Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736050

Identifier: 187736050

GI number: 187736050

Start: 1874068

End: 1874856

Strand: Direct

Name: 187736050

Synonym: Amuc_1560

Alternate gene names: NA

Gene position: 1874068-1874856 (Clockwise)

Preceding gene: 187736049

Following gene: 187736057

Centisome position: 70.35

GC content: 55.39

Gene sequence:

>789_bases
ATGAAGAAATCCTTGTTGTCTTTAGCTTTAATCTCAAGTACCTTGCTTGCCGTAGAGGCGGCAACGGTGCAAATTGATTT
CGGACGCAGTGACGCCACGACGGACGGCGTGCTCAATATGAATTATGATAGTGCCTCCGCCGCTTTGGGCAGCATGCCGG
GAAGCGTTTCTTTGGCATGGAGTACGGCAGAATGGCCTGTAGGGGATAATGGCCATACCACCACCAAGACAGTTGAGGAA
GAAGCCGATTGGAAAAATCCTTTCAACGGCAGCATGCCTTTCAGCTTGGGGGACACTTTTCGTGACGGTCTTTTAACGCA
GACGGCCGACGGGTCCGGCTCTTTCACTGTAACGTTCAGCGGTCTTGCCGCCGGGGAGTATTCCTTGTCCATCTTTGGAG
GTTTCACAGGCAAGGATGCATTTGCCGGTCAAACCTGGACGATCGGAAACGCCGATGCTTCCAATGCCGTCTGGACAAGC
TTCGGCACAGACGCCAGCGGGAACTGGGCCGAAATTTCTTCCGTGACGGGCGATAATTCCGGAGTCCTTACTCCGGCGAA
CGCTTCCACTTCCAGCGCTACTGCTAATAAAGGGCTTTATGCTACGGTAGAGAATGTCGTGGTAGGGGAAGACGGGACGC
TTACCCTTACGATTCAGGGGGATGGGAGCAAGGGGTACGGCCTTACAGCCCTTAATTACCTTTCCCTGACGCAGGTGCCG
GAACCCGCTACGGCAGCATTGAGCCTGCTGGGCGCTGCTGCCCTGTTCCTGCGCCGCCGCAGGGACTGA

Upstream 100 bases:

>100_bases
GGAAGATGATTTATCCCAAAAAAATAAACGTAATACATGATTAAATTTTCATGATTTGCCATTGACACCGGATTGTTAAT
TCGGTTTACTTCGTTTTGCC

Downstream 100 bases:

>100_bases
CCGGAAAGAACAGACCTTTGTTATCAACGCCGCTCCGTAATTCACGCGGAGCGGTTTTTTTATTTGGCGTTTTTCCTTTC
CCTGTCTATACAGCAGGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MKKSLLSLALISSTLLAVEAATVQIDFGRSDATTDGVLNMNYDSASAALGSMPGSVSLAWSTAEWPVGDNGHTTTKTVEE
EADWKNPFNGSMPFSLGDTFRDGLLTQTADGSGSFTVTFSGLAAGEYSLSIFGGFTGKDAFAGQTWTIGNADASNAVWTS
FGTDASGNWAEISSVTGDNSGVLTPANASTSSATANKGLYATVENVVVGEDGTLTLTIQGDGSKGYGLTALNYLSLTQVP
EPATAALSLLGAAALFLRRRRD

Sequences:

>Translated_262_residues
MKKSLLSLALISSTLLAVEAATVQIDFGRSDATTDGVLNMNYDSASAALGSMPGSVSLAWSTAEWPVGDNGHTTTKTVEE
EADWKNPFNGSMPFSLGDTFRDGLLTQTADGSGSFTVTFSGLAAGEYSLSIFGGFTGKDAFAGQTWTIGNADASNAVWTS
FGTDASGNWAEISSVTGDNSGVLTPANASTSSATANKGLYATVENVVVGEDGTLTLTIQGDGSKGYGLTALNYLSLTQVP
EPATAALSLLGAAALFLRRRRD
>Mature_262_residues
MKKSLLSLALISSTLLAVEAATVQIDFGRSDATTDGVLNMNYDSASAALGSMPGSVSLAWSTAEWPVGDNGHTTTKTVEE
EADWKNPFNGSMPFSLGDTFRDGLLTQTADGSGSFTVTFSGLAAGEYSLSIFGGFTGKDAFAGQTWTIGNADASNAVWTS
FGTDASGNWAEISSVTGDNSGVLTPANASTSSATANKGLYATVENVVVGEDGTLTLTIQGDGSKGYGLTALNYLSLTQVP
EPATAALSLLGAAALFLRRRRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26927; Mature: 26927

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSLLSLALISSTLLAVEAATVQIDFGRSDATTDGVLNMNYDSASAALGSMPGSVSLAW
CCHHHHHHHHHHHHHEEEEEEEEEEECCCCCCCCCCEEEECCCHHHHHHHCCCCCEEEEE
STAEWPVGDNGHTTTKTVEEEADWKNPFNGSMPFSLGDTFRDGLLTQTADGSGSFTVTFS
ECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCEEEECCCCCEEEEEEE
GLAAGEYSLSIFGGFTGKDAFAGQTWTIGNADASNAVWTSFGTDASGNWAEISSVTGDNS
CEECCCEEEEEEECCCCCCCCCCCEEEECCCCCCCCEEEECCCCCCCCEEEEEEECCCCC
GVLTPANASTSSATANKGLYATVENVVVGEDGTLTLTIQGDGSKGYGLTALNYLSLTQVP
CEEECCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEECCCC
EPATAALSLLGAAALFLRRRRD
CHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKSLLSLALISSTLLAVEAATVQIDFGRSDATTDGVLNMNYDSASAALGSMPGSVSLAW
CCHHHHHHHHHHHHHEEEEEEEEEEECCCCCCCCCCEEEECCCHHHHHHHCCCCCEEEEE
STAEWPVGDNGHTTTKTVEEEADWKNPFNGSMPFSLGDTFRDGLLTQTADGSGSFTVTFS
ECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCEEEECCCCCEEEEEEE
GLAAGEYSLSIFGGFTGKDAFAGQTWTIGNADASNAVWTSFGTDASGNWAEISSVTGDNS
CEECCCEEEEEEECCCCCCCCCCCEEEECCCCCCCCEEEECCCCCCCCEEEEEEECCCCC
GVLTPANASTSSATANKGLYATVENVVVGEDGTLTLTIQGDGSKGYGLTALNYLSLTQVP
CEEECCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEECCCC
EPATAALSLLGAAALFLRRRRD
CHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA