Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187736049

Identifier: 187736049

GI number: 187736049

Start: 1872429

End: 1873814

Strand: Direct

Name: 187736049

Synonym: Amuc_1559

Alternate gene names: NA

Gene position: 1872429-1873814 (Clockwise)

Preceding gene: 187736048

Following gene: 187736050

Centisome position: 70.28

GC content: 57.0

Gene sequence:

>1386_bases
ATGAAGCAGTCACTGGCGGCGCGTTTCCTGTTCCGGGCGGTGGTGCTGGCGTTTCTTGTGTATGCCATGCTGCTTACCTG
GTGGACTCCTTTCACTGGGGACAGCTTCATGCATTCCGTGTTCGGGGCGGACCACCGCCTTGCTTTTCAGCCCGTGCTGG
AGCGGTGCTGGTGGTCATACATGCACTGGAATCCCCGGCTGGGAGAGTTCCTCGCTATTTTTACAGCTACGGCGGGAAAA
TGGCTTTTTCTGGCCCTCAATCCCTGCGTGCTCCTTTCCCTGGCGTTGATGATGTTTTTTCTGGCGCGGGGAAGAAGGGT
CAATTCCGGAAACTGGCGGGATGTGCTGCTGTTTACCGTGGGAGCGCTTCTTTTGCTTACGTCTTCATCCAGGCCGGGGA
TCACGATGTTCTGGCTGTCCGGAGGGACCAATTACGCCTGGTCGGCCGCCATCTGGCTGGGTTTCCTGTGCCTGTATCGC
TCCTTATGGGCTGGAACTTCCCGGATTAGGGACACTCCTTTTTCCTGGCTCTGGATAGGCGGCATGGCTTTTGCCGCCGG
CATGACGAATGAGAACCAGATTCCCGCTTCCCTGGGCATGCTGTTCGTGTACTGGTTTTACGCCCGCTGCCGGGGAATGG
TTCTCCCTTGCTGGTTTTTCATTGGCTGGGGATTCCATGCGCTGGGAGGGGCCTTTCTTCTGCTGGCTCCGGGCAATGCG
GCCCGCCTTCATTCGGAGACGGCGGGCGGCGCAGCCGTTCTCCATTCCTGGGGGGAGCGTTTCAGCGCCATTCCGGAATT
GGTAAACGCCTTTTATGAATTCATGCCGATTCCTAAAATTTTGCTGGCCGTTGCCGCTGCCGCTCTGATCCTGCTGACTG
TGGAAGCGGGGATAAACGTCTGGCGGGGGAAGGCCGGGCGGCGTATGTGCGTCTCCCTGCTGTTTATTCTGGTGGCTCAT
GCCATGGCAATCAGCTTTTTTGTACGCGTGATTCCGGCATGGCACGCCATGTTTTCCGCCACGGTATTGATGATGACGGG
AATTCTGGGATTGTACGGGGTATGGATGGATGCCGTGCGAAGGCGGTGGCTCCCATTCTGCGTGCTGCTGGCGGCGGCTG
GTCCGGCCCTGTGGGTATGCTCCGGATATCTGGATGCTTTTCCCCGTATCCACCGCCAGTGCGAGGAACGGAAAATGTTC
ATCCGCCATGAATTGGAACAAGGCAAGAAAAACATTACGGTTCCTCCTTATGATTCCGTTCCTTTGGCCCCTTATGTTTC
CGTTATGTGGCGTATGAGCAGCGGGGATCCGGATGAATTTATCAATCGTTCCGTAGCCCGGTATTTGGGGATTGAAAGCA
TCCGGGTGGCTGTTCCGGAACCGTGA

Upstream 100 bases:

>100_bases
GGGGGATTTCTTTGGCAAGAAGCCGGACAAGCTGCCCACCCCGGTATTCAAGGCCGTCGCGGATTAGTTGCGGACGGCGT
TTTTTATCCCGGTCTGTTCC

Downstream 100 bases:

>100_bases
CTGCTTTATTCTGGCCGTTTTACAAATCCTTTCCGTTTTTTATTTGAATGCGGGCAAATGTCCGCGGATTAACAATCCGA
TGAATGCCAAGTTGTCTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MKQSLAARFLFRAVVLAFLVYAMLLTWWTPFTGDSFMHSVFGADHRLAFQPVLERCWWSYMHWNPRLGEFLAIFTATAGK
WLFLALNPCVLLSLALMMFFLARGRRVNSGNWRDVLLFTVGALLLLTSSSRPGITMFWLSGGTNYAWSAAIWLGFLCLYR
SLWAGTSRIRDTPFSWLWIGGMAFAAGMTNENQIPASLGMLFVYWFYARCRGMVLPCWFFIGWGFHALGGAFLLLAPGNA
ARLHSETAGGAAVLHSWGERFSAIPELVNAFYEFMPIPKILLAVAAAALILLTVEAGINVWRGKAGRRMCVSLLFILVAH
AMAISFFVRVIPAWHAMFSATVLMMTGILGLYGVWMDAVRRRWLPFCVLLAAAGPALWVCSGYLDAFPRIHRQCEERKMF
IRHELEQGKKNITVPPYDSVPLAPYVSVMWRMSSGDPDEFINRSVARYLGIESIRVAVPEP

Sequences:

>Translated_461_residues
MKQSLAARFLFRAVVLAFLVYAMLLTWWTPFTGDSFMHSVFGADHRLAFQPVLERCWWSYMHWNPRLGEFLAIFTATAGK
WLFLALNPCVLLSLALMMFFLARGRRVNSGNWRDVLLFTVGALLLLTSSSRPGITMFWLSGGTNYAWSAAIWLGFLCLYR
SLWAGTSRIRDTPFSWLWIGGMAFAAGMTNENQIPASLGMLFVYWFYARCRGMVLPCWFFIGWGFHALGGAFLLLAPGNA
ARLHSETAGGAAVLHSWGERFSAIPELVNAFYEFMPIPKILLAVAAAALILLTVEAGINVWRGKAGRRMCVSLLFILVAH
AMAISFFVRVIPAWHAMFSATVLMMTGILGLYGVWMDAVRRRWLPFCVLLAAAGPALWVCSGYLDAFPRIHRQCEERKMF
IRHELEQGKKNITVPPYDSVPLAPYVSVMWRMSSGDPDEFINRSVARYLGIESIRVAVPEP
>Mature_461_residues
MKQSLAARFLFRAVVLAFLVYAMLLTWWTPFTGDSFMHSVFGADHRLAFQPVLERCWWSYMHWNPRLGEFLAIFTATAGK
WLFLALNPCVLLSLALMMFFLARGRRVNSGNWRDVLLFTVGALLLLTSSSRPGITMFWLSGGTNYAWSAAIWLGFLCLYR
SLWAGTSRIRDTPFSWLWIGGMAFAAGMTNENQIPASLGMLFVYWFYARCRGMVLPCWFFIGWGFHALGGAFLLLAPGNA
ARLHSETAGGAAVLHSWGERFSAIPELVNAFYEFMPIPKILLAVAAAALILLTVEAGINVWRGKAGRRMCVSLLFILVAH
AMAISFFVRVIPAWHAMFSATVLMMTGILGLYGVWMDAVRRRWLPFCVLLAAAGPALWVCSGYLDAFPRIHRQCEERKMF
IRHELEQGKKNITVPPYDSVPLAPYVSVMWRMSSGDPDEFINRSVARYLGIESIRVAVPEP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51888; Mature: 51888

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQSLAARFLFRAVVLAFLVYAMLLTWWTPFTGDSFMHSVFGADHRLAFQPVLERCWWSY
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
MHWNPRLGEFLAIFTATAGKWLFLALNPCVLLSLALMMFFLARGRRVNSGNWRDVLLFTV
HCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
GALLLLTSSSRPGITMFWLSGGTNYAWSAAIWLGFLCLYRSLWAGTSRIRDTPFSWLWIG
HHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHH
GMAFAAGMTNENQIPASLGMLFVYWFYARCRGMVLPCWFFIGWGFHALGGAFLLLAPGNA
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEECCCH
ARLHSETAGGAAVLHSWGERFSAIPELVNAFYEFMPIPKILLAVAAAALILLTVEAGINV
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHH
WRGKAGRRMCVSLLFILVAHAMAISFFVRVIPAWHAMFSATVLMMTGILGLYGVWMDAVR
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRWLPFCVLLAAAGPALWVCSGYLDAFPRIHRQCEERKMFIRHELEQGKKNITVPPYDSV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PLAPYVSVMWRMSSGDPDEFINRSVARYLGIESIRVAVPEP
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHEEEECCCC
>Mature Secondary Structure
MKQSLAARFLFRAVVLAFLVYAMLLTWWTPFTGDSFMHSVFGADHRLAFQPVLERCWWSY
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
MHWNPRLGEFLAIFTATAGKWLFLALNPCVLLSLALMMFFLARGRRVNSGNWRDVLLFTV
HCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
GALLLLTSSSRPGITMFWLSGGTNYAWSAAIWLGFLCLYRSLWAGTSRIRDTPFSWLWIG
HHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHH
GMAFAAGMTNENQIPASLGMLFVYWFYARCRGMVLPCWFFIGWGFHALGGAFLLLAPGNA
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEECCCH
ARLHSETAGGAAVLHSWGERFSAIPELVNAFYEFMPIPKILLAVAAAALILLTVEAGINV
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHH
WRGKAGRRMCVSLLFILVAHAMAISFFVRVIPAWHAMFSATVLMMTGILGLYGVWMDAVR
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRWLPFCVLLAAAGPALWVCSGYLDAFPRIHRQCEERKMFIRHELEQGKKNITVPPYDSV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PLAPYVSVMWRMSSGDPDEFINRSVARYLGIESIRVAVPEP
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA