Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736036

Identifier: 187736036

GI number: 187736036

Start: 1858069

End: 1858857

Strand: Direct

Name: 187736036

Synonym: Amuc_1546

Alternate gene names: NA

Gene position: 1858069-1858857 (Clockwise)

Preceding gene: 187736035

Following gene: 187736037

Centisome position: 69.74

GC content: 54.12

Gene sequence:

>789_bases
ATGAATTTCCTCTCCTACATGCTCGCCATATTGCTGGGGAGTTCCAGTCTGGCATTTTCTGCGCCTTCCATTCCGGCCTC
CGCGTTGCCCGCTACCCTGAAGCCGGAGCCCCATCAGCGGGACCCGTATGATTGGAATGCCCGGCATGAAGCCGTTAAAA
AAAGAAACCGGGCCGTCAAGCCTGAATACGTGATGATAGGGGACAGCATTACCCACCATTGGGGAGGGGAGCCTTCCGGG
GACGGAAAAAATACGGGATCGGGGTCCTGGGAGAAATTATTCGGTCCGCATGCAGCGACGAATATGGGCTTTGGATTTGA
TTATGTGGATAATGCCTATTACCGTGTCCAAAACGGGGAGCTGGACGGCATTTCTCCGCGGGTCATCATTGTGTTGCTGG
GGACCAATAATCTGGGGCACCGCAAGGATACGCCGCAGGCATGTGCGGACAATATCAGGGCATTTGTCCGCCTAGTGCGC
CGGAAGTGCCCCTCTTCCAAAATCCTGTTGCTGGGCGTTCTCCCACGGAAGGAGAAAAACCTGGCGGAACCGGTGAAGCA
GACGAACAGACTGTTGGTGGAACTGCATAACGGAAAGGACATTTTCTTTGCCGATCCGGGAAAGGCGCTTCTTTCCGCAG
ATGGTGCTTCTCCGCAGAATGAATTCATGAAGGATGTGGTGCATCCCAATGCCAGGGGGTACGAGGTTTTGGAAAAGGAA
CTGGCCGTACTCCTGAAAAAGATTGATGCAAAATACCGGGGAGGGAAGCAGGCGGGAAAGCATTCCTGA

Upstream 100 bases:

>100_bases
CGGGCAGTGGTCTTTTTTACTCTGCCGGAGGAAGTGACGCCTGCGATCTTGATGCACGGCAGAATTTGCTTAAACTGAAA
ACCGGTTTTACTTTTTGATT

Downstream 100 bases:

>100_bases
TGATCGTCTTCTGATGGAAGGTAGGATTTTGCTTGAAGGGAAAGCCCCGGTTGAGGAAAATATACGGCCTTTGATATTTA
GTTTATGAAAAACCTGTTGT

Product: lipolytic protein G-D-S-L family

Products: NA

Alternate protein names: GDSL Family Lipase; Mucin-Desulfating Sulfatase; Acetylhydrolase; 1-Alkyl-2-Acetylglycerophosphocholine Esterase; Exo-1 4-Beta-Glucosidase; Sialate O-Acetylesterase; Acetylhydrolase Lipase_gdsl Protein; GDSL-Like Lipase/Acylhydrolase Domain-Containing Protein; 1 4-Beta-D-Glucan Glucohydrolase Cel3D; Glycoside Hydrolase Family 3 Domain Protein; Lipolytic G-D-S-L; GDSL-Like Lipase/Acylhydrolase; Lipolytic GDSL Family; Lipase/Acylhydrolase Family Protein; Platelet-Activating Factor Acetylhydrolase IB Gamma Subunit

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MNFLSYMLAILLGSSSLAFSAPSIPASALPATLKPEPHQRDPYDWNARHEAVKKRNRAVKPEYVMIGDSITHHWGGEPSG
DGKNTGSGSWEKLFGPHAATNMGFGFDYVDNAYYRVQNGELDGISPRVIIVLLGTNNLGHRKDTPQACADNIRAFVRLVR
RKCPSSKILLLGVLPRKEKNLAEPVKQTNRLLVELHNGKDIFFADPGKALLSADGASPQNEFMKDVVHPNARGYEVLEKE
LAVLLKKIDAKYRGGKQAGKHS

Sequences:

>Translated_262_residues
MNFLSYMLAILLGSSSLAFSAPSIPASALPATLKPEPHQRDPYDWNARHEAVKKRNRAVKPEYVMIGDSITHHWGGEPSG
DGKNTGSGSWEKLFGPHAATNMGFGFDYVDNAYYRVQNGELDGISPRVIIVLLGTNNLGHRKDTPQACADNIRAFVRLVR
RKCPSSKILLLGVLPRKEKNLAEPVKQTNRLLVELHNGKDIFFADPGKALLSADGASPQNEFMKDVVHPNARGYEVLEKE
LAVLLKKIDAKYRGGKQAGKHS
>Mature_262_residues
MNFLSYMLAILLGSSSLAFSAPSIPASALPATLKPEPHQRDPYDWNARHEAVKKRNRAVKPEYVMIGDSITHHWGGEPSG
DGKNTGSGSWEKLFGPHAATNMGFGFDYVDNAYYRVQNGELDGISPRVIIVLLGTNNLGHRKDTPQACADNIRAFVRLVR
RKCPSSKILLLGVLPRKEKNLAEPVKQTNRLLVELHNGKDIFFADPGKALLSADGASPQNEFMKDVVHPNARGYEVLEKE
LAVLLKKIDAKYRGGKQAGKHS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI225543099, Length=214, Percent_Identity=31.7757009345794, Blast_Score=95, Evalue=6e-20,
Organism=Homo sapiens, GI225543097, Length=214, Percent_Identity=31.7757009345794, Blast_Score=95, Evalue=6e-20,
Organism=Homo sapiens, GI4505587, Length=214, Percent_Identity=31.7757009345794, Blast_Score=95, Evalue=6e-20,
Organism=Homo sapiens, GI4505585, Length=209, Percent_Identity=30.622009569378, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI296080766, Length=142, Percent_Identity=29.5774647887324, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI296080768, Length=139, Percent_Identity=29.4964028776978, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24642291, Length=199, Percent_Identity=24.6231155778894, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24642289, Length=199, Percent_Identity=24.6231155778894, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28851; Mature: 28851

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFLSYMLAILLGSSSLAFSAPSIPASALPATLKPEPHQRDPYDWNARHEAVKKRNRAVK
CCHHHHHHHHHHCCCCCEECCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
PEYVMIGDSITHHWGGEPSGDGKNTGSGSWEKLFGPHAATNMGFGFDYVDNAYYRVQNGE
CCEEEECCCHHHCCCCCCCCCCCCCCCCCHHHHCCCCHHCCCCCCCCCCCCCEEEEECCC
LDGISPRVIIVLLGTNNLGHRKDTPQACADNIRAFVRLVRRKCPSSKILLLGVLPRKEKN
CCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHH
LAEPVKQTNRLLVELHNGKDIFFADPGKALLSADGASPQNEFMKDVVHPNARGYEVLEKE
HHHHHHHHCEEEEEEECCCEEEEECCCCCEEECCCCCCHHHHHHHHHCCCCCCHHHHHHH
LAVLLKKIDAKYRGGKQAGKHS
HHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNFLSYMLAILLGSSSLAFSAPSIPASALPATLKPEPHQRDPYDWNARHEAVKKRNRAVK
CCHHHHHHHHHHCCCCCEECCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
PEYVMIGDSITHHWGGEPSGDGKNTGSGSWEKLFGPHAATNMGFGFDYVDNAYYRVQNGE
CCEEEECCCHHHCCCCCCCCCCCCCCCCCHHHHCCCCHHCCCCCCCCCCCCCEEEEECCC
LDGISPRVIIVLLGTNNLGHRKDTPQACADNIRAFVRLVRRKCPSSKILLLGVLPRKEKN
CCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHH
LAEPVKQTNRLLVELHNGKDIFFADPGKALLSADGASPQNEFMKDVVHPNARGYEVLEKE
HHHHHHHHCEEEEEEECCCEEEEECCCCCEEECCCCCCHHHHHHHHHCCCCCCHHHHHHH
LAVLLKKIDAKYRGGKQAGKHS
HHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA