Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736218

Identifier: 187736218

GI number: 187736218

Start: 2112520

End: 2114142

Strand: Reverse

Name: 187736218

Synonym: Amuc_1731

Alternate gene names: NA

Gene position: 2114142-2112520 (Counterclockwise)

Preceding gene: 187736223

Following gene: 187736217

Centisome position: 79.36

GC content: 59.33

Gene sequence:

>1623_bases
ATGAACATCCTCCCCCTCTCCCTTTTCTGCCTCTGCCTCTGCTGCGGGTTTTCCCGGGGCGGCCAGCCGCCGGAAGGCGC
TCCTGTCCGTTTCCGGATCAATATGGATCAGGCTGCGGGAAACAAGGCTCCGTCCACGGGCCCCGTTCCGAACCAGAGCA
CGCCGTTGAACGCGGCCAAACTGCTGCTCCGCGCCCTTCAGGAAAAAACGGACTGGAAACACGAGCCGTACAAGTCATTG
CCCGCCACTTCCCCCTTTGTAAGCCAACTCAGGCTGAAAAGCATCCTTTCCCGCATGGAGGCGGTCCAGGGGTATGTCAC
CGGAGCGGCCCCGGAACGTCCGCCCTTTGTGGATGAAGACTCCATCATTGCTGAAGGCGACCTGGCGATGGCCTACATCC
TGCTGCCGGACAAGGCCAACCCGTACGTTTATGCGGCCACCGCCGTGGCCCTGGTGAAGAAAGAAGGCCAATGGAAGGCC
TCCCTGACTCCCGGAAGCTTTGACAACACATTTCTTCCCTTTGACGACGGCATCCGTGAGAAAGCGAAAAAAATATCCTC
GGAGGCCAAGAAGAAAATTTTCGGCCTCGCCCACCAGTACTCCGTAGCCGCCGTTAAAGCCGCCCTGGAACATATCAAGC
GTTTCCGTCAGGAAAACGTCAGGGGAACAACGGACGACGAACTCAAGAACCTGCTCATCCGGGCCGTGAAGGGGGATGAC
CCGGCCCTCATCGCCGCCCTGCTCGTTTCCCCGTATTATACGGAATCCGCCATTACCCAGAGCGCACGCCTCATTCCCGT
GGTCAAGGCCATGCGCCTCCAGGACAGAAGGGAGGAAAACCGCTATATCCAGCCTACCCACCTCAGCTTCATGACCTTTC
CGAATACCATCCTGGTTCCCCTGAGCCCCCATCCGGACGACCAGATGGCCCCGAACAGCCGTGAAGAAGACCAGCAGGAG
GAAGCCAATAAAAACAACGCGAAGAAGAACGGCAAGGACATCCACAGCATCGGAGCCATGACCATCCTGCCGCCGCGCAT
GAGCATGCCGGACATAGACAAACCCGCTCTCATTTACCGCTATGCGCTGGAAAAAACCAAGGATCCCACAGACGGCCTTC
CCGTCTTCAAGATGAACCTGACGGACGCTTTCGCTTCCTGGAATCTGAAACCGGACGAATCCACCACCGCCCGCATCATG
GCGGATTTCCATCGGACGTATCCTCCGCTGTCCTTTCCCACACCGGAAGAGGCCGTAACCGCCGCCGGCCGCGCCCTGGC
GAACCGGGACAGCCTGGCCATGATGCGCATGCTGGCCCCGTCCAACTTCGCCTCCGTGAAGGAATTTGAAGACGCGCTCT
CCCAATTGAAAACAGTCATGGGAAGGATTCCCACCCCGCACACCGGGGTAAGGGAAAAAGACGTTCCCGAAGTCAAAGCG
GCGTATATTCCCGCCGCCAGAGACGGCTGCGCCGGAATCAAGGCCACCATCGGCGTGCGTACAGCAGTTGGAAATGAATT
CTCCGTCAACAACCTGCACTTCATCCAAACGGACGGCGGCTGGATGCTCGCCGGGGCCGATGCGGAACAGCCGCTGGAAC
TGGAGGCCCCCAAGGCTCCCTGA

Upstream 100 bases:

>100_bases
GGAGTCCAGGGTTGTCCGCCCTGCGGCAACGGCCGCGTCAACATTCCCAACGAATGATTTACACCCGCAGCCGTTTATGC
CATAGTGGCGGCCAGCGGTC

Downstream 100 bases:

>100_bases
TCATATCCGTCCCGGAACGCCATGCCTTCCTAAAAACCTTTTCATTACCACACCATGATGAATCTACCGATACGGCCTCG
CCGCAACAGAAAATCCGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MNILPLSLFCLCLCCGFSRGGQPPEGAPVRFRINMDQAAGNKAPSTGPVPNQSTPLNAAKLLLRALQEKTDWKHEPYKSL
PATSPFVSQLRLKSILSRMEAVQGYVTGAAPERPPFVDEDSIIAEGDLAMAYILLPDKANPYVYAATAVALVKKEGQWKA
SLTPGSFDNTFLPFDDGIREKAKKISSEAKKKIFGLAHQYSVAAVKAALEHIKRFRQENVRGTTDDELKNLLIRAVKGDD
PALIAALLVSPYYTESAITQSARLIPVVKAMRLQDRREENRYIQPTHLSFMTFPNTILVPLSPHPDDQMAPNSREEDQQE
EANKNNAKKNGKDIHSIGAMTILPPRMSMPDIDKPALIYRYALEKTKDPTDGLPVFKMNLTDAFASWNLKPDESTTARIM
ADFHRTYPPLSFPTPEEAVTAAGRALANRDSLAMMRMLAPSNFASVKEFEDALSQLKTVMGRIPTPHTGVREKDVPEVKA
AYIPAARDGCAGIKATIGVRTAVGNEFSVNNLHFIQTDGGWMLAGADAEQPLELEAPKAP

Sequences:

>Translated_540_residues
MNILPLSLFCLCLCCGFSRGGQPPEGAPVRFRINMDQAAGNKAPSTGPVPNQSTPLNAAKLLLRALQEKTDWKHEPYKSL
PATSPFVSQLRLKSILSRMEAVQGYVTGAAPERPPFVDEDSIIAEGDLAMAYILLPDKANPYVYAATAVALVKKEGQWKA
SLTPGSFDNTFLPFDDGIREKAKKISSEAKKKIFGLAHQYSVAAVKAALEHIKRFRQENVRGTTDDELKNLLIRAVKGDD
PALIAALLVSPYYTESAITQSARLIPVVKAMRLQDRREENRYIQPTHLSFMTFPNTILVPLSPHPDDQMAPNSREEDQQE
EANKNNAKKNGKDIHSIGAMTILPPRMSMPDIDKPALIYRYALEKTKDPTDGLPVFKMNLTDAFASWNLKPDESTTARIM
ADFHRTYPPLSFPTPEEAVTAAGRALANRDSLAMMRMLAPSNFASVKEFEDALSQLKTVMGRIPTPHTGVREKDVPEVKA
AYIPAARDGCAGIKATIGVRTAVGNEFSVNNLHFIQTDGGWMLAGADAEQPLELEAPKAP
>Mature_540_residues
MNILPLSLFCLCLCCGFSRGGQPPEGAPVRFRINMDQAAGNKAPSTGPVPNQSTPLNAAKLLLRALQEKTDWKHEPYKSL
PATSPFVSQLRLKSILSRMEAVQGYVTGAAPERPPFVDEDSIIAEGDLAMAYILLPDKANPYVYAATAVALVKKEGQWKA
SLTPGSFDNTFLPFDDGIREKAKKISSEAKKKIFGLAHQYSVAAVKAALEHIKRFRQENVRGTTDDELKNLLIRAVKGDD
PALIAALLVSPYYTESAITQSARLIPVVKAMRLQDRREENRYIQPTHLSFMTFPNTILVPLSPHPDDQMAPNSREEDQQE
EANKNNAKKNGKDIHSIGAMTILPPRMSMPDIDKPALIYRYALEKTKDPTDGLPVFKMNLTDAFASWNLKPDESTTARIM
ADFHRTYPPLSFPTPEEAVTAAGRALANRDSLAMMRMLAPSNFASVKEFEDALSQLKTVMGRIPTPHTGVREKDVPEVKA
AYIPAARDGCAGIKATIGVRTAVGNEFSVNNLHFIQTDGGWMLAGADAEQPLELEAPKAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59277; Mature: 59277

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILPLSLFCLCLCCGFSRGGQPPEGAPVRFRINMDQAAGNKAPSTGPVPNQSTPLNAAK
CCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECHHHCCCCCCCCCCCCCCCCCCHHHH
LLLRALQEKTDWKHEPYKSLPATSPFVSQLRLKSILSRMEAVQGYVTGAAPERPPFVDED
HHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
SIIAEGDLAMAYILLPDKANPYVYAATAVALVKKEGQWKASLTPGSFDNTFLPFDDGIRE
CEEECCCEEEEEEEECCCCCCEEEHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHH
KAKKISSEAKKKIFGLAHQYSVAAVKAALEHIKRFRQENVRGTTDDELKNLLIRAVKGDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
PALIAALLVSPYYTESAITQSARLIPVVKAMRLQDRREENRYIQPTHLSFMTFPNTILVP
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEE
LSPHPDDQMAPNSREEDQQEEANKNNAKKNGKDIHSIGAMTILPPRMSMPDIDKPALIYR
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCEEEECCCCCCCCCCCCHHHHH
YALEKTKDPTDGLPVFKMNLTDAFASWNLKPDESTTARIMADFHRTYPPLSFPTPEEAVT
HHHHHCCCCCCCCCEEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHH
AAGRALANRDSLAMMRMLAPSNFASVKEFEDALSQLKTVMGRIPTPHTGVREKDVPEVKA
HHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
AYIPAARDGCAGIKATIGVRTAVGNEFSVNNLHFIQTDGGWMLAGADAEQPLELEAPKAP
HCCCCCCCCCCCCEEEEEEEEECCCCEECCCEEEEEECCCEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNILPLSLFCLCLCCGFSRGGQPPEGAPVRFRINMDQAAGNKAPSTGPVPNQSTPLNAAK
CCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECHHHCCCCCCCCCCCCCCCCCCHHHH
LLLRALQEKTDWKHEPYKSLPATSPFVSQLRLKSILSRMEAVQGYVTGAAPERPPFVDED
HHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
SIIAEGDLAMAYILLPDKANPYVYAATAVALVKKEGQWKASLTPGSFDNTFLPFDDGIRE
CEEECCCEEEEEEEECCCCCCEEEHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHH
KAKKISSEAKKKIFGLAHQYSVAAVKAALEHIKRFRQENVRGTTDDELKNLLIRAVKGDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
PALIAALLVSPYYTESAITQSARLIPVVKAMRLQDRREENRYIQPTHLSFMTFPNTILVP
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEE
LSPHPDDQMAPNSREEDQQEEANKNNAKKNGKDIHSIGAMTILPPRMSMPDIDKPALIYR
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCEEEECCCCCCCCCCCCHHHHH
YALEKTKDPTDGLPVFKMNLTDAFASWNLKPDESTTARIMADFHRTYPPLSFPTPEEAVT
HHHHHCCCCCCCCCEEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHH
AAGRALANRDSLAMMRMLAPSNFASVKEFEDALSQLKTVMGRIPTPHTGVREKDVPEVKA
HHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
AYIPAARDGCAGIKATIGVRTAVGNEFSVNNLHFIQTDGGWMLAGADAEQPLELEAPKAP
HCCCCCCCCCCCCEEEEEEEEECCCCEECCCEEEEEECCCEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA