Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736194
Identifier: 187736194
GI number: 187736194
Start: 2073439
End: 2074362
Strand: Reverse
Name: 187736194
Synonym: Amuc_1707
Alternate gene names: NA
Gene position: 2074362-2073439 (Counterclockwise)
Preceding gene: 187736199
Following gene: 187736191
Centisome position: 77.86
GC content: 47.08
Gene sequence:
>924_bases ATGACAACGGGCAATACAGCCCTTGCCGCTACACAATATGATTCCGGCATTCCCAGAAATTCCGTACCAGATAGAACTTC CGATAATTCCGCCAAAAGAGTGATCATGATTTCCCTGGACGGTATTTGTGTGGAAGGTTTTCAAAAGGCGCATGCGCCCT CTTTAAAAGGAATGATGTCACAGGGAGCTTTTTCTCTGGATACGCGGGTTGTGATGCCCTCCGTCACGTTACCTAACTGG ACCAGTCACTTAACCGGCAGCGGCCCGGAACAGCACGGAGTCTTCAATAATAACTGGACGCCGGCAAATTCCTCCTACCC CGCCGTACGGAGAGACGAAGACGGATATTATCCCTCCGTATTCCAGGCCCTGAAAAAATGCCAGCCTTCCTGCAAAACAG CTTTTTACTATAATTGGAAACCTCTTGCCTATCCGTTCAACAAAAAATACCTGGATGAAATCAAGTACCTGGCAAACGAC GCCTATGCTTCCAATTACCATCAGGCTTTCCAATTCGTCAAGAAACACCGCTACAACCCGACTGTGGTTTTTCTCTATTC CGTTCATACAGATCATGCGGGGCACAAATACGGCTGGATGTCCAGAGAATACCTTCAATCTATTGAAGAGGCGGATCAGC AAATTGGAATCTTTTTTCAGAAATTGAGGCAGGAAGACTTATTCAACGATACGCATTTTCTATTTCTGACGGATCATGGG GGAATCGGAAAGGGCCACGGGGGGACGAGCGCAGCGGAAATGATAGTTCCATGGGGAATTTCAGGTCCGGGCATTAAGAG AAATTTCCTGATTTCCGAACCAAACAATACCACCAATACCGCTCCCATGCTTCTTCATTTATTCGGAGGAAAGCCACTAC CGGAATGGACGGGGAAAGTCATAGAAAGCGTATTTCCATCATAA
Upstream 100 bases:
>100_bases AAATACTTCAAGCCAACAGTATGTACTTTATATGGAAAACTCTTATCATCAAACAACACGCCGGAATTTCCTGAATAAAT TAGGCCTGGCGGCAGCAGGA
Downstream 100 bases:
>100_bases CTCCCCGTAGCTTGCTTTTCCTGATGCAATTTACCGCCTCTTCACGGCAGGAAACAAAACATGGCTGCCGGATGGCATTC CCTGCCGGAGTTGAACCGAG
Product: type I phosphodiesterase/nucleotide pyrophosphatase
Products: NA
Alternate protein names: Phosphodiesterase/Nucleotide Pyrophosphatase-Like Protein; Nucleotide Pyrophosphatase; Nucleotide Pyrophosphatase-Like Protein; PA14 Domain Protein; Coagulation Factor 5/8 Type Domain-Containing Protein; Sulfatase
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MTTGNTALAATQYDSGIPRNSVPDRTSDNSAKRVIMISLDGICVEGFQKAHAPSLKGMMSQGAFSLDTRVVMPSVTLPNW TSHLTGSGPEQHGVFNNNWTPANSSYPAVRRDEDGYYPSVFQALKKCQPSCKTAFYYNWKPLAYPFNKKYLDEIKYLAND AYASNYHQAFQFVKKHRYNPTVVFLYSVHTDHAGHKYGWMSREYLQSIEEADQQIGIFFQKLRQEDLFNDTHFLFLTDHG GIGKGHGGTSAAEMIVPWGISGPGIKRNFLISEPNNTTNTAPMLLHLFGGKPLPEWTGKVIESVFPS
Sequences:
>Translated_307_residues MTTGNTALAATQYDSGIPRNSVPDRTSDNSAKRVIMISLDGICVEGFQKAHAPSLKGMMSQGAFSLDTRVVMPSVTLPNW TSHLTGSGPEQHGVFNNNWTPANSSYPAVRRDEDGYYPSVFQALKKCQPSCKTAFYYNWKPLAYPFNKKYLDEIKYLAND AYASNYHQAFQFVKKHRYNPTVVFLYSVHTDHAGHKYGWMSREYLQSIEEADQQIGIFFQKLRQEDLFNDTHFLFLTDHG GIGKGHGGTSAAEMIVPWGISGPGIKRNFLISEPNNTTNTAPMLLHLFGGKPLPEWTGKVIESVFPS >Mature_306_residues TTGNTALAATQYDSGIPRNSVPDRTSDNSAKRVIMISLDGICVEGFQKAHAPSLKGMMSQGAFSLDTRVVMPSVTLPNWT SHLTGSGPEQHGVFNNNWTPANSSYPAVRRDEDGYYPSVFQALKKCQPSCKTAFYYNWKPLAYPFNKKYLDEIKYLANDA YASNYHQAFQFVKKHRYNPTVVFLYSVHTDHAGHKYGWMSREYLQSIEEADQQIGIFFQKLRQEDLFNDTHFLFLTDHGG IGKGHGGTSAAEMIVPWGISGPGIKRNFLISEPNNTTNTAPMLLHLFGGKPLPEWTGKVIESVFPS
Specific function: Unknown
COG id: COG1524
COG function: function code R; Uncharacterized proteins of the AP superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34359; Mature: 34228
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTGNTALAATQYDSGIPRNSVPDRTSDNSAKRVIMISLDGICVEGFQKAHAPSLKGMMS CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEHHHHHHHCCCHHHHHHH QGAFSLDTRVVMPSVTLPNWTSHLTGSGPEQHGVFNNNWTPANSSYPAVRRDEDGYYPSV CCCEECCCEEEECCCCCCCCHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHH FQALKKCQPSCKTAFYYNWKPLAYPFNKKYLDEIKYLANDAYASNYHQAFQFVKKHRYNP HHHHHHCCCCCCEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TVVFLYSVHTDHAGHKYGWMSREYLQSIEEADQQIGIFFQKLRQEDLFNDTHFLFLTDHG EEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC GIGKGHGGTSAAEMIVPWGISGPGIKRNFLISEPNNTTNTAPMLLHLFGGKPLPEWTGKV CCCCCCCCCCHHHEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHH IESVFPS HHHHCCC >Mature Secondary Structure TTGNTALAATQYDSGIPRNSVPDRTSDNSAKRVIMISLDGICVEGFQKAHAPSLKGMMS CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEHHHHHHHCCCHHHHHHH QGAFSLDTRVVMPSVTLPNWTSHLTGSGPEQHGVFNNNWTPANSSYPAVRRDEDGYYPSV CCCEECCCEEEECCCCCCCCHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHH FQALKKCQPSCKTAFYYNWKPLAYPFNKKYLDEIKYLANDAYASNYHQAFQFVKKHRYNP HHHHHHCCCCCCEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TVVFLYSVHTDHAGHKYGWMSREYLQSIEEADQQIGIFFQKLRQEDLFNDTHFLFLTDHG EEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC GIGKGHGGTSAAEMIVPWGISGPGIKRNFLISEPNNTTNTAPMLLHLFGGKPLPEWTGKV CCCCCCCCCCHHHEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHH IESVFPS HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA