Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is yngK [H]

Identifier: 187736082

GI number: 187736082

Start: 1916220

End: 1917680

Strand: Reverse

Name: yngK [H]

Synonym: Amuc_1593

Alternate gene names: 187736082

Gene position: 1917680-1916220 (Counterclockwise)

Preceding gene: 187736083

Following gene: 187736081

Centisome position: 71.98

GC content: 63.52

Gene sequence:

>1461_bases
ATGACCAGATTTCCCCTGTTCCATGCCTTCTCCTGCTCCCTGCTGGCCCTGGCTTCCCAGGCGCTTGGGTGGCAGACCTC
CGGAGAATCCGTTCCCGCTGTCCCCCAGGAATTCCGCGCGGCATGGATATCCACCGTTCATAATATTGACTGGCCCTCCC
GTTCCGGCCTCTCCGGAGCAGCCCAGCGCGCGGAGCTGCTGAACATCCTGAATACCTGCGCCCAGTTGAAGCTGAACGCC
GTGTTTCTCCAAGTGCGCCCGAACGCCGACGCCCTGTACCGCTCTTCTCTGGAACCGTGGAGCCAATGGCTTTCCGGCCC
GGGCGTCAATCCTGGGTATGATCCTCTGGCTTTCGCCATTCAGGAGGCTCACCGCCGCGGCATTGAACTGCACGCCTGGT
TCAACCCATTCCGGGCGAAGGCCAACGTCAAGCATGCCGTAGGCCGCAACCATATTTCCCTCACGCGCCCTGATTTGATG
AAGCGAAACGGCTCCGTGCTGCTGATAAACCCCAGCGCCTCCGCCTCCCGCGACCACGCGCTGAAGGTTATCATGGATGT
CGTGCGCCGCTACGACATTGACGGGGTGCACCTGGACGACTATTTCTACCCCTATCCCACTCCCGGCCGCGCCTGGTCTC
CCGCCAGCTTTGGAGACGGGAAATCCCCCTCCCAGCGCCGGGGCTACATTGACGGCTTCGTGCAAGACATGTACAAATCC
GTCAAATCTTCCAAACCCTGGGTGCGGGTGGGCGTCAGCCCGTTCGGCATCTGGAGGCCGGGCGTTCCCGGCGGCATTGA
AGCGGGAGTGGACGCCTACGAGCATCTGGCGTGCGACGCCCGCAAGTGGCTTTCCCGCGGATGGGTGGATTACCTGGCCC
CCCAGCTTTACTGGCGCTGCAGCCCGGCCAAGCAGAGCTTTCCCGCATTGATGCAATGGTGGGCCGCCCAGAACTCCAGA
CGCCCGGTGTGGCCCGGCATTGCCACGGCACGTATCATGAGCAGCGAAGACCCGGGCCGCCCCGCCTCTGAAATAGCGGC
GCAGGTCAACTACTCCCGCAGCCTTGCCAGAACCGCCCCCGGGCAATGCTTCTGGAGCATCAAATCCATCATGCGGAATG
CCGGAGGCATCCAGAAATACCTGAACAGATTGTACCCCTCCATGGCCGTTCCGCCCGCCATGCCCTGGTGCGGAACCGGC
ACACCCGGACAACCGCAGAATTTTTATGTGGCGGACAATGGTTCCACCGTAACCCTCTCCTGGCAGCCGTCCGGCAATCC
CTCCCGGAAATGGGCCGTCCAGGCGCGCTACGGCAGCCAGTGGGCTACGCGCATCCTTCTGCCGGGCAGCCAGACCCGCG
TAACCCTGCCCAAATCCTTCCTGGGGGATGCGGGGTCTGTCGCCGTCAGGGGCGTCAGCGCCTATGGAGCCCAGGGCCCG
GCAGCAGCCGCCAGAAGGTAG

Upstream 100 bases:

>100_bases
TGAGGGCCGCCTGTCCATGACGGAACCTCCGGCATCCGTCATGGACAGATCCTCCGAATAGGCTTTAAATGTTCCGGAAA
CATCCCTCTCCATTCCCGTC

Downstream 100 bases:

>100_bases
AAAAGCTTTTTCCCAGCTGCCTCTACAAGAAGAAAAATAGAACACCGAGGTTCCTGTTTTTTGAACAACTCCAAAACAAT
CCATGTCTAAACACCCATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 486; Mature: 485

Protein sequence:

>486_residues
MTRFPLFHAFSCSLLALASQALGWQTSGESVPAVPQEFRAAWISTVHNIDWPSRSGLSGAAQRAELLNILNTCAQLKLNA
VFLQVRPNADALYRSSLEPWSQWLSGPGVNPGYDPLAFAIQEAHRRGIELHAWFNPFRAKANVKHAVGRNHISLTRPDLM
KRNGSVLLINPSASASRDHALKVIMDVVRRYDIDGVHLDDYFYPYPTPGRAWSPASFGDGKSPSQRRGYIDGFVQDMYKS
VKSSKPWVRVGVSPFGIWRPGVPGGIEAGVDAYEHLACDARKWLSRGWVDYLAPQLYWRCSPAKQSFPALMQWWAAQNSR
RPVWPGIATARIMSSEDPGRPASEIAAQVNYSRSLARTAPGQCFWSIKSIMRNAGGIQKYLNRLYPSMAVPPAMPWCGTG
TPGQPQNFYVADNGSTVTLSWQPSGNPSRKWAVQARYGSQWATRILLPGSQTRVTLPKSFLGDAGSVAVRGVSAYGAQGP
AAAARR

Sequences:

>Translated_486_residues
MTRFPLFHAFSCSLLALASQALGWQTSGESVPAVPQEFRAAWISTVHNIDWPSRSGLSGAAQRAELLNILNTCAQLKLNA
VFLQVRPNADALYRSSLEPWSQWLSGPGVNPGYDPLAFAIQEAHRRGIELHAWFNPFRAKANVKHAVGRNHISLTRPDLM
KRNGSVLLINPSASASRDHALKVIMDVVRRYDIDGVHLDDYFYPYPTPGRAWSPASFGDGKSPSQRRGYIDGFVQDMYKS
VKSSKPWVRVGVSPFGIWRPGVPGGIEAGVDAYEHLACDARKWLSRGWVDYLAPQLYWRCSPAKQSFPALMQWWAAQNSR
RPVWPGIATARIMSSEDPGRPASEIAAQVNYSRSLARTAPGQCFWSIKSIMRNAGGIQKYLNRLYPSMAVPPAMPWCGTG
TPGQPQNFYVADNGSTVTLSWQPSGNPSRKWAVQARYGSQWATRILLPGSQTRVTLPKSFLGDAGSVAVRGVSAYGAQGP
AAAARR
>Mature_485_residues
TRFPLFHAFSCSLLALASQALGWQTSGESVPAVPQEFRAAWISTVHNIDWPSRSGLSGAAQRAELLNILNTCAQLKLNAV
FLQVRPNADALYRSSLEPWSQWLSGPGVNPGYDPLAFAIQEAHRRGIELHAWFNPFRAKANVKHAVGRNHISLTRPDLMK
RNGSVLLINPSASASRDHALKVIMDVVRRYDIDGVHLDDYFYPYPTPGRAWSPASFGDGKSPSQRRGYIDGFVQDMYKSV
KSSKPWVRVGVSPFGIWRPGVPGGIEAGVDAYEHLACDARKWLSRGWVDYLAPQLYWRCSPAKQSFPALMQWWAAQNSRR
PVWPGIATARIMSSEDPGRPASEIAAQVNYSRSLARTAPGQCFWSIKSIMRNAGGIQKYLNRLYPSMAVPPAMPWCGTGT
PGQPQNFYVADNGSTVTLSWQPSGNPSRKWAVQARYGSQWATRILLPGSQTRVTLPKSFLGDAGSVAVRGVSAYGAQGPA
AAARR

Specific function: Unknown

COG id: COG1649

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Attached to the membrane by a lipid anchor (Potential) [C]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0748 family [H]

Homologues:

Organism=Escherichia coli, GI1787767, Length=353, Percent_Identity=31.728045325779, Blast_Score=187, Evalue=2e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003790
- InterPro:   IPR017853 [H]

Pfam domain/function: PF02638 DUF187 [H]

EC number: NA

Molecular weight: Translated: 53494; Mature: 53363

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRFPLFHAFSCSLLALASQALGWQTSGESVPAVPQEFRAAWISTVHNIDWPSRSGLSGA
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHH
AQRAELLNILNTCAQLKLNAVFLQVRPNADALYRSSLEPWSQWLSGPGVNPGYDPLAFAI
HHHHHHHHHHHHHHHEEEEEEEEEECCCCHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHH
QEAHRRGIELHAWFNPFRAKANVKHAVGRNHISLTRPDLMKRNGSVLLINPSASASRDHA
HHHHHCCCEEEEECCCHHHCCCHHHHHCCCCEEECCCHHHHCCCCEEEECCCCCCCHHHH
LKVIMDVVRRYDIDGVHLDDYFYPYPTPGRAWSPASFGDGKSPSQRRGYIDGFVQDMYKS
HHHHHHHHHHCCCCCEEECCEECCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHH
VKSSKPWVRVGVSPFGIWRPGVPGGIEAGVDAYEHLACDARKWLSRGWVDYLAPQLYWRC
HHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHEEEC
SPAKQSFPALMQWWAAQNSRRPVWPGIATARIMSSEDPGRPASEIAAQVNYSRSLARTAP
CCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHCCC
GQCFWSIKSIMRNAGGIQKYLNRLYPSMAVPPAMPWCGTGTPGQPQNFYVADNGSTVTLS
CHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEE
WQPSGNPSRKWAVQARYGSQWATRILLPGSQTRVTLPKSFLGDAGSVAVRGVSAYGAQGP
ECCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEECCHHHCCCCCCEEEEEHHHCCCCCC
AAAARR
HHHCCC
>Mature Secondary Structure 
TRFPLFHAFSCSLLALASQALGWQTSGESVPAVPQEFRAAWISTVHNIDWPSRSGLSGA
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHH
AQRAELLNILNTCAQLKLNAVFLQVRPNADALYRSSLEPWSQWLSGPGVNPGYDPLAFAI
HHHHHHHHHHHHHHHEEEEEEEEEECCCCHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHH
QEAHRRGIELHAWFNPFRAKANVKHAVGRNHISLTRPDLMKRNGSVLLINPSASASRDHA
HHHHHCCCEEEEECCCHHHCCCHHHHHCCCCEEECCCHHHHCCCCEEEECCCCCCCHHHH
LKVIMDVVRRYDIDGVHLDDYFYPYPTPGRAWSPASFGDGKSPSQRRGYIDGFVQDMYKS
HHHHHHHHHHCCCCCEEECCEECCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHH
VKSSKPWVRVGVSPFGIWRPGVPGGIEAGVDAYEHLACDARKWLSRGWVDYLAPQLYWRC
HHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHEEEC
SPAKQSFPALMQWWAAQNSRRPVWPGIATARIMSSEDPGRPASEIAAQVNYSRSLARTAP
CCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHCCC
GQCFWSIKSIMRNAGGIQKYLNRLYPSMAVPPAMPWCGTGTPGQPQNFYVADNGSTVTLS
CHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEE
WQPSGNPSRKWAVQARYGSQWATRILLPGSQTRVTLPKSFLGDAGSVAVRGVSAYGAQGP
ECCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEECCHHHCCCCCCEEEEEHHHCCCCCC
AAAARR
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]