Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736061
Identifier: 187736061
GI number: 187736061
Start: 1895174
End: 1895842
Strand: Direct
Name: 187736061
Synonym: Amuc_1571
Alternate gene names: NA
Gene position: 1895174-1895842 (Clockwise)
Preceding gene: 187736057
Following gene: 187736062
Centisome position: 71.14
GC content: 63.23
Gene sequence:
>669_bases ATGCAAGATGTCCTGCTGGTTCTGGAAACTTCCTGTGTGCAGTCTTCCGTTGCGGCTTGGAGCGGGGAAAGTCTGCTGTG CCAGGCGGCATGGAGAGCGGAGCGCAACCATTCCTCCGCTATTTTCAAGGCGGTGCGGCAGGTTCTGGATGCTTTGGAAG GGCGGCGTTTGAAGGAAATCGTGGTAGGTTCCGGTCCGGGCGCTTACGGCGGAATCCGCGTAGCGCTGGCCGTGGCGGAC GGCCTTTCCCTGGTGCACGGTTCCCGCGTGGCGGCTTTTTCCTCCTGGAACGGACTTGGTCTGCATCATGGTGAGGCCTG CGTAATGTCAGATGCCCGGCGTGGCGGCTGGACGTGGGGGAGGCTGGAAAACGGCGTTCTGACGGATGTGCCGGCAGTGC TTCCTGCAGAGCAGGCCCGCGTCAGCGTGGCGGAGTGCATGGGAAAAGGCGTGCCCGTTTTTTCCACGGAAACGGCGGAA CATCTGGCCGCCCGGGAAATGTCGGGGATTGTCCCCGTGTATCCTTCTGCAGAGGCGCTCGGGGCCGCGTGGCTGTCCCT GGCGGAGGCCCGCAGAGAAGAACTTCTGGAAAGTCCGGCGGAACCGCTGTATGTGAGGGCTCCGCACATCACCCGCGCCA AACGTCCCGCATGGGCCGTGAAGGCGTAA
Upstream 100 bases:
>100_bases TAAAGGGACTTGAGGAGAAATGCGAACCAAATTTGCCTCTTCCGGAAACCGGAGGAAAAAATGTTTTATCCACGCCGGCT GTTCCTGTATAATCCGCCGC
Downstream 100 bases:
>100_bases TTAAGGTTTGACTTTTTGGAAGATTGTTAGACTTTTAACCGGTAATATTCACCACCAGTAGCATTTTTTAACATGAGCAA TGACACTTTTTCCGAGCGCC
Product: peptidase M22 glycoprotease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MQDVLLVLETSCVQSSVAAWSGESLLCQAAWRAERNHSSAIFKAVRQVLDALEGRRLKEIVVGSGPGAYGGIRVALAVAD GLSLVHGSRVAAFSSWNGLGLHHGEACVMSDARRGGWTWGRLENGVLTDVPAVLPAEQARVSVAECMGKGVPVFSTETAE HLAAREMSGIVPVYPSAEALGAAWLSLAEARREELLESPAEPLYVRAPHITRAKRPAWAVKA
Sequences:
>Translated_222_residues MQDVLLVLETSCVQSSVAAWSGESLLCQAAWRAERNHSSAIFKAVRQVLDALEGRRLKEIVVGSGPGAYGGIRVALAVAD GLSLVHGSRVAAFSSWNGLGLHHGEACVMSDARRGGWTWGRLENGVLTDVPAVLPAEQARVSVAECMGKGVPVFSTETAE HLAAREMSGIVPVYPSAEALGAAWLSLAEARREELLESPAEPLYVRAPHITRAKRPAWAVKA >Mature_222_residues MQDVLLVLETSCVQSSVAAWSGESLLCQAAWRAERNHSSAIFKAVRQVLDALEGRRLKEIVVGSGPGAYGGIRVALAVAD GLSLVHGSRVAAFSSWNGLGLHHGEACVMSDARRGGWTWGRLENGVLTDVPAVLPAEQARVSVAECMGKGVPVFSTETAE HLAAREMSGIVPVYPSAEALGAAWLSLAEARREELLESPAEPLYVRAPHITRAKRPAWAVKA
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23600; Mature: 23600
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDVLLVLETSCVQSSVAAWSGESLLCQAAWRAERNHSSAIFKAVRQVLDALEGRRLKEI CCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEHE VVGSGPGAYGGIRVALAVADGLSLVHGSRVAAFSSWNGLGLHHGEACVMSDARRGGWTWG EEECCCCCCCHHEEEEEHHCCHHHHCCCCEEEECCCCCCCCCCCCCHHHCCCCCCCCCHH RLENGVLTDVPAVLPAEQARVSVAECMGKGVPVFSTETAEHLAAREMSGIVPVYPSAEAL HCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHCCCCCCCCCHHHH GAAWLSLAEARREELLESPAEPLYVRAPHITRAKRPAWAVKA HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MQDVLLVLETSCVQSSVAAWSGESLLCQAAWRAERNHSSAIFKAVRQVLDALEGRRLKEI CCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEHE VVGSGPGAYGGIRVALAVADGLSLVHGSRVAAFSSWNGLGLHHGEACVMSDARRGGWTWG EEECCCCCCCHHEEEEEHHCCHHHHCCCCEEEECCCCCCCCCCCCCHHHCCCCCCCCCHH RLENGVLTDVPAVLPAEQARVSVAECMGKGVPVFSTETAEHLAAREMSGIVPVYPSAEAL HCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHCCCCCCCCCHHHH GAAWLSLAEARREELLESPAEPLYVRAPHITRAKRPAWAVKA HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA