Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is 187736049
Identifier: 187736049
GI number: 187736049
Start: 1872429
End: 1873814
Strand: Direct
Name: 187736049
Synonym: Amuc_1559
Alternate gene names: NA
Gene position: 1872429-1873814 (Clockwise)
Preceding gene: 187736048
Following gene: 187736050
Centisome position: 70.28
GC content: 57.0
Gene sequence:
>1386_bases ATGAAGCAGTCACTGGCGGCGCGTTTCCTGTTCCGGGCGGTGGTGCTGGCGTTTCTTGTGTATGCCATGCTGCTTACCTG GTGGACTCCTTTCACTGGGGACAGCTTCATGCATTCCGTGTTCGGGGCGGACCACCGCCTTGCTTTTCAGCCCGTGCTGG AGCGGTGCTGGTGGTCATACATGCACTGGAATCCCCGGCTGGGAGAGTTCCTCGCTATTTTTACAGCTACGGCGGGAAAA TGGCTTTTTCTGGCCCTCAATCCCTGCGTGCTCCTTTCCCTGGCGTTGATGATGTTTTTTCTGGCGCGGGGAAGAAGGGT CAATTCCGGAAACTGGCGGGATGTGCTGCTGTTTACCGTGGGAGCGCTTCTTTTGCTTACGTCTTCATCCAGGCCGGGGA TCACGATGTTCTGGCTGTCCGGAGGGACCAATTACGCCTGGTCGGCCGCCATCTGGCTGGGTTTCCTGTGCCTGTATCGC TCCTTATGGGCTGGAACTTCCCGGATTAGGGACACTCCTTTTTCCTGGCTCTGGATAGGCGGCATGGCTTTTGCCGCCGG CATGACGAATGAGAACCAGATTCCCGCTTCCCTGGGCATGCTGTTCGTGTACTGGTTTTACGCCCGCTGCCGGGGAATGG TTCTCCCTTGCTGGTTTTTCATTGGCTGGGGATTCCATGCGCTGGGAGGGGCCTTTCTTCTGCTGGCTCCGGGCAATGCG GCCCGCCTTCATTCGGAGACGGCGGGCGGCGCAGCCGTTCTCCATTCCTGGGGGGAGCGTTTCAGCGCCATTCCGGAATT GGTAAACGCCTTTTATGAATTCATGCCGATTCCTAAAATTTTGCTGGCCGTTGCCGCTGCCGCTCTGATCCTGCTGACTG TGGAAGCGGGGATAAACGTCTGGCGGGGGAAGGCCGGGCGGCGTATGTGCGTCTCCCTGCTGTTTATTCTGGTGGCTCAT GCCATGGCAATCAGCTTTTTTGTACGCGTGATTCCGGCATGGCACGCCATGTTTTCCGCCACGGTATTGATGATGACGGG AATTCTGGGATTGTACGGGGTATGGATGGATGCCGTGCGAAGGCGGTGGCTCCCATTCTGCGTGCTGCTGGCGGCGGCTG GTCCGGCCCTGTGGGTATGCTCCGGATATCTGGATGCTTTTCCCCGTATCCACCGCCAGTGCGAGGAACGGAAAATGTTC ATCCGCCATGAATTGGAACAAGGCAAGAAAAACATTACGGTTCCTCCTTATGATTCCGTTCCTTTGGCCCCTTATGTTTC CGTTATGTGGCGTATGAGCAGCGGGGATCCGGATGAATTTATCAATCGTTCCGTAGCCCGGTATTTGGGGATTGAAAGCA TCCGGGTGGCTGTTCCGGAACCGTGA
Upstream 100 bases:
>100_bases GGGGGATTTCTTTGGCAAGAAGCCGGACAAGCTGCCCACCCCGGTATTCAAGGCCGTCGCGGATTAGTTGCGGACGGCGT TTTTTATCCCGGTCTGTTCC
Downstream 100 bases:
>100_bases CTGCTTTATTCTGGCCGTTTTACAAATCCTTTCCGTTTTTTATTTGAATGCGGGCAAATGTCCGCGGATTAACAATCCGA TGAATGCCAAGTTGTCTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 461; Mature: 461
Protein sequence:
>461_residues MKQSLAARFLFRAVVLAFLVYAMLLTWWTPFTGDSFMHSVFGADHRLAFQPVLERCWWSYMHWNPRLGEFLAIFTATAGK WLFLALNPCVLLSLALMMFFLARGRRVNSGNWRDVLLFTVGALLLLTSSSRPGITMFWLSGGTNYAWSAAIWLGFLCLYR SLWAGTSRIRDTPFSWLWIGGMAFAAGMTNENQIPASLGMLFVYWFYARCRGMVLPCWFFIGWGFHALGGAFLLLAPGNA ARLHSETAGGAAVLHSWGERFSAIPELVNAFYEFMPIPKILLAVAAAALILLTVEAGINVWRGKAGRRMCVSLLFILVAH AMAISFFVRVIPAWHAMFSATVLMMTGILGLYGVWMDAVRRRWLPFCVLLAAAGPALWVCSGYLDAFPRIHRQCEERKMF IRHELEQGKKNITVPPYDSVPLAPYVSVMWRMSSGDPDEFINRSVARYLGIESIRVAVPEP
Sequences:
>Translated_461_residues MKQSLAARFLFRAVVLAFLVYAMLLTWWTPFTGDSFMHSVFGADHRLAFQPVLERCWWSYMHWNPRLGEFLAIFTATAGK WLFLALNPCVLLSLALMMFFLARGRRVNSGNWRDVLLFTVGALLLLTSSSRPGITMFWLSGGTNYAWSAAIWLGFLCLYR SLWAGTSRIRDTPFSWLWIGGMAFAAGMTNENQIPASLGMLFVYWFYARCRGMVLPCWFFIGWGFHALGGAFLLLAPGNA ARLHSETAGGAAVLHSWGERFSAIPELVNAFYEFMPIPKILLAVAAAALILLTVEAGINVWRGKAGRRMCVSLLFILVAH AMAISFFVRVIPAWHAMFSATVLMMTGILGLYGVWMDAVRRRWLPFCVLLAAAGPALWVCSGYLDAFPRIHRQCEERKMF IRHELEQGKKNITVPPYDSVPLAPYVSVMWRMSSGDPDEFINRSVARYLGIESIRVAVPEP >Mature_461_residues MKQSLAARFLFRAVVLAFLVYAMLLTWWTPFTGDSFMHSVFGADHRLAFQPVLERCWWSYMHWNPRLGEFLAIFTATAGK WLFLALNPCVLLSLALMMFFLARGRRVNSGNWRDVLLFTVGALLLLTSSSRPGITMFWLSGGTNYAWSAAIWLGFLCLYR SLWAGTSRIRDTPFSWLWIGGMAFAAGMTNENQIPASLGMLFVYWFYARCRGMVLPCWFFIGWGFHALGGAFLLLAPGNA ARLHSETAGGAAVLHSWGERFSAIPELVNAFYEFMPIPKILLAVAAAALILLTVEAGINVWRGKAGRRMCVSLLFILVAH AMAISFFVRVIPAWHAMFSATVLMMTGILGLYGVWMDAVRRRWLPFCVLLAAAGPALWVCSGYLDAFPRIHRQCEERKMF IRHELEQGKKNITVPPYDSVPLAPYVSVMWRMSSGDPDEFINRSVARYLGIESIRVAVPEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51888; Mature: 51888
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQSLAARFLFRAVVLAFLVYAMLLTWWTPFTGDSFMHSVFGADHRLAFQPVLERCWWSY CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH MHWNPRLGEFLAIFTATAGKWLFLALNPCVLLSLALMMFFLARGRRVNSGNWRDVLLFTV HCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH GALLLLTSSSRPGITMFWLSGGTNYAWSAAIWLGFLCLYRSLWAGTSRIRDTPFSWLWIG HHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHH GMAFAAGMTNENQIPASLGMLFVYWFYARCRGMVLPCWFFIGWGFHALGGAFLLLAPGNA HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEECCCH ARLHSETAGGAAVLHSWGERFSAIPELVNAFYEFMPIPKILLAVAAAALILLTVEAGINV HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHH WRGKAGRRMCVSLLFILVAHAMAISFFVRVIPAWHAMFSATVLMMTGILGLYGVWMDAVR HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRWLPFCVLLAAAGPALWVCSGYLDAFPRIHRQCEERKMFIRHELEQGKKNITVPPYDSV HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC PLAPYVSVMWRMSSGDPDEFINRSVARYLGIESIRVAVPEP CCHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHEEEECCCC >Mature Secondary Structure MKQSLAARFLFRAVVLAFLVYAMLLTWWTPFTGDSFMHSVFGADHRLAFQPVLERCWWSY CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH MHWNPRLGEFLAIFTATAGKWLFLALNPCVLLSLALMMFFLARGRRVNSGNWRDVLLFTV HCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH GALLLLTSSSRPGITMFWLSGGTNYAWSAAIWLGFLCLYRSLWAGTSRIRDTPFSWLWIG HHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHH GMAFAAGMTNENQIPASLGMLFVYWFYARCRGMVLPCWFFIGWGFHALGGAFLLLAPGNA HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEECCCH ARLHSETAGGAAVLHSWGERFSAIPELVNAFYEFMPIPKILLAVAAAALILLTVEAGINV HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHH WRGKAGRRMCVSLLFILVAHAMAISFFVRVIPAWHAMFSATVLMMTGILGLYGVWMDAVR HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRWLPFCVLLAAAGPALWVCSGYLDAFPRIHRQCEERKMFIRHELEQGKKNITVPPYDSV HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC PLAPYVSVMWRMSSGDPDEFINRSVARYLGIESIRVAVPEP CCHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA