Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736015
Identifier: 187736015
GI number: 187736015
Start: 1824889
End: 1825959
Strand: Direct
Name: 187736015
Synonym: Amuc_1525
Alternate gene names: NA
Gene position: 1824889-1825959 (Clockwise)
Preceding gene: 187736014
Following gene: 187736016
Centisome position: 68.5
GC content: 54.06
Gene sequence:
>1071_bases ATGAAGACATTTGCCAAAATCAAATCCGGCGCGTTCACCCTGATTGAGCTCCTGGCAGCCATGACCATCACTACCGTGCT GGTTCTGGTAATTGTGGCCCTGACTTCCCGCGGGGTGGATATCTGGAGATGGGTGCTGCAGGATGTGCGGACCACGACGC TTGCCCGCACGGCCATGGATACCATGACCAAGGATTTTGAAAGCATGCAGTTCCGTTCCGGGAATCCCTTTGAGTGGATG CTGGTGCAGCGGGACAGCGATTTGGTTTCCCGTGCGGGAAAGACCAAGGTTTCCAGGAAAAAGGGCCGCTCCTCCTCCCT GAATGAAGCCCGCGTGAACCTGATGACCATGGGGCCGGAAGGCGCCAAAATCACGAATGCCTCCCAATTGGTTTTCTTTA CCACGGCTACGGACCGCAATCCGGCCAAGTCCAGTATGGACATGAGGAATGACCGCATCATCGGCGATGTGAATTGCGTG GGGTACAAGCTTCTTTACCGTGACCAGATTCTGGACCAGGACGCTACGGCGGAGTCTGACGGTTTTCCCGTTTATTCCCT GTACCGCAACTTAATCAGCGCGGAGGATACCGTGCGTAACCTTCTGGGCCAGCAGGATCTATGGTCCGCTTATGCACGGT ACCAGCAGGATGAAACCGTCCCTTCCAACTTCCTGGTGGAGAATATTGTGGAAATGACGCTGATTTTTGAAGTGGATTAC CAGAAGAAGATCGGCAATTCCGGCAGCAACAAATCGGACAAGGATGCCTCGCAAAGAGCATCCGTGCTGGTTCCGGTCAT GACTACGGGCGCCAACCGTCTCGGCTCCTGCACCCAGATGGATGTGTATGGCAATCGCCTGGACATCATAGGCAGCAGCG TGAATATTGATGATTTGAAATCCGGCCGCGTTACTGCCGTGACAATTTCCATGACGGTGGTGACGGATGAAGGCATGGCT CTTGTGGACCAGATCCGGCAGAAAAAGCGTCCCGCTCCTTCTCCTGAAGAATTTTTCGAACGTTATACCCGGTCTTTCAC CCAGAGGATTGCATTGCCGATGAACCGTTAG
Upstream 100 bases:
>100_bases TTTACAACATCTGACGTGGGAAAATTTAAAGACTCCCGTGTTTACGCGCAATCTCGCTTTCCGCCGTTAGCGGGCATTAT CTGAAGACCTCTGAAAAAAC
Downstream 100 bases:
>100_bases GCCTGTATCCGGGAAACCGGGGAGGGCGGAACGTCCGCTGTTGCTTTTTGCCTGGAGCGTTCCTGCCATTAATTGTTCTG TAGTTGCCATATGTTGGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MKTFAKIKSGAFTLIELLAAMTITTVLVLVIVALTSRGVDIWRWVLQDVRTTTLARTAMDTMTKDFESMQFRSGNPFEWM LVQRDSDLVSRAGKTKVSRKKGRSSSLNEARVNLMTMGPEGAKITNASQLVFFTTATDRNPAKSSMDMRNDRIIGDVNCV GYKLLYRDQILDQDATAESDGFPVYSLYRNLISAEDTVRNLLGQQDLWSAYARYQQDETVPSNFLVENIVEMTLIFEVDY QKKIGNSGSNKSDKDASQRASVLVPVMTTGANRLGSCTQMDVYGNRLDIIGSSVNIDDLKSGRVTAVTISMTVVTDEGMA LVDQIRQKKRPAPSPEEFFERYTRSFTQRIALPMNR
Sequences:
>Translated_356_residues MKTFAKIKSGAFTLIELLAAMTITTVLVLVIVALTSRGVDIWRWVLQDVRTTTLARTAMDTMTKDFESMQFRSGNPFEWM LVQRDSDLVSRAGKTKVSRKKGRSSSLNEARVNLMTMGPEGAKITNASQLVFFTTATDRNPAKSSMDMRNDRIIGDVNCV GYKLLYRDQILDQDATAESDGFPVYSLYRNLISAEDTVRNLLGQQDLWSAYARYQQDETVPSNFLVENIVEMTLIFEVDY QKKIGNSGSNKSDKDASQRASVLVPVMTTGANRLGSCTQMDVYGNRLDIIGSSVNIDDLKSGRVTAVTISMTVVTDEGMA LVDQIRQKKRPAPSPEEFFERYTRSFTQRIALPMNR >Mature_356_residues MKTFAKIKSGAFTLIELLAAMTITTVLVLVIVALTSRGVDIWRWVLQDVRTTTLARTAMDTMTKDFESMQFRSGNPFEWM LVQRDSDLVSRAGKTKVSRKKGRSSSLNEARVNLMTMGPEGAKITNASQLVFFTTATDRNPAKSSMDMRNDRIIGDVNCV GYKLLYRDQILDQDATAESDGFPVYSLYRNLISAEDTVRNLLGQQDLWSAYARYQQDETVPSNFLVENIVEMTLIFEVDY QKKIGNSGSNKSDKDASQRASVLVPVMTTGANRLGSCTQMDVYGNRLDIIGSSVNIDDLKSGRVTAVTISMTVVTDEGMA LVDQIRQKKRPAPSPEEFFERYTRSFTQRIALPMNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39878; Mature: 39878
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTFAKIKSGAFTLIELLAAMTITTVLVLVIVALTSRGVDIWRWVLQDVRTTTLARTAMD CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH TMTKDFESMQFRSGNPFEWMLVQRDSDLVSRAGKTKVSRKKGRSSSLNEARVNLMTMGPE HHHHHHHHHHCCCCCCEEEEEEECCHHHHHHCCCHHHHHHCCCCCCCCHHEEEEEEECCC GAKITNASQLVFFTTATDRNPAKSSMDMRNDRIIGDVNCVGYKLLYRDQILDQDATAESD CCEECCCCEEEEEEECCCCCCCHHHHHCCCCCEEECCHHHHHHHHHHHHHCCCCCCCCCC GFPVYSLYRNLISAEDTVRNLLGQQDLWSAYARYQQDETVPSNFLVENIVEMTLIFEVDY CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEECH QKKIGNSGSNKSDKDASQRASVLVPVMTTGANRLGSCTQMDVYGNRLDIIGSSVNIDDLK HHHCCCCCCCCCCCCHHHHCEEEEEEECCCCCCCCCCEEEECCCCEEEEEECCCCCCCCC SGRVTAVTISMTVVTDEGMALVDQIRQKKRPAPSPEEFFERYTRSFTQRIALPMNR CCCEEEEEEEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKTFAKIKSGAFTLIELLAAMTITTVLVLVIVALTSRGVDIWRWVLQDVRTTTLARTAMD CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH TMTKDFESMQFRSGNPFEWMLVQRDSDLVSRAGKTKVSRKKGRSSSLNEARVNLMTMGPE HHHHHHHHHHCCCCCCEEEEEEECCHHHHHHCCCHHHHHHCCCCCCCCHHEEEEEEECCC GAKITNASQLVFFTTATDRNPAKSSMDMRNDRIIGDVNCVGYKLLYRDQILDQDATAESD CCEECCCCEEEEEEECCCCCCCHHHHHCCCCCEEECCHHHHHHHHHHHHHCCCCCCCCCC GFPVYSLYRNLISAEDTVRNLLGQQDLWSAYARYQQDETVPSNFLVENIVEMTLIFEVDY CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEECH QKKIGNSGSNKSDKDASQRASVLVPVMTTGANRLGSCTQMDVYGNRLDIIGSSVNIDDLK HHHCCCCCCCCCCCCHHHHCEEEEEEECCCCCCCCCCEEEECCCCEEEEEECCCCCCCCC SGRVTAVTISMTVVTDEGMALVDQIRQKKRPAPSPEEFFERYTRSFTQRIALPMNR CCCEEEEEEEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA