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The map label for this gene is sod [H]

Identifier: 187736081

GI number: 187736081

Start: 1915359

End: 1916003

Strand: Reverse

Name: sod [H]

Synonym: Amuc_1592

Alternate gene names: 187736081

Gene position: 1916003-1915359 (Counterclockwise)

Preceding gene: 187736082

Following gene: 187736080

Centisome position: 71.92

GC content: 55.19

Gene sequence:

>645_bases
ATGACTAAACAGCAAGCCCCCTCCACGATCGGCTATGCCGACGGCAAATATGTACTGCCACCCCTTCCGTACGCCTACGA
CGCGCTTGAACCCATGCTGGATGAAAAAACCGTGCGCATCCACCACGACAAGCATCATGCGGCCTATGTCGCCGGAGCCA
ATGCCGCGGCTGAAAAGCTCCGTGAAATTGCGGACGGGAAACTGGACGCTTCCGCCACCACCAACTGGGTGCGTAACTTG
TCCTTCAATGCTTCCGGCCATGTTCTCCATACCATTTACTGGACCAACATGACGCCTGATCCCAAAAAAGAGCCGCAAGG
TCCTCTGGTAGATGCCATCAAGGAAAAATTCGGTTCTCTGGAAGCTATGATGAAGGAATTCAAGGCGGCTTCCCAGGGCG
TGGAAGGTTCCGGCTGGGGCATTCTGGGCGTGGACCCCATCAGCAAGACGCTGGTAATCTGCGGGGCGGAAAAACATCAG
AATCTGGAAATTCCCGGTCTCGTCCCCATTCTCGTCTGTGACGTTTGGGAACACGCCTATTATCTGAAGCACCAGAACCT
CCGGGCGGACTATATTGAAGACTTCTGCCGCCTGATCAACTGGGACGATGTGGAACGCCGCTACCAGGAGGCTATGGCTT
CCTGA

Upstream 100 bases:

>100_bases
CATGAACAGAAGGCGTTTTATTGCTCTTTCCTCATTGGCGGCGCTGGGAACAATCAGCCAGGCCCGGGCAACAGGGCCAT
TCATACAACCACAGCACAAG

Downstream 100 bases:

>100_bases
CCGTTTTTGCAGAAGTTGATTTTTCCTATCCCCAAACGGCACGGGCTTTCTGTAGTCCGCGCCGTTTTTTAACGCATTTT
CATCTCGCTCTTGCATCCGG

Product: Superoxide dismutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MTKQQAPSTIGYADGKYVLPPLPYAYDALEPMLDEKTVRIHHDKHHAAYVAGANAAAEKLREIADGKLDASATTNWVRNL
SFNASGHVLHTIYWTNMTPDPKKEPQGPLVDAIKEKFGSLEAMMKEFKAASQGVEGSGWGILGVDPISKTLVICGAEKHQ
NLEIPGLVPILVCDVWEHAYYLKHQNLRADYIEDFCRLINWDDVERRYQEAMAS

Sequences:

>Translated_214_residues
MTKQQAPSTIGYADGKYVLPPLPYAYDALEPMLDEKTVRIHHDKHHAAYVAGANAAAEKLREIADGKLDASATTNWVRNL
SFNASGHVLHTIYWTNMTPDPKKEPQGPLVDAIKEKFGSLEAMMKEFKAASQGVEGSGWGILGVDPISKTLVICGAEKHQ
NLEIPGLVPILVCDVWEHAYYLKHQNLRADYIEDFCRLINWDDVERRYQEAMAS
>Mature_213_residues
TKQQAPSTIGYADGKYVLPPLPYAYDALEPMLDEKTVRIHHDKHHAAYVAGANAAAEKLREIADGKLDASATTNWVRNLS
FNASGHVLHTIYWTNMTPDPKKEPQGPLVDAIKEKFGSLEAMMKEFKAASQGVEGSGWGILGVDPISKTLVICGAEKHQN
LEIPGLVPILVCDVWEHAYYLKHQNLRADYIEDFCRLINWDDVERRYQEAMAS

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems [H]

COG id: COG0605

COG function: function code P; Superoxide dismutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron/manganese superoxide dismutase family [H]

Homologues:

Organism=Homo sapiens, GI67782307, Length=210, Percent_Identity=43.3333333333333, Blast_Score=178, Evalue=3e-45,
Organism=Homo sapiens, GI67782305, Length=210, Percent_Identity=43.3333333333333, Blast_Score=178, Evalue=3e-45,
Organism=Homo sapiens, GI67782309, Length=210, Percent_Identity=35.2380952380952, Blast_Score=127, Evalue=8e-30,
Organism=Escherichia coli, GI1790342, Length=206, Percent_Identity=42.7184466019417, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI1787946, Length=196, Percent_Identity=32.6530612244898, Blast_Score=111, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI17506561, Length=208, Percent_Identity=40.3846153846154, Blast_Score=161, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17569479, Length=197, Percent_Identity=40.1015228426396, Blast_Score=153, Evalue=6e-38,
Organism=Saccharomyces cerevisiae, GI6321796, Length=203, Percent_Identity=33.0049261083744, Blast_Score=130, Evalue=2e-31,
Organism=Drosophila melanogaster, GI17136812, Length=198, Percent_Identity=42.9292929292929, Blast_Score=167, Evalue=6e-42,

Paralogues:

None

Copy number: 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001189
- InterPro:   IPR019833
- InterPro:   IPR019832
- InterPro:   IPR019831 [H]

Pfam domain/function: PF02777 Sod_Fe_C; PF00081 Sod_Fe_N [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 23921; Mature: 23790

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS00088 SOD_MN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKQQAPSTIGYADGKYVLPPLPYAYDALEPMLDEKTVRIHHDKHHAAYVAGANAAAEKL
CCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCCEEEEECCCCCEEEEECCHHHHHHH
REIADGKLDASATTNWVRNLSFNASGHVLHTIYWTNMTPDPKKEPQGPLVDAIKEKFGSL
HHHHCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
EAMMKEFKAASQGVEGSGWGILGVDPISKTLVICGAEKHQNLEIPGLVPILVCDVWEHAY
HHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
YLKHQNLRADYIEDFCRLINWDDVERRYQEAMAS
HHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
TKQQAPSTIGYADGKYVLPPLPYAYDALEPMLDEKTVRIHHDKHHAAYVAGANAAAEKL
CCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCCEEEEECCCCCEEEEECCHHHHHHH
REIADGKLDASATTNWVRNLSFNASGHVLHTIYWTNMTPDPKKEPQGPLVDAIKEKFGSL
HHHHCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
EAMMKEFKAASQGVEGSGWGILGVDPISKTLVICGAEKHQNLEIPGLVPILVCDVWEHAY
HHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
YLKHQNLRADYIEDFCRLINWDDVERRYQEAMAS
HHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10382966 [H]