Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736037
Identifier: 187736037
GI number: 187736037
Start: 1858942
End: 1860729
Strand: Direct
Name: 187736037
Synonym: Amuc_1547
Alternate gene names: NA
Gene position: 1858942-1860729 (Clockwise)
Preceding gene: 187736036
Following gene: 187736039
Centisome position: 69.78
GC content: 55.82
Gene sequence:
>1788_bases ATGAAAAACCTGTTGTTTGCATTGTTGACCGGTTCCTTTTGTTGCTGTTATGCCCAACAGAAGGCCGCACCCGTTCCGGA ACCTGAAGTTGTCGCCACTCCGCCGGCTGATGCGGGGCGCGGCCTTATCCGTGTGGACTCCCGTGAAATACGCCATTATT CCGGTACCCGCAAGGAACCGGATTACCTGGTCAGCAGGGATAACGGAAAAACATGGGAAATGAAGGCCGCTCCGGCTGGC TACCCTCCCAACTACGGTGGCATTCCCAAAGAATCTCCAGCTATTGTGCGCAACCCTCTGACCAGGGAATTCATTCGTGT GCAGCCTATCGGGGGCTTTGTATTTCTTTCCAGGGGTGGGCTGGACGGCAAGTGGCTTGCCGTCACGAATGACGGCAAAC TGGAAGAAGACTGGAAAGACCCGGAAAAGAGGAAAAACCTGAAAAAACTGGGCGGCATCATGCGAACCCCCGTTTTTGTG AACAAGGGCCGCAGGGTGATCGTGCCGTTCCACAACATGGGCGGCGGCACCAAGTTCCATATTTCCGATGACGGGGGGCT GACCTGGCATGTATCCAGGAACGGTGTTACTTCCCCCAGACATGAAGCCAGGCCCCCCCACCAGGGCGTCAGATGGTTCA ACAATGCCGTGGAAGCCACGGTTTTGGAAATGAAAGACGGTACGTTGTGGGCGCTTGCCCGCACCTCCCAGGACCAGGCG TGGCAGGCTTTTTCCAAGGATTACGGGGAAACGTGGAGCAAACCGGAGCCTTCCCGCTTTTTCGGCACCCTGACCATGAA CACGTTGGGACGCCTGGATGACGGAACTATCGTTTCCCTGTGGACGAATACAATGGCTCTGCCTGAAAACGCCACAGCTG GCAACGGAACGTGGGAGGATGTATTCACCAACCGTGATTCCCACCACATTGCTATGTCCGGGGACGAGGGCAAAACCTGG TACGGGTTCCGGGAGATTATCCTGGACGAACACCGCAACCATCCCGGCTATGCTACGCTGGATGGTCCGGAAGACCGCGG CAAACATCAGAGCGAAATGGTGCAGCTGGACAAAAACCGCATCCTTATTTCCCTGGGGCAGCATAAAAACCACCGCCGCC TGGTTATTGTGGACCGCCGCTGGGTAGGGGCCAAGACGCGTGCCACGCAGACGGGGAAAGATTTGGATTCCCAGTGGACC ATTCACACTTATATCCCCCAGAAAAAAGGCCATTGCAGTTATAACCGCAAGCCTTCCGCCGAGTTGGTTCAGGATCCGTC CGGGGGCACGAAGAAGGTGTTGCAAATCAAGCGTCTGGATGATCCCGAACTGGTCAATGAAAAATCCAATGTGGATTACC GGAACGGCGGAGCTACCTGGAACTTTCCGAACGGGACCACGGGGCTGGTCAAATTCCGCTTCCGTGTAGTGGACGGGGAG CAGGCGGATGATTCCGGCCTTCAGGTCTCTCTGACGGACCGGCTGTTTAATGCCTGTGATTCCACTACGAAGGATTATGC CCTGTTTACCTTCCCGATCAGGCTGAAACCTGCGCCCCATCTGTTGCTGGGGATGAAAAAAGTGCCTTTCACGCCCGGCG CGTGGCATGAAATTTCCCTTCTTTGGCAGGGTGGGCAGGCCGTGGTGTCTCTGGACGGAAAGAAGGCCGGAACGTTGAAA ATGGCTAATAAGTCCCCCAATGGAGCCAGTTATATCCATTTCATCAGCACCGGGTCCCAACCGGATGCCGGCATTCTGCT GGATACGGTGAATGCCCGGGTGAAGTAA
Upstream 100 bases:
>100_bases GGGAAAGCATTCCTGATGATCGTCTTCTGATGGAAGGTAGGATTTTGCTTGAAGGGAAAGCCCCGGTTGAGGAAAATATA CGGCCTTTGATATTTAGTTT
Downstream 100 bases:
>100_bases GGAGCGGCGGGATTCAATGGTTTTCCTTCTTCGGAAGCGGCGGAGCGCTTAATTCCGGCAGGTATTTCAGCACCATCTGG AGATGTTCGTTTGACCGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 595; Mature: 595
Protein sequence:
>595_residues MKNLLFALLTGSFCCCYAQQKAAPVPEPEVVATPPADAGRGLIRVDSREIRHYSGTRKEPDYLVSRDNGKTWEMKAAPAG YPPNYGGIPKESPAIVRNPLTREFIRVQPIGGFVFLSRGGLDGKWLAVTNDGKLEEDWKDPEKRKNLKKLGGIMRTPVFV NKGRRVIVPFHNMGGGTKFHISDDGGLTWHVSRNGVTSPRHEARPPHQGVRWFNNAVEATVLEMKDGTLWALARTSQDQA WQAFSKDYGETWSKPEPSRFFGTLTMNTLGRLDDGTIVSLWTNTMALPENATAGNGTWEDVFTNRDSHHIAMSGDEGKTW YGFREIILDEHRNHPGYATLDGPEDRGKHQSEMVQLDKNRILISLGQHKNHRRLVIVDRRWVGAKTRATQTGKDLDSQWT IHTYIPQKKGHCSYNRKPSAELVQDPSGGTKKVLQIKRLDDPELVNEKSNVDYRNGGATWNFPNGTTGLVKFRFRVVDGE QADDSGLQVSLTDRLFNACDSTTKDYALFTFPIRLKPAPHLLLGMKKVPFTPGAWHEISLLWQGGQAVVSLDGKKAGTLK MANKSPNGASYIHFISTGSQPDAGILLDTVNARVK
Sequences:
>Translated_595_residues MKNLLFALLTGSFCCCYAQQKAAPVPEPEVVATPPADAGRGLIRVDSREIRHYSGTRKEPDYLVSRDNGKTWEMKAAPAG YPPNYGGIPKESPAIVRNPLTREFIRVQPIGGFVFLSRGGLDGKWLAVTNDGKLEEDWKDPEKRKNLKKLGGIMRTPVFV NKGRRVIVPFHNMGGGTKFHISDDGGLTWHVSRNGVTSPRHEARPPHQGVRWFNNAVEATVLEMKDGTLWALARTSQDQA WQAFSKDYGETWSKPEPSRFFGTLTMNTLGRLDDGTIVSLWTNTMALPENATAGNGTWEDVFTNRDSHHIAMSGDEGKTW YGFREIILDEHRNHPGYATLDGPEDRGKHQSEMVQLDKNRILISLGQHKNHRRLVIVDRRWVGAKTRATQTGKDLDSQWT IHTYIPQKKGHCSYNRKPSAELVQDPSGGTKKVLQIKRLDDPELVNEKSNVDYRNGGATWNFPNGTTGLVKFRFRVVDGE QADDSGLQVSLTDRLFNACDSTTKDYALFTFPIRLKPAPHLLLGMKKVPFTPGAWHEISLLWQGGQAVVSLDGKKAGTLK MANKSPNGASYIHFISTGSQPDAGILLDTVNARVK >Mature_595_residues MKNLLFALLTGSFCCCYAQQKAAPVPEPEVVATPPADAGRGLIRVDSREIRHYSGTRKEPDYLVSRDNGKTWEMKAAPAG YPPNYGGIPKESPAIVRNPLTREFIRVQPIGGFVFLSRGGLDGKWLAVTNDGKLEEDWKDPEKRKNLKKLGGIMRTPVFV NKGRRVIVPFHNMGGGTKFHISDDGGLTWHVSRNGVTSPRHEARPPHQGVRWFNNAVEATVLEMKDGTLWALARTSQDQA WQAFSKDYGETWSKPEPSRFFGTLTMNTLGRLDDGTIVSLWTNTMALPENATAGNGTWEDVFTNRDSHHIAMSGDEGKTW YGFREIILDEHRNHPGYATLDGPEDRGKHQSEMVQLDKNRILISLGQHKNHRRLVIVDRRWVGAKTRATQTGKDLDSQWT IHTYIPQKKGHCSYNRKPSAELVQDPSGGTKKVLQIKRLDDPELVNEKSNVDYRNGGATWNFPNGTTGLVKFRFRVVDGE QADDSGLQVSLTDRLFNACDSTTKDYALFTFPIRLKPAPHLLLGMKKVPFTPGAWHEISLLWQGGQAVVSLDGKKAGTLK MANKSPNGASYIHFISTGSQPDAGILLDTVNARVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66288; Mature: 66288
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLLFALLTGSFCCCYAQQKAAPVPEPEVVATPPADAGRGLIRVDSREIRHYSGTRKEP CCHHEEEHHHCCEEEEEEHHCCCCCCCCCEEECCCCCCCCCEEEECCHHHHHCCCCCCCC DYLVSRDNGKTWEMKAAPAGYPPNYGGIPKESPAIVRNPLTREFIRVQPIGGFVFLSRGG CEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEEECCCEEEEECCC LDGKWLAVTNDGKLEEDWKDPEKRKNLKKLGGIMRTPVFVNKGRRVIVPFHNMGGGTKFH CCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCHHCCCEEEECCCEEEEEEECCCCCEEEE ISDDGGLTWHVSRNGVTSPRHEARPPHQGVRWFNNAVEATVLEMKDGTLWALARTSQDQA EECCCCEEEEEECCCCCCCHHHCCCCHHHHHHHHHCCEEEEEEECCCEEEEEEECCCHHH WQAFSKDYGETWSKPEPSRFFGTLTMNTLGRLDDGTIVSLWTNTMALPENATAGNGTWED HHHHHHHHCCCCCCCCCCCEEEEEEHHHHCCCCCCCEEEEECCCEECCCCCCCCCCCHHH VFTNRDSHHIAMSGDEGKTWYGFREIILDEHRNHPGYATLDGPEDRGKHQSEMVQLDKNR HHCCCCCCEEEEECCCCCEEHHHHHHHHHHCCCCCCEEECCCCHHCCCCHHHHHEECCCE ILISLGQHKNHRRLVIVDRRWVGAKTRATQTGKDLDSQWTIHTYIPQKKGHCSYNRKPSA EEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCH ELVQDPSGGTKKVLQIKRLDDPELVNEKSNVDYRNGGATWNFPNGTTGLVKFRFRVVDGE HHEECCCCCCEEEEEEECCCCHHHHCCCCCCCCCCCCCEEECCCCCEEEEEEEEEEECCC QADDSGLQVSLTDRLFNACDSTTKDYALFTFPIRLKPAPHLLLGMKKVPFTPGAWHEISL CCCCCCCEEEEHHHHHHHHCCCCCCEEEEEEEEEECCCCHHEECCCCCCCCCCCCEEEEE LWQGGQAVVSLDGKKAGTLKMANKSPNGASYIHFISTGSQPDAGILLDTVNARVK EEECCEEEEEECCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCC >Mature Secondary Structure MKNLLFALLTGSFCCCYAQQKAAPVPEPEVVATPPADAGRGLIRVDSREIRHYSGTRKEP CCHHEEEHHHCCEEEEEEHHCCCCCCCCCEEECCCCCCCCCEEEECCHHHHHCCCCCCCC DYLVSRDNGKTWEMKAAPAGYPPNYGGIPKESPAIVRNPLTREFIRVQPIGGFVFLSRGG CEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEEECCCEEEEECCC LDGKWLAVTNDGKLEEDWKDPEKRKNLKKLGGIMRTPVFVNKGRRVIVPFHNMGGGTKFH CCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCHHCCCEEEECCCEEEEEEECCCCCEEEE ISDDGGLTWHVSRNGVTSPRHEARPPHQGVRWFNNAVEATVLEMKDGTLWALARTSQDQA EECCCCEEEEEECCCCCCCHHHCCCCHHHHHHHHHCCEEEEEEECCCEEEEEEECCCHHH WQAFSKDYGETWSKPEPSRFFGTLTMNTLGRLDDGTIVSLWTNTMALPENATAGNGTWED HHHHHHHHCCCCCCCCCCCEEEEEEHHHHCCCCCCCEEEEECCCEECCCCCCCCCCCHHH VFTNRDSHHIAMSGDEGKTWYGFREIILDEHRNHPGYATLDGPEDRGKHQSEMVQLDKNR HHCCCCCCEEEEECCCCCEEHHHHHHHHHHCCCCCCEEECCCCHHCCCCHHHHHEECCCE ILISLGQHKNHRRLVIVDRRWVGAKTRATQTGKDLDSQWTIHTYIPQKKGHCSYNRKPSA EEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCH ELVQDPSGGTKKVLQIKRLDDPELVNEKSNVDYRNGGATWNFPNGTTGLVKFRFRVVDGE HHEECCCCCCEEEEEEECCCCHHHHCCCCCCCCCCCCCEEECCCCCEEEEEEEEEEECCC QADDSGLQVSLTDRLFNACDSTTKDYALFTFPIRLKPAPHLLLGMKKVPFTPGAWHEISL CCCCCCCEEEEHHHHHHHHCCCCCCEEEEEEEEEECCCCHHEECCCCCCCCCCCCEEEEE LWQGGQAVVSLDGKKAGTLKMANKSPNGASYIHFISTGSQPDAGILLDTVNARVK EEECCEEEEEECCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA