Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736072
Identifier: 187736072
GI number: 187736072
Start: 1903703
End: 1904371
Strand: Reverse
Name: 187736072
Synonym: Amuc_1583
Alternate gene names: NA
Gene position: 1904371-1903703 (Counterclockwise)
Preceding gene: 187736073
Following gene: 187736071
Centisome position: 71.48
GC content: 53.96
Gene sequence:
>669_bases ATGAAAAATCATTCCGCATACCGCCGGCTCCGGGAGGCAAAGGGGTTCACCCTCATGGAAATCCTGGTAGTGATGGTGAT CATCGTGGTGCTGGCCACGCTGACCATCTCCATTTACACCTGGCTTGAAACCAGAAAGAACGAACAGGCTACGGAATCCA TTGTCCGCAAAATTGAAATGGGGCTGGAGAGCTACCACAGCGACCATGACCGCTACCCCTACGGCACGGAAGCTCCCTTC AACAATCACGGCGTAGCCGTGGCCAACGGGGAGGAATACAGTTCCAACGTGGTTTACATGGCTCTGTTCGGCGACCATAA GAATGAGGGTGTTCCTTCCAGGGATACAACCATTTACAATGATGAGTTGAACCCCTCTACGCAGCCCAAAAGCAACCCGA CTGTCCGGGAAGTCCATGTGAAAAGCAAGGACGGCAGGCCGGTTACCCTTTATATTCTTGCGGATCCATGGGGTTCCCCC TACCGCTACCGCCTGGGCAGCGAGCAGTCCATCCCCACCAGAACCGACAGGGCCAGAAACCTGAAAATGGGCAACGGCCT GAATCCGGATTATGATTTCTGGTCTTTCGGAAAAGACGGGGACAGTGATTTGAAAGACCCGCACGCCCCTGAAAACGAAG ATGACATCGGCAACCTGCCGAAGTTCTGA
Upstream 100 bases:
>100_bases CGTATTCCTGGCCGTGGTCGTGGGCGGCATCGTGTTCGCCATGTTCCTTCCCCTCCTGCAGGTTATTGAAAAGATGGGAT AACCCCTCAAGCAGAATCAG
Downstream 100 bases:
>100_bases CCTTACCGGTATTTTTCCGCGCACGGCTTCTTTTCCGGCAGCCTTCCTCCTCTTCCGGCGGAGGAAGGCTTTGTGCATAT TTTCTGGCATCCGCACGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MKNHSAYRRLREAKGFTLMEILVVMVIIVVLATLTISIYTWLETRKNEQATESIVRKIEMGLESYHSDHDRYPYGTEAPF NNHGVAVANGEEYSSNVVYMALFGDHKNEGVPSRDTTIYNDELNPSTQPKSNPTVREVHVKSKDGRPVTLYILADPWGSP YRYRLGSEQSIPTRTDRARNLKMGNGLNPDYDFWSFGKDGDSDLKDPHAPENEDDIGNLPKF
Sequences:
>Translated_222_residues MKNHSAYRRLREAKGFTLMEILVVMVIIVVLATLTISIYTWLETRKNEQATESIVRKIEMGLESYHSDHDRYPYGTEAPF NNHGVAVANGEEYSSNVVYMALFGDHKNEGVPSRDTTIYNDELNPSTQPKSNPTVREVHVKSKDGRPVTLYILADPWGSP YRYRLGSEQSIPTRTDRARNLKMGNGLNPDYDFWSFGKDGDSDLKDPHAPENEDDIGNLPKF >Mature_222_residues MKNHSAYRRLREAKGFTLMEILVVMVIIVVLATLTISIYTWLETRKNEQATESIVRKIEMGLESYHSDHDRYPYGTEAPF NNHGVAVANGEEYSSNVVYMALFGDHKNEGVPSRDTTIYNDELNPSTQPKSNPTVREVHVKSKDGRPVTLYILADPWGSP YRYRLGSEQSIPTRTDRARNLKMGNGLNPDYDFWSFGKDGDSDLKDPHAPENEDDIGNLPKF
Specific function: Unknown
COG id: COG4968
COG function: function code NU; Tfp pilus assembly protein PilE
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25241; Mature: 25241
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNHSAYRRLREAKGFTLMEILVVMVIIVVLATLTISIYTWLETRKNEQATESIVRKIEM CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH GLESYHSDHDRYPYGTEAPFNNHGVAVANGEEYSSNVVYMALFGDHKNEGVPSRDTTIYN HHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCEEEC DELNPSTQPKSNPTVREVHVKSKDGRPVTLYILADPWGSPYRYRLGSEQSIPTRTDRARN CCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCHHHHC LKMGNGLNPDYDFWSFGKDGDSDLKDPHAPENEDDIGNLPKF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKNHSAYRRLREAKGFTLMEILVVMVIIVVLATLTISIYTWLETRKNEQATESIVRKIEM CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH GLESYHSDHDRYPYGTEAPFNNHGVAVANGEEYSSNVVYMALFGDHKNEGVPSRDTTIYN HHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCEEEC DELNPSTQPKSNPTVREVHVKSKDGRPVTLYILADPWGSPYRYRLGSEQSIPTRTDRARN CCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCHHHHC LKMGNGLNPDYDFWSFGKDGDSDLKDPHAPENEDDIGNLPKF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA