Blast_Score=231, Evalue=1e-61,
Organism=Saccharomyces cerevisiae, GI6319685, Length=443, Percent_Identity=29.3453724604966, Blast_Score=112, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6320448, Length=467, Percent_Identity=23.982869379015, Blast_Score=79, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24648113, Length=470, Percent_Identity=40.8510638297872, Blast_Score=303, Evalue=1e-82,
Organism=Drosophila melanogaster, GI24644968, Length=502, Percent_Identity=27.4900398406374, Blast_Score=128, Evalue=9e-30,
Organism=Drosophila melanogaster, GI24652985, Length=479, Percent_Identity=27.1398747390397, Blast_Score=119, Evalue=6e-27,
Organism=Drosophila melanogaster, GI19922090, Length=479, Percent_Identity=27.1398747390397, Blast_Score=119, Evalue=6e-27,
Organism=Drosophila melanogaster, GI24652981, Length=479, Percent_Identity=27.1398747390397, Blast_Score=119, Evalue=6e-27,
Organism=Drosophila melanogaster, GI24652983, Length=479, Percent_Identity=27.1398747390397, Blast_Score=119, Evalue=6e-27,
Organism=Drosophila melanogaster, GI161078093, Length=507, Percent_Identity=26.8244575936884, Blast_Score=105, Evalue=7e-23,
Organism=Drosophila melanogaster, GI45550774, Length=198, Percent_Identity=35.3535353535354, Blast_Score=100, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24648435, Length=198, Percent_Identity=35.3535353535354, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24648437, Length=198, Percent_Identity=35.3535353535354, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24648441, Length=168, Percent_Identity=39.2857142857143, Blast_Score=99, Evalue=8e-21,
Organism=Drosophila melanogaster, GI24648439, Length=168, Percent_Identity=39.2857142857143, Blast_Score=99, Evalue=8e-21,
Organism=Drosophila melanogaster, GI21356731, Length=172, Percent_Identity=34.8837209302326, Blast_Score=92, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATA_AKKM8 (B2UMP4)

Other databases:

- EMBL:   CP001071
- RefSeq:   YP_001878381.1
- ProteinModelPortal:   B2UMP4
- SMR:   B2UMP4
- GeneID:   6275761
- GenomeReviews:   CP001071_GR
- KEGG:   amu:Amuc_1782
- HOGENOM:   HBG481888
- OMA:   RWGLIAF
- GO:   GO:0006412
- HAMAP:   MF_00120
- InterPro:   IPR000120
- InterPro:   IPR020556
- InterPro:   IPR004412
- Gene3D:   G3DSA:3.90.1300.10
- PANTHER:   PTHR11895
- TIGRFAMs:   TIGR00132

Pfam domain/function: PF01425 Amidase; SSF75304 Amidase_sig_enz

EC number: 6.3.5.-

Molecular weight: Translated: 49650; Mature: 49518

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: PS00571 AMIDASES

Important sites: ACT_SITE 71-71 ACT_SITE 146-146 ACT_SITE 170-170

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIQGTLAQWRDRLRRKELSPAELVNLTADAIEADRTTNAYISFDREAALHAAAGADIS
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHCCCCCC
SPLAGIPIAVKDNINVLGQPTRCASRLLSPYVAPYDATSIRLLKEAGGIPLGRTNMDEFA
CCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHH
MGASGENSAYGITRNPEAPDRIPGGSSSGSAAAVASATAIAALGSDTGGSIRQPAGHCGI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE
VGLKPTYGRVSRYGLVAFASSLDQIGPMTRTVEDAAILLQAISGHDRKDSTSANCPVPDF
EECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH
EAALGRDVKGLKVGIPSEYFTSGNHPGISEAVQNTVKQLESLGAELVEVNLPHADAVVAA
HHHHCCCCCCEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH
YYIIACAEASSNLSRFDGVRYGKRAEDAAGLVELFSRTREEGFGPEVKRRIILGTYVLSS
HHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
GYYDAYYSRAQKVRSLVARDFAEAFSRVDIIVGPTSPAPAPKIGDSALDHLQTYLADIYT
CCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
IPANLAGLPAMSIPCGTVRESGMELPVGFQMMAPHFREDLLLKTGFALGK
CCCHHCCCCCCCCCCHHHHHCCCCCCCCHHHHCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SKIQGTLAQWRDRLRRKELSPAELVNLTADAIEADRTTNAYISFDREAALHAAAGADIS
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHCCCCCC
SPLAGIPIAVKDNINVLGQPTRCASRLLSPYVAPYDATSIRLLKEAGGIPLGRTNMDEFA
CCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHH
MGASGENSAYGITRNPEAPDRIPGGSSSGSAAAVASATAIAALGSDTGGSIRQPAGHCGI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE
VGLKPTYGRVSRYGLVAFASSLDQIGPMTRTVEDAAILLQAISGHDRKDSTSANCPVPDF
EECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH
EAALGRDVKGLKVGIPSEYFTSGNHPGISEAVQNTVKQLESLGAELVEVNLPHADAVVAA
HHHHCCCCCCEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH
YYIIACAEASSNLSRFDGVRYGKRAEDAAGLVELFSRTREEGFGPEVKRRIILGTYVLSS
HHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
GYYDAYYSRAQKVRSLVARDFAEAFSRVDIIVGPTSPAPAPKIGDSALDHLQTYLADIYT
CCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
IPANLAGLPAMSIPCGTVRESGMELPVGFQMMAPHFREDLLLKTGFALGK
CCCHHCCCCCCCCCCHHHHHCCCCCCCCHHHHCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA