Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736237

Identifier: 187736237

GI number: 187736237

Start: 2131594

End: 2132610

Strand: Direct

Name: 187736237

Synonym: Amuc_1750

Alternate gene names: NA

Gene position: 2131594-2132610 (Clockwise)

Preceding gene: 187736234

Following gene: 187736238

Centisome position: 80.01

GC content: 56.93

Gene sequence:

>1017_bases
ATGAAGCTGCCATCATTCATTACCGCCGGAAGGACTGGAAAATTAGTAAGGGGAAAGCATTGGTGGGTGACGGAAGTCCG
GTGCTGCGGCCTGAAAGTGCTTTCTTCCTGCACGGATAGGAAAAAGCGTTTCATCCGTTTTTTCGGTATTCCATGCGGAC
GGTTCAAGGTGGGCCGGGAAGGTGAAGCCTCCCAATTGGGCAAACTGGTAAAAGCTACCGTTCGGGCCGAGGAGATGCCC
CAGGCGTCCGGAGTGCTGAGGATTGTGCAGCAGGCCATGACCTGTTTTTTGAATGAAGTGGCCGGAATTCTTGAGGAGGG
CGGTTATCCGTACTGGCTTGATTTCGGGACGCTGCTGGGCGCGGTGCGGCACCGGGGCTTTATCCCCTGGGATGACGACC
TGGATATTTCCATGCTGCGTGAAGATTATGAAAGGTTGAGGGCGAACGCCGCCGGGCTTTTCGGTTCGCGCGGTTTCTCC
GTCAGTATGGATCCGTTCATCCAGATAGGGTTGCCGGGCACGTTGTGCAATGTGGACATTTTCCCGTATGACACGGCCCC
TGCCGCGTGGTCTCCGGATGCTCCTGAAGAAAGGGAGTGGCTGCTGCGCGGTTACAAGGCATCCGGAATGCTTGATTATG
AGGCAGATTCCTCCTGCCGCTACCGGACGCGGTGTTCTTATGAGGAAAAGATGGCGATCCGGGACCGGGTGGTGATGGGA
GGACGGCGGCCGGCGGATGGAGGAAACATTTTCCTGGGATTTGAGATTCCTTTTGCCGGCCCGTGCCGCCATTCCTTCCG
CCATGAATGGCTGTTTCCGCTTTCCCGCGTTCGGTTTGAGGGGAGGGATTTCCCGGCCCCCAGGATTCCTGAAATGGTGT
TGTACGGCCAGTACGGGGACTGGGGAGTGCTGCCGGATTCTCCCCCTGTGCATTTTGATTTGAACCACATTTCCAAGGAG
GTTCTGGCCAGGATGATGTACATGCGTGATACGGGGCGCCTTCCCGGGCGCGATTAA

Upstream 100 bases:

>100_bases
TGACTTGTAAAAAGTGGGGGATAAGGTTCTGATTCTGCCGGATGTGCTTTCCTGGAAAAATGAATCATATCCTGCGTGTT
TTTGACCCAATTTATCTGCG

Downstream 100 bases:

>100_bases
AGGGCCGCGCCCTTTTCTTCCCCCGCAGGGAGAAGCCCTTCTTTCTTCCTTGACCCTGCTGATTGAGGAGGGGTATCATC
AGATAATGAGAAGACCCCCG

Product: LPS biosynthesis protein-like protein

Products: NA

Alternate protein names: Lipooligosaccharide Cholinephosphotransferase; LicD2 Protein; 2-C-Methyl-D-Erythritol 4-Phosphate Cytidylyltransferase; LPS Biosynthesis Protein; LPS Biosynthesis Protein-Like Protein; LicD-Family Phosphotransferase; Cholinephosphotransferase; LICD Protein Family

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MKLPSFITAGRTGKLVRGKHWWVTEVRCCGLKVLSSCTDRKKRFIRFFGIPCGRFKVGREGEASQLGKLVKATVRAEEMP
QASGVLRIVQQAMTCFLNEVAGILEEGGYPYWLDFGTLLGAVRHRGFIPWDDDLDISMLREDYERLRANAAGLFGSRGFS
VSMDPFIQIGLPGTLCNVDIFPYDTAPAAWSPDAPEEREWLLRGYKASGMLDYEADSSCRYRTRCSYEEKMAIRDRVVMG
GRRPADGGNIFLGFEIPFAGPCRHSFRHEWLFPLSRVRFEGRDFPAPRIPEMVLYGQYGDWGVLPDSPPVHFDLNHISKE
VLARMMYMRDTGRLPGRD

Sequences:

>Translated_338_residues
MKLPSFITAGRTGKLVRGKHWWVTEVRCCGLKVLSSCTDRKKRFIRFFGIPCGRFKVGREGEASQLGKLVKATVRAEEMP
QASGVLRIVQQAMTCFLNEVAGILEEGGYPYWLDFGTLLGAVRHRGFIPWDDDLDISMLREDYERLRANAAGLFGSRGFS
VSMDPFIQIGLPGTLCNVDIFPYDTAPAAWSPDAPEEREWLLRGYKASGMLDYEADSSCRYRTRCSYEEKMAIRDRVVMG
GRRPADGGNIFLGFEIPFAGPCRHSFRHEWLFPLSRVRFEGRDFPAPRIPEMVLYGQYGDWGVLPDSPPVHFDLNHISKE
VLARMMYMRDTGRLPGRD
>Mature_338_residues
MKLPSFITAGRTGKLVRGKHWWVTEVRCCGLKVLSSCTDRKKRFIRFFGIPCGRFKVGREGEASQLGKLVKATVRAEEMP
QASGVLRIVQQAMTCFLNEVAGILEEGGYPYWLDFGTLLGAVRHRGFIPWDDDLDISMLREDYERLRANAAGLFGSRGFS
VSMDPFIQIGLPGTLCNVDIFPYDTAPAAWSPDAPEEREWLLRGYKASGMLDYEADSSCRYRTRCSYEEKMAIRDRVVMG
GRRPADGGNIFLGFEIPFAGPCRHSFRHEWLFPLSRVRFEGRDFPAPRIPEMVLYGQYGDWGVLPDSPPVHFDLNHISKE
VLARMMYMRDTGRLPGRD

Specific function: Unknown

COG id: COG3475

COG function: function code M; LPS biosynthesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38383; Mature: 38383

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLPSFITAGRTGKLVRGKHWWVTEVRCCGLKVLSSCTDRKKRFIRFFGIPCGRFKVGRE
CCCCCCEECCCCCCEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCC
GEASQLGKLVKATVRAEEMPQASGVLRIVQQAMTCFLNEVAGILEEGGYPYWLDFGTLLG
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHH
AVRHRGFIPWDDDLDISMLREDYERLRANAAGLFGSRGFSVSMDPFIQIGLPGTLCNVDI
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEECCCCEEEEEEE
FPYDTAPAAWSPDAPEEREWLLRGYKASGMLDYEADSSCRYRTRCSYEEKMAIRDRVVMG
ECCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCHHCCCHHHHHHHHHHHHCC
GRRPADGGNIFLGFEIPFAGPCRHSFRHEWLFPLSRVRFEGRDFPAPRIPEMVLYGQYGD
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCHHHHHEECCCCCCCCCCCCEEEEECCCC
WGVLPDSPPVHFDLNHISKEVLARMMYMRDTGRLPGRD
CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKLPSFITAGRTGKLVRGKHWWVTEVRCCGLKVLSSCTDRKKRFIRFFGIPCGRFKVGRE
CCCCCCEECCCCCCEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCC
GEASQLGKLVKATVRAEEMPQASGVLRIVQQAMTCFLNEVAGILEEGGYPYWLDFGTLLG
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHH
AVRHRGFIPWDDDLDISMLREDYERLRANAAGLFGSRGFSVSMDPFIQIGLPGTLCNVDI
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEECCCCEEEEEEE
FPYDTAPAAWSPDAPEEREWLLRGYKASGMLDYEADSSCRYRTRCSYEEKMAIRDRVVMG
ECCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCHHCCCHHHHHHHHHHHHCC
GRRPADGGNIFLGFEIPFAGPCRHSFRHEWLFPLSRVRFEGRDFPAPRIPEMVLYGQYGD
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCHHHHHEECCCCCCCCCCCCEEEEECCCC
WGVLPDSPPVHFDLNHISKEVLARMMYMRDTGRLPGRD
CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA