Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736118
Identifier: 187736118
GI number: 187736118
Start: 1962783
End: 1963298
Strand: Direct
Name: 187736118
Synonym: Amuc_1629
Alternate gene names: NA
Gene position: 1962783-1963298 (Clockwise)
Preceding gene: 187736117
Following gene: 187736121
Centisome position: 73.68
GC content: 47.29
Gene sequence:
>516_bases ATGAATGCCTCTCTTAAAACGCTTCTTTTCTCTTGCCGCACGGTTCCCCTTGTTATGGCTTTTGACGTGCCTTCTCCCCT TGTCGATCATCCTCCGGTGGATGTTGCCGCCTTGCGTTTTCACAAGCAGGAGATGACTTTTCTGGAAAACTGTTTCCGGG AGAATCCGGATAACAAAGTAATTTGGCAGGCGGACCATGAAGCCGCATTAGTGTGGAGAACGCCGAGGGGAGCCAATTTT AACAGTTATGAATTTAAGGCTTTTCTGCGCCAGCAGGACGGTTCATTCATGGAAATGGGGAGGTATTCCGTCATGTCTAG CTATGGATATTGGGATGAAAAAAATATCCAATTCTCCGATAAAGGATTTCAGGTTGTTTTAATTGCGGATGGAGGAGCAA CGCATGCAAGTCATCAGTTCTATTATTCCCAACCTGCCGCTACCTTTGTTTTCCGGTTGGGCCGGGAAGAGGGCAAATGT TCCAACGAGGAAGTGTGGATGGACAATGGCAGTTGA
Upstream 100 bases:
>100_bases CCCGGTGGACCTTTGGATAGATAAATCATTCTGAAGCATCATCAGGCGGATCAGGTGATTGAGACTTGAGCCGTCTTTTT GACGAAGTAATATCTGGAGG
Downstream 100 bases:
>100_bases TTTCCAAACCGGTTTGTCTGCAATATAGGAGGGGAAAAGTGCAGTTTGGATGAACCCCGGCCATTCCTTGACGAAGAGGT TTTTTTGTTGCGGGCGTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MNASLKTLLFSCRTVPLVMAFDVPSPLVDHPPVDVAALRFHKQEMTFLENCFRENPDNKVIWQADHEAALVWRTPRGANF NSYEFKAFLRQQDGSFMEMGRYSVMSSYGYWDEKNIQFSDKGFQVVLIADGGATHASHQFYYSQPAATFVFRLGREEGKC SNEEVWMDNGS
Sequences:
>Translated_171_residues MNASLKTLLFSCRTVPLVMAFDVPSPLVDHPPVDVAALRFHKQEMTFLENCFRENPDNKVIWQADHEAALVWRTPRGANF NSYEFKAFLRQQDGSFMEMGRYSVMSSYGYWDEKNIQFSDKGFQVVLIADGGATHASHQFYYSQPAATFVFRLGREEGKC SNEEVWMDNGS >Mature_171_residues MNASLKTLLFSCRTVPLVMAFDVPSPLVDHPPVDVAALRFHKQEMTFLENCFRENPDNKVIWQADHEAALVWRTPRGANF NSYEFKAFLRQQDGSFMEMGRYSVMSSYGYWDEKNIQFSDKGFQVVLIADGGATHASHQFYYSQPAATFVFRLGREEGKC SNEEVWMDNGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19596; Mature: 19596
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNASLKTLLFSCRTVPLVMAFDVPSPLVDHPPVDVAALRFHKQEMTFLENCFRENPDNKV CCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCE IWQADHEAALVWRTPRGANFNSYEFKAFLRQQDGSFMEMGRYSVMSSYGYWDEKNIQFSD EEEECCCEEEEEECCCCCCCCCHHHHEEEHHCCCCHHHHHHHHHHHHCCCCCCCCEEECC KGFQVVLIADGGATHASHQFYYSQPAATFVFRLGREEGKCSNEEVWMDNGS CCEEEEEEECCCCCCCCCEEEECCCHHHHHHHHCCCCCCCCCCEEEEECCC >Mature Secondary Structure MNASLKTLLFSCRTVPLVMAFDVPSPLVDHPPVDVAALRFHKQEMTFLENCFRENPDNKV CCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCE IWQADHEAALVWRTPRGANFNSYEFKAFLRQQDGSFMEMGRYSVMSSYGYWDEKNIQFSD EEEECCCEEEEEECCCCCCCCCHHHHEEEHHCCCCHHHHHHHHHHHHCCCCCCCCEEECC KGFQVVLIADGGATHASHQFYYSQPAATFVFRLGREEGKCSNEEVWMDNGS CCEEEEEEECCCCCCCCCEEEECCCHHHHHHHHCCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA