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The map label for this gene is glgB [H]

Identifier: 187736238

GI number: 187736238

Start: 2132696

End: 2134732

Strand: Direct

Name: glgB [H]

Synonym: Amuc_1751

Alternate gene names: 187736238

Gene position: 2132696-2134732 (Clockwise)

Preceding gene: 187736237

Following gene: 187736246

Centisome position: 80.05

GC content: 59.94

Gene sequence:

>2037_bases
ATGAGAAGACCCCCGATACCCGGCTTGGTGATGGCGGACGGATGGCTCCAGCCGTATTCCCGCCAGATACGCGACCGCCA
GCGTCTGTTTGACCTGAAAATGAAGAGGATCAATCAGCGCGCCGGCTCTCTGGAGGAATACGCGCGCGGATACCGCTATT
ACGGTTTCAACAGAGACGCGGAGACGGGGGCGTGGACATACCGGGAATGGGCTCCCGCCGCCCGCAGGGTGTCCCTGATT
GGGGATTTTAACGGCTGGAACCGGGAGAGCCACCCGCTGGAGCGGAATGAGCGCGGCGTGTGGGAAATTACGCTGCCGCC
TGATGCGCTGGCCCACGGGCAGAAGGTGAAGGTGCACGTGGTCGGTGCGGACGGCACGGGCAGAGATCGCATTCCCGCAT
GGATTACCAGGACCGTCCAGGATCCGACCACTTATGATTTTGCCGGGGAGATCTGGATGCCGGAACACCCCTATGAATGG
CGGAATAACGGTTTTGATCCCTCCCGGGTGGAAGTTCCGTTCGTGTATGAAGCGCATGTAGGCATGGGCGGGGAAGAAGG
GCGCGTGCATACGTACCGCGAGTTTGCGGACGAGGTTCTCCCCCGGATCGCCAGGCTGGGTTACAATACCGTCCAGCTGA
TGGCGATCCAGGAGCACCCCTATTACGGTTCCTTCGGCTACCACGTTTCTTCCTTTTTCGCCCCTTCCTCCCGTTTCGGC
GAGCCGGAGGACCTGAAGTACCTGATAGACCAGGCGCACGGCCTGGGCATCGCCGTGCTGCTGGACGTGGTGCATTCCCA
CGCCGTGAAGAACGAGGCGGAAGGGCTGAACAATTTTGACGGTTCCGGAGGCATGTATTTCCTGCCCGGGGAGCGCGGCC
GCCATCCGGACTGGGATTCCTGTTGTTTTGATTATGGCCGGGACGAGGTGATTGAATTCCTCCTGTCCAATGTCCGCTGG
TGGCTGGAAGAGTTCCGTTTTGACGGCTTCCGTTTTGACGGCGTGACATCTATGCTGTATTTCCACCGCGGGCATGAGCC
GTTCGGGGATTTGGGCGCCTACTTCGGCTCTTCCGTGGATCTGGATGCCGTGGCTTATCTGCAGCTGGCCGCCACGCTGA
TTCAGCGGGTGAAGCCGGGCGCCATAGCGATTGCTGAGGACATGTCCGGCATGCCGGGATTGTGCCGCCCGGTGGACGAA
GGGGGGATTGGTTTTTCCCACCGTCTGGCCATGGGCATTCCCGATTACTGGATTAAGCTGCTCAAGGAGAAAAAGGATGA
GGAATGGAGCATGGGCGATATGTGGCACACGCTGACCAACAGGCGCTACGGCGAGCCGCATGTGGCCTATTGCGAGAGCC
ATGACCAGGCCCTGGTGGGGGACAAGACTCTGGCGTTCCGCCTGATGGATGCGGAAATGTACTGGAAAATGGCCGTGGAC
CAGCAGAGCCTCATTATTGACCGCGGCATGGCGCTGCACAAGATGATCCGCCTGGTGACGTTGGCTACCGGGGGGGAAGG
CTGGCTGAATTTCATGGGCAACGAATTCGGGCATCCGGAATGGATTGATTTTCCGCGCGAAGGCAACGGCTGGTCTTACG
AATACTGCCGCCGCCAGTGGTCCCTGGTGGACAATCCTTCCCTCAGGTTCAAGTTCCTGAATGCCTTTGACCAGGCGATG
GTCCGCCTGGCGCAGGAAGCCCGCCTGCTGAATAATCCGCCGCCTTTCCCGCTTAATATTGACGAGACCAACCATGTCAT
GGCATTCCACCGCGGCGGTCTGTTGTTTGTGTTCAACTGGTCCGGAGACAGGGCTATCATGGATTACATGCTGCCCGTTC
CCCAGAAGGGGGAATGGCGGGTAGTGCTGGATACGGACAACGCCCGTTTCGGCGGTTTCGGGAGGCAGGATGTTTCCATG
CCGCATTTTACGGATGGGGAGGGGAATCTTTCCCTGTACCTGCTGCCGCGTACGGCCCTGGTCCTGAAGAGGGTAGGTTC
CGCCGTCATGGCCCGCCACCCGGGGCGGGAGGATTAG

Upstream 100 bases:

>100_bases
CCCGGGCGCGATTAAAGGGCCGCGCCCTTTTCTTCCCCCGCAGGGAGAAGCCCTTCTTTCTTCCTTGACCCTGCTGATTG
AGGAGGGGTATCATCAGATA

Downstream 100 bases:

>100_bases
CGTGCAATTCCAAAAACGGACGGTTTACTTATCCGTTCGTGAAAGGGAGCGTAGTGCGGGGCTGCGTACGGAACGCGGGA
TGGATATGCGCTGTTACTCC

Product: glycoside hydrolase family 13 domain protein

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE [H]

Number of amino acids: Translated: 678; Mature: 678

Protein sequence:

>678_residues
MRRPPIPGLVMADGWLQPYSRQIRDRQRLFDLKMKRINQRAGSLEEYARGYRYYGFNRDAETGAWTYREWAPAARRVSLI
GDFNGWNRESHPLERNERGVWEITLPPDALAHGQKVKVHVVGADGTGRDRIPAWITRTVQDPTTYDFAGEIWMPEHPYEW
RNNGFDPSRVEVPFVYEAHVGMGGEEGRVHTYREFADEVLPRIARLGYNTVQLMAIQEHPYYGSFGYHVSSFFAPSSRFG
EPEDLKYLIDQAHGLGIAVLLDVVHSHAVKNEAEGLNNFDGSGGMYFLPGERGRHPDWDSCCFDYGRDEVIEFLLSNVRW
WLEEFRFDGFRFDGVTSMLYFHRGHEPFGDLGAYFGSSVDLDAVAYLQLAATLIQRVKPGAIAIAEDMSGMPGLCRPVDE
GGIGFSHRLAMGIPDYWIKLLKEKKDEEWSMGDMWHTLTNRRYGEPHVAYCESHDQALVGDKTLAFRLMDAEMYWKMAVD
QQSLIIDRGMALHKMIRLVTLATGGEGWLNFMGNEFGHPEWIDFPREGNGWSYEYCRRQWSLVDNPSLRFKFLNAFDQAM
VRLAQEARLLNNPPPFPLNIDETNHVMAFHRGGLLFVFNWSGDRAIMDYMLPVPQKGEWRVVLDTDNARFGGFGRQDVSM
PHFTDGEGNLSLYLLPRTALVLKRVGSAVMARHPGRED

Sequences:

>Translated_678_residues
MRRPPIPGLVMADGWLQPYSRQIRDRQRLFDLKMKRINQRAGSLEEYARGYRYYGFNRDAETGAWTYREWAPAARRVSLI
GDFNGWNRESHPLERNERGVWEITLPPDALAHGQKVKVHVVGADGTGRDRIPAWITRTVQDPTTYDFAGEIWMPEHPYEW
RNNGFDPSRVEVPFVYEAHVGMGGEEGRVHTYREFADEVLPRIARLGYNTVQLMAIQEHPYYGSFGYHVSSFFAPSSRFG
EPEDLKYLIDQAHGLGIAVLLDVVHSHAVKNEAEGLNNFDGSGGMYFLPGERGRHPDWDSCCFDYGRDEVIEFLLSNVRW
WLEEFRFDGFRFDGVTSMLYFHRGHEPFGDLGAYFGSSVDLDAVAYLQLAATLIQRVKPGAIAIAEDMSGMPGLCRPVDE
GGIGFSHRLAMGIPDYWIKLLKEKKDEEWSMGDMWHTLTNRRYGEPHVAYCESHDQALVGDKTLAFRLMDAEMYWKMAVD
QQSLIIDRGMALHKMIRLVTLATGGEGWLNFMGNEFGHPEWIDFPREGNGWSYEYCRRQWSLVDNPSLRFKFLNAFDQAM
VRLAQEARLLNNPPPFPLNIDETNHVMAFHRGGLLFVFNWSGDRAIMDYMLPVPQKGEWRVVLDTDNARFGGFGRQDVSM
PHFTDGEGNLSLYLLPRTALVLKRVGSAVMARHPGRED
>Mature_678_residues
MRRPPIPGLVMADGWLQPYSRQIRDRQRLFDLKMKRINQRAGSLEEYARGYRYYGFNRDAETGAWTYREWAPAARRVSLI
GDFNGWNRESHPLERNERGVWEITLPPDALAHGQKVKVHVVGADGTGRDRIPAWITRTVQDPTTYDFAGEIWMPEHPYEW
RNNGFDPSRVEVPFVYEAHVGMGGEEGRVHTYREFADEVLPRIARLGYNTVQLMAIQEHPYYGSFGYHVSSFFAPSSRFG
EPEDLKYLIDQAHGLGIAVLLDVVHSHAVKNEAEGLNNFDGSGGMYFLPGERGRHPDWDSCCFDYGRDEVIEFLLSNVRW
WLEEFRFDGFRFDGVTSMLYFHRGHEPFGDLGAYFGSSVDLDAVAYLQLAATLIQRVKPGAIAIAEDMSGMPGLCRPVDE
GGIGFSHRLAMGIPDYWIKLLKEKKDEEWSMGDMWHTLTNRRYGEPHVAYCESHDQALVGDKTLAFRLMDAEMYWKMAVD
QQSLIIDRGMALHKMIRLVTLATGGEGWLNFMGNEFGHPEWIDFPREGNGWSYEYCRRQWSLVDNPSLRFKFLNAFDQAM
VRLAQEARLLNNPPPFPLNIDETNHVMAFHRGGLLFVFNWSGDRAIMDYMLPVPQKGEWRVVLDTDNARFGGFGRQDVSM
PHFTDGEGNLSLYLLPRTALVLKRVGSAVMARHPGRED

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position [H]

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=676, Percent_Identity=50.1479289940828, Blast_Score=652, Evalue=0.0,
Organism=Escherichia coli, GI1789839, Length=661, Percent_Identity=29.1981845688351, Blast_Score=196, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI17554896, Length=679, Percent_Identity=47.2754050073638, Blast_Score=610, Evalue=1e-174,
Organism=Caenorhabditis elegans, GI32564391, Length=602, Percent_Identity=48.671096345515, Blast_Score=563, Evalue=1e-160,
Organism=Saccharomyces cerevisiae, GI6320826, Length=694, Percent_Identity=48.9913544668588, Blast_Score=613, Evalue=1e-176,
Organism=Drosophila melanogaster, GI28573410, Length=679, Percent_Identity=48.7481590574374, Blast_Score=629, Evalue=1e-180,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48 [H]

EC number: =2.4.1.18 [H]

Molecular weight: Translated: 77762; Mature: 77762

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRPPIPGLVMADGWLQPYSRQIRDRQRLFDLKMKRINQRAGSLEEYARGYRYYGFNRDA
CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEECCCCCC
ETGAWTYREWAPAARRVSLIGDFNGWNRESHPLERNERGVWEITLPPDALAHGQKVKVHV
CCCCEEHHHHCCHHHEEEEEECCCCCCCCCCCCCCCCCCEEEEECCHHHHCCCCEEEEEE
VGADGTGRDRIPAWITRTVQDPTTYDFAGEIWMPEHPYEWRNNGFDPSRVEVPFVYEAHV
EECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEEEEEECC
GMGGEEGRVHTYREFADEVLPRIARLGYNTVQLMAIQEHPYYGSFGYHVSSFFAPSSRFG
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHCCCCCCCC
EPEDLKYLIDQAHGLGIAVLLDVVHSHAVKNEAEGLNNFDGSGGMYFLPGERGRHPDWDS
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCHHH
CCFDYGRDEVIEFLLSNVRWWLEEFRFDGFRFDGVTSMLYFHRGHEPFGDLGAYFGSSVD
HHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCCCCHHHHHHHCCCCCC
LDAVAYLQLAATLIQRVKPGAIAIAEDMSGMPGLCRPVDEGGIGFSHRLAMGIPDYWIKL
HHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHEECCCHHHHHHH
LKEKKDEEWSMGDMWHTLTNRRYGEPHVAYCESHDQALVGDKTLAFRLMDAEMYWKMAVD
HHHCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCEEECCCEEEEEEECHHHHHHHHCC
QQSLIIDRGMALHKMIRLVTLATGGEGWLNFMGNEFGHPEWIDFPREGNGWSYEYCRRQW
CHHHHHHCCHHHHHHHHHHHEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
SLVDNPSLRFKFLNAFDQAMVRLAQEARLLNNPPPFPLNIDETNHVMAFHRGGLLFVFNW
CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCEEEEECCCEEEEEEC
SGDRAIMDYMLPVPQKGEWRVVLDTDNARFGGFGRQDVSMPHFTDGEGNLSLYLLPRTAL
CCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEECCCCCEEEEECCHHHH
VLKRVGSAVMARHPGRED
HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRRPPIPGLVMADGWLQPYSRQIRDRQRLFDLKMKRINQRAGSLEEYARGYRYYGFNRDA
CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEECCCCCC
ETGAWTYREWAPAARRVSLIGDFNGWNRESHPLERNERGVWEITLPPDALAHGQKVKVHV
CCCCEEHHHHCCHHHEEEEEECCCCCCCCCCCCCCCCCCEEEEECCHHHHCCCCEEEEEE
VGADGTGRDRIPAWITRTVQDPTTYDFAGEIWMPEHPYEWRNNGFDPSRVEVPFVYEAHV
EECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEEEEEECC
GMGGEEGRVHTYREFADEVLPRIARLGYNTVQLMAIQEHPYYGSFGYHVSSFFAPSSRFG
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHCCCCCCCC
EPEDLKYLIDQAHGLGIAVLLDVVHSHAVKNEAEGLNNFDGSGGMYFLPGERGRHPDWDS
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCHHH
CCFDYGRDEVIEFLLSNVRWWLEEFRFDGFRFDGVTSMLYFHRGHEPFGDLGAYFGSSVD
HHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCCCCHHHHHHHCCCCCC
LDAVAYLQLAATLIQRVKPGAIAIAEDMSGMPGLCRPVDEGGIGFSHRLAMGIPDYWIKL
HHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHEECCCHHHHHHH
LKEKKDEEWSMGDMWHTLTNRRYGEPHVAYCESHDQALVGDKTLAFRLMDAEMYWKMAVD
HHHCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCEEECCCEEEEEEECHHHHHHHHCC
QQSLIIDRGMALHKMIRLVTLATGGEGWLNFMGNEFGHPEWIDFPREGNGWSYEYCRRQW
CHHHHHHCCHHHHHHHHHHHEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
SLVDNPSLRFKFLNAFDQAMVRLAQEARLLNNPPPFPLNIDETNHVMAFHRGGLLFVFNW
CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCEEEEECCCEEEEEEC
SGDRAIMDYMLPVPQKGEWRVVLDTDNARFGGFGRQDVSMPHFTDGEGNLSLYLLPRTAL
CCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEECCCCCEEEEECCHHHH
VLKRVGSAVMARHPGRED
HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA