Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736129

Identifier: 187736129

GI number: 187736129

Start: 1983349

End: 1984077

Strand: Direct

Name: 187736129

Synonym: Amuc_1640

Alternate gene names: NA

Gene position: 1983349-1984077 (Clockwise)

Preceding gene: 187736128

Following gene: 187736130

Centisome position: 74.45

GC content: 55.83

Gene sequence:

>729_bases
ATGCTGCTGCTCAATCCTATTGTTCGGAAAACATCTGAAAAGCGTTCCCGCTGGTGGACCAGGCTGGCCGGATTTGGCCT
GTGGTCCGTACTCCAGCCCATTTGCATGAGCCTGAATATCCGTTCCATCAAGGAGGAGCATGATGATGTTTATACGGCGC
CTTTTCTGGTAGCCCTTTGGCACAACCGCACGATGGTGCCGGGTTATGCGTGGTCCCTGGCCCAGAAGCCGCTCAAGATG
AGTGTGCTTACCAGCGCCAGCAAGGACGGCGCCCTGGTGGAGGCCGTATGCAGGCATTTTGGCCTGGGTGCCGTCCGGGG
ATCTTCCGGACGGCGGGGGGCTCTGGCCTACATGGAAATGATGCGAAAGGTCCAGGAGGGGGACGTCTGCTTCTGTTTTA
CTCCGGATGGTCCGCGAGGCCCTATTTACGAAGTGCACCACGGTATTGTCAAACTGGCCTCCCAGTCAGGGCTGCCCATC
GTTCCCGTATGCATCGAATATGAAAGCTGCTGGCGTTTGAACAAGACCTGGGACCGCTATGCCATTCCCAAACCGTGTTC
CAACGTAAATATTCTATGGAAAAAGCGCCTGTTCATTCCTCCGGACGCGACGGATGAACAGGTGGCGGATTATGCCCGTC
TTCTGGCCGGGCTGCTTGGCGAGGGGCTTCCGGACTTCCCGCCTCTTAACCAATCATTATTATGCAAATCATCGATGGAA
AACAAGTAG

Upstream 100 bases:

>100_bases
GCATACCGCTCCTTCCCGTGGAATAGCTCTTCCAGCTCCGTCAAATTCCTCTCCTTCCCGTATTACGGTAGACGGATTCA
TGTGATATTGCCAGGACTCC

Downstream 100 bases:

>100_bases
CTTCCCAGGTGCTGGAAGAGGTTGAAAGGGATATTGCCCGGCTCAGGGAACAGGGAATAACGCCCGGCTTGGCCGTGGTT
CTGGTAGGGGAAGATCCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MLLLNPIVRKTSEKRSRWWTRLAGFGLWSVLQPICMSLNIRSIKEEHDDVYTAPFLVALWHNRTMVPGYAWSLAQKPLKM
SVLTSASKDGALVEAVCRHFGLGAVRGSSGRRGALAYMEMMRKVQEGDVCFCFTPDGPRGPIYEVHHGIVKLASQSGLPI
VPVCIEYESCWRLNKTWDRYAIPKPCSNVNILWKKRLFIPPDATDEQVADYARLLAGLLGEGLPDFPPLNQSLLCKSSME
NK

Sequences:

>Translated_242_residues
MLLLNPIVRKTSEKRSRWWTRLAGFGLWSVLQPICMSLNIRSIKEEHDDVYTAPFLVALWHNRTMVPGYAWSLAQKPLKM
SVLTSASKDGALVEAVCRHFGLGAVRGSSGRRGALAYMEMMRKVQEGDVCFCFTPDGPRGPIYEVHHGIVKLASQSGLPI
VPVCIEYESCWRLNKTWDRYAIPKPCSNVNILWKKRLFIPPDATDEQVADYARLLAGLLGEGLPDFPPLNQSLLCKSSME
NK
>Mature_242_residues
MLLLNPIVRKTSEKRSRWWTRLAGFGLWSVLQPICMSLNIRSIKEEHDDVYTAPFLVALWHNRTMVPGYAWSLAQKPLKM
SVLTSASKDGALVEAVCRHFGLGAVRGSSGRRGALAYMEMMRKVQEGDVCFCFTPDGPRGPIYEVHHGIVKLASQSGLPI
VPVCIEYESCWRLNKTWDRYAIPKPCSNVNILWKKRLFIPPDATDEQVADYARLLAGLLGEGLPDFPPLNQSLLCKSSME
NK

Specific function: Unknown

COG id: COG2121

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To H.pylori HP0270 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007172
- ProDom:   PD032436 [H]

Pfam domain/function: PF04028 DUF374 [H]

EC number: NA

Molecular weight: Translated: 27220; Mature: 27220

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLLNPIVRKTSEKRSRWWTRLAGFGLWSVLQPICMSLNIRSIKEEHDDVYTAPFLVALW
CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHH
HNRTMVPGYAWSLAQKPLKMSVLTSASKDGALVEAVCRHFGLGAVRGSSGRRGALAYMEM
CCCCCCCCHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCEECCCCCCHHHHHHHH
MRKVQEGDVCFCFTPDGPRGPIYEVHHGIVKLASQSGLPIVPVCIEYESCWRLNKTWDRY
HHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECHHHHHCCCCCHHHC
AIPKPCSNVNILWKKRLFIPPDATDEQVADYARLLAGLLGEGLPDFPPLNQSLLCKSSME
CCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCC
NK
CC
>Mature Secondary Structure
MLLLNPIVRKTSEKRSRWWTRLAGFGLWSVLQPICMSLNIRSIKEEHDDVYTAPFLVALW
CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHH
HNRTMVPGYAWSLAQKPLKMSVLTSASKDGALVEAVCRHFGLGAVRGSSGRRGALAYMEM
CCCCCCCCHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCEECCCCCCHHHHHHHH
MRKVQEGDVCFCFTPDGPRGPIYEVHHGIVKLASQSGLPIVPVCIEYESCWRLNKTWDRY
HHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECHHHHHCCCCCHHHC
AIPKPCSNVNILWKKRLFIPPDATDEQVADYARLLAGLLGEGLPDFPPLNQSLLCKSSME
CCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCC
NK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]