Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736117
Identifier: 187736117
GI number: 187736117
Start: 1962245
End: 1962706
Strand: Direct
Name: 187736117
Synonym: Amuc_1628
Alternate gene names: NA
Gene position: 1962245-1962706 (Clockwise)
Preceding gene: 187736116
Following gene: 187736118
Centisome position: 73.66
GC content: 47.84
Gene sequence:
>462_bases ATGGCGCGAGTCATCTATGCGGAAGCCGATACGAAGGGTGCCGAGATAAGGACGAGTGCATTGGTGATGTTGAATCGTCC CGGCAGCACGAAAGGGAATGCTTATCGAAATCCCTTGTTGAGTATATTGACGGAATTTGGCGAAATCAAAGACGGTAAGA ATCCTGATTGGGCCTCCGTAATAAATCAGCAATATGCCAAGGTTGAAGTGGATGAGTACAGGGATATTGACAGGCTGAGC TGTGAAAAACTGGAAGAAGCCAGAAAGGCGCTCCTTGAGGTTCTGAGCGGTGGCGTGACTGTTCCTTATGATGAATTTAG AACGGCAGTCACTACTCCCACGCCTCATGTCACTATTGGCGGAACTGACTTTTTGACTGAAAAGCAGTATCGGAACTGTA TTGTCAAACCAGACGGATGCGATAGTTTGTCTGTCTGGCCCGGTGGACCTTTGGATAGATAA
Upstream 100 bases:
>100_bases ATGTAGAAGATCGTACTGACACTTGGAAAGGATACATTAGAGTAGAAAAAGCAGAACGGCATTATTTCCTCATCGACGGA GACGATGTTATGACTCTCCA
Downstream 100 bases:
>100_bases ATCATTCTGAAGCATCATCAGGCGGATCAGGTGATTGAGACTTGAGCCGTCTTTTTGACGAAGTAATATCTGGAGGATGA ATGCCTCTCTTAAAACGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MARVIYAEADTKGAEIRTSALVMLNRPGSTKGNAYRNPLLSILTEFGEIKDGKNPDWASVINQQYAKVEVDEYRDIDRLS CEKLEEARKALLEVLSGGVTVPYDEFRTAVTTPTPHVTIGGTDFLTEKQYRNCIVKPDGCDSLSVWPGGPLDR
Sequences:
>Translated_153_residues MARVIYAEADTKGAEIRTSALVMLNRPGSTKGNAYRNPLLSILTEFGEIKDGKNPDWASVINQQYAKVEVDEYRDIDRLS CEKLEEARKALLEVLSGGVTVPYDEFRTAVTTPTPHVTIGGTDFLTEKQYRNCIVKPDGCDSLSVWPGGPLDR >Mature_152_residues ARVIYAEADTKGAEIRTSALVMLNRPGSTKGNAYRNPLLSILTEFGEIKDGKNPDWASVINQQYAKVEVDEYRDIDRLSC EKLEEARKALLEVLSGGVTVPYDEFRTAVTTPTPHVTIGGTDFLTEKQYRNCIVKPDGCDSLSVWPGGPLDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16936; Mature: 16805
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARVIYAEADTKGAEIRTSALVMLNRPGSTKGNAYRNPLLSILTEFGEIKDGKNPDWASV CCEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHH INQQYAKVEVDEYRDIDRLSCEKLEEARKALLEVLSGGVTVPYDEFRTAVTTPTPHVTIG HHHHHHEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEECCCCCEEEEC GTDFLTEKQYRNCIVKPDGCDSLSVWPGGPLDR CCHHHHHHHHCCEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ARVIYAEADTKGAEIRTSALVMLNRPGSTKGNAYRNPLLSILTEFGEIKDGKNPDWASV CEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHH INQQYAKVEVDEYRDIDRLSCEKLEEARKALLEVLSGGVTVPYDEFRTAVTTPTPHVTIG HHHHHHEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEECCCCCEEEEC GTDFLTEKQYRNCIVKPDGCDSLSVWPGGPLDR CCHHHHHHHHCCEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA