Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is yghZ [H]
Identifier: 187736017
GI number: 187736017
Start: 1826814
End: 1827803
Strand: Direct
Name: yghZ [H]
Synonym: Amuc_1527
Alternate gene names: 187736017
Gene position: 1826814-1827803 (Clockwise)
Preceding gene: 187736016
Following gene: 187736018
Centisome position: 68.57
GC content: 58.18
Gene sequence:
>990_bases ATGAATTATCTTCCAGATCCCGGCCGCTATAGCCACGCAGCCTACCGCCGCTGCGGGCGCAGCGGGCTGCTGCTTCCTCC CGTTTCCTTGGGGCTTTGGCATAATTTTGGCGCTGCGGATGATTTTGAGAACGCCCGTCGGCTTATTCACGGCGCGTTTG ATGCCGGTATCACGTATTTTGACCTGGCGAATAATTACGGACCTCCTCCCGGTTCGGCGGAAGAATGCTTTGGCCGTATT TTCATGCAGGATTTGTCCCGTTTCCGTGATGAACTTGTTATTGCAACCAAGGCGGGGCATCTGATGTGGCCCGGCCCGTA TGGGGATTGGGGATCCCGCAAACACATGCTTGCCAGCCTGGACCAGTCCCTTTCCCGCATGAAGCTGGATTATGTGGATA TTTTCTACGCGCACCGGCATGATCCGGAAACTCCCCTTGAAGAAACGGCGGGAGCCCTTGTTACGGCGGTTCGCTCCGGA AAGGCCCTGTATGCCGGTATTTCCAAGTTCCCGGCGGAACAGGCCAGGCAGATGTGCTCCATGCTTGGGGAGGCCGGCGT TCCGTGCCTGGTGCATCAGATCCGGTACAATATGTTTAATCGGGAACCGGAGAAATCCGTTTTTCAGGCTGTTCGGGAAA CGGGTACCGGGTGCGCCGCTTTCTCTCCCCTGGCCCAGGGGATGTTGACGGACCGTTATCTGGAAGGCATTCCCGAAGAT TCCCGCGCGGCGGGTTCCTCCGTCTTTTTAACAAAGGAGCGGGTTCTTCAGCATGGGGATAAAATTCGCCGCCTGGCCGC CCTGGCCCGGAGCCGGGGCCAGAGCCTTGCCCAGATGGCTCTGGCCTGGGTGCTGAAAGATCCCGTAGTGACCACGGCCC TGATTGGAGCCAGCCGCCCCTCGCAAATCAGGGATTGCCTGAAAGCACTGGATAGTGCGCCGTTTACGCCGGAGGAGCTC TCTCTGATTGACGCAGATGCGGATAGATAG
Upstream 100 bases:
>100_bases AACTGCTGGCTTCCAAATACCGTACGGAAGCATGGCGTTCCGGCGTACGGCATGGGCGTCCGTCTCAGCCACGGTAATTC CCCCCCCTTTTTTCTTTCCG
Downstream 100 bases:
>100_bases GCGCTGTTTTTCCCGTGGTGCTGGTCTTTCTGCTGGAAGGGGCATTTCCTGTTCCGGACACAGGTTTTTTCTTGGAGTAA AGTAGAGCTGGTGTTATGTT
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MNYLPDPGRYSHAAYRRCGRSGLLLPPVSLGLWHNFGAADDFENARRLIHGAFDAGITYFDLANNYGPPPGSAEECFGRI FMQDLSRFRDELVIATKAGHLMWPGPYGDWGSRKHMLASLDQSLSRMKLDYVDIFYAHRHDPETPLEETAGALVTAVRSG KALYAGISKFPAEQARQMCSMLGEAGVPCLVHQIRYNMFNREPEKSVFQAVRETGTGCAAFSPLAQGMLTDRYLEGIPED SRAAGSSVFLTKERVLQHGDKIRRLAALARSRGQSLAQMALAWVLKDPVVTTALIGASRPSQIRDCLKALDSAPFTPEEL SLIDADADR
Sequences:
>Translated_329_residues MNYLPDPGRYSHAAYRRCGRSGLLLPPVSLGLWHNFGAADDFENARRLIHGAFDAGITYFDLANNYGPPPGSAEECFGRI FMQDLSRFRDELVIATKAGHLMWPGPYGDWGSRKHMLASLDQSLSRMKLDYVDIFYAHRHDPETPLEETAGALVTAVRSG KALYAGISKFPAEQARQMCSMLGEAGVPCLVHQIRYNMFNREPEKSVFQAVRETGTGCAAFSPLAQGMLTDRYLEGIPED SRAAGSSVFLTKERVLQHGDKIRRLAALARSRGQSLAQMALAWVLKDPVVTTALIGASRPSQIRDCLKALDSAPFTPEEL SLIDADADR >Mature_329_residues MNYLPDPGRYSHAAYRRCGRSGLLLPPVSLGLWHNFGAADDFENARRLIHGAFDAGITYFDLANNYGPPPGSAEECFGRI FMQDLSRFRDELVIATKAGHLMWPGPYGDWGSRKHMLASLDQSLSRMKLDYVDIFYAHRHDPETPLEETAGALVTAVRSG KALYAGISKFPAEQARQMCSMLGEAGVPCLVHQIRYNMFNREPEKSVFQAVRETGTGCAAFSPLAQGMLTDRYLEGIPED SRAAGSSVFLTKERVLQHGDKIRRLAALARSRGQSLAQMALAWVLKDPVVTTALIGASRPSQIRDCLKALDSAPFTPEEL SLIDADADR
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI27436962, Length=321, Percent_Identity=34.5794392523364, Blast_Score=172, Evalue=5e-43, Organism=Homo sapiens, GI27436964, Length=320, Percent_Identity=34.375, Blast_Score=170, Evalue=1e-42, Organism=Homo sapiens, GI27436969, Length=309, Percent_Identity=34.9514563106796, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI27436966, Length=320, Percent_Identity=34.0625, Blast_Score=169, Evalue=5e-42, Organism=Homo sapiens, GI4504825, Length=309, Percent_Identity=34.9514563106796, Blast_Score=168, Evalue=6e-42, Organism=Homo sapiens, GI27436971, Length=327, Percent_Identity=32.4159021406728, Blast_Score=152, Evalue=4e-37, Organism=Homo sapiens, GI41152114, Length=223, Percent_Identity=26.457399103139, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI41327764, Length=225, Percent_Identity=27.1111111111111, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI223718702, Length=225, Percent_Identity=25.3333333333333, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI1789375, Length=329, Percent_Identity=54.4072948328268, Blast_Score=370, Evalue=1e-104, Organism=Escherichia coli, GI87081735, Length=285, Percent_Identity=35.7894736842105, Blast_Score=150, Evalue=2e-37, Organism=Escherichia coli, GI1789199, Length=330, Percent_Identity=27.2727272727273, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1788070, Length=330, Percent_Identity=26.3636363636364, Blast_Score=87, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6325169, Length=336, Percent_Identity=24.4047619047619, Blast_Score=88, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6319958, Length=303, Percent_Identity=25.7425742574257, Blast_Score=86, Evalue=7e-18, Organism=Saccharomyces cerevisiae, GI6323998, Length=324, Percent_Identity=26.2345679012346, Blast_Score=86, Evalue=9e-18, Organism=Saccharomyces cerevisiae, GI6319951, Length=327, Percent_Identity=25.3822629969419, Blast_Score=80, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6322615, Length=253, Percent_Identity=25.6916996047431, Blast_Score=78, Evalue=2e-15, Organism=Drosophila melanogaster, GI24640980, Length=338, Percent_Identity=28.9940828402367, Blast_Score=108, Evalue=6e-24, Organism=Drosophila melanogaster, GI45549126, Length=336, Percent_Identity=28.2738095238095, Blast_Score=107, Evalue=7e-24, Organism=Drosophila melanogaster, GI24646155, Length=314, Percent_Identity=26.4331210191083, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24646159, Length=317, Percent_Identity=24.9211356466877, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR005399 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 36280; Mature: 36280
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYLPDPGRYSHAAYRRCGRSGLLLPPVSLGLWHNFGAADDFENARRLIHGAFDAGITYF CCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHE DLANNYGPPPGSAEECFGRIFMQDLSRFRDELVIATKAGHLMWPGPYGDWGSRKHMLASL EHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCEECCCCCCCCCCHHHHHHHH DQSLSRMKLDYVDIFYAHRHDPETPLEETAGALVTAVRSGKALYAGISKFPAEQARQMCS HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHH MLGEAGVPCLVHQIRYNMFNREPEKSVFQAVRETGTGCAAFSPLAQGMLTDRYLEGIPED HHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC SRAAGSSVFLTKERVLQHGDKIRRLAALARSRGQSLAQMALAWVLKDPVVTTALIGASRP HHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCC SQIRDCLKALDSAPFTPEELSLIDADADR HHHHHHHHHHHCCCCCHHHHHEECCCCCC >Mature Secondary Structure MNYLPDPGRYSHAAYRRCGRSGLLLPPVSLGLWHNFGAADDFENARRLIHGAFDAGITYF CCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHE DLANNYGPPPGSAEECFGRIFMQDLSRFRDELVIATKAGHLMWPGPYGDWGSRKHMLASL EHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCEECCCCCCCCCCHHHHHHHH DQSLSRMKLDYVDIFYAHRHDPETPLEETAGALVTAVRSGKALYAGISKFPAEQARQMCS HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHH MLGEAGVPCLVHQIRYNMFNREPEKSVFQAVRETGTGCAAFSPLAQGMLTDRYLEGIPED HHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC SRAAGSSVFLTKERVLQHGDKIRRLAALARSRGQSLAQMALAWVLKDPVVTTALIGASRP HHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCC SQIRDCLKALDSAPFTPEELSLIDADADR HHHHHHHHHHHCCCCCHHHHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]