Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187736014

Identifier: 187736014

GI number: 187736014

Start: 1824058

End: 1824858

Strand: Direct

Name: 187736014

Synonym: Amuc_1524

Alternate gene names: NA

Gene position: 1824058-1824858 (Clockwise)

Preceding gene: 187736013

Following gene: 187736015

Centisome position: 68.47

GC content: 55.56

Gene sequence:

>801_bases
ATGTTGACCAAGTGTATGAAACAGTCTCGTGCCAAGGGGTTCACCCTGACGGAAGTGGTGCTTGCGATCGGCGTGGTGGC
CGTGCTGATTGTAGTGTTCATGGCCATGTTTATTCCTGCCAGAAGGACGGTTCAGTCCGCCCTGACTATTCGTGAAGCGG
ACCGCATCGTCCACGCCCTGACGGCGGAACTTGGAGAACTCCGCAATTCCGAGCGTGCCGCGTCCAACGCCAGAAAGTCT
TCCTCCTCCAGATATGTTTCCGCTTTTGACAAGGCGTTTTACTGGATGCAGTTCACGTCCAGGCCCGCTACGACCATTCT
TGTTTACAATTACAGGGCGGATTTGACCAAGGGGGCCCGCAAAGACGGAACTCCCCAGCCCTGGCTGGAGGATGGCGGAA
GCATTCCCGGCAAAAATACTGCGGTGGTGACAGGGGTCTGCCTGGCGAACAACAAAGAGCGTTGGGATGATTTCAAGGCC
CTTGTCGGTCCCGTCTTCGCCGTGCGCATGACCCAGCTGGTAGTGGAGCGCATGGATTCAAGCTCCTACGGGTACAAGCT
GGCTCCCAAGTACGGGACGATTTATAATCCTTACAACCGCGGCAAGGTGATTAAGGAACCTTCCCTGTATGTTTATACGC
CGGAGAAAGGCGGCGGCCTGAATTTGCCGTGGGGGGCGGAAGTCCTGTACCAGGCGGAGTTCTTCCAGCTGTTGAATACG
GACCCCGAGCGTTTACAACATCTGACGTGGGAAAATTTAAAGACTCCCGTGTTTACGCGCAATCTCGCTTTCCGCCGTTA
G

Upstream 100 bases:

>100_bases
GCATTGTGATTTATCCCAAAGGCAATATCAGCCGTCTGAGGACGACGGAGCAGGTGATTCCCAATTAGTTTCTGTGATAT
AATACCGGATTTCCCATTTT

Downstream 100 bases:

>100_bases
CGGGCATTATCTGAAGACCTCTGAAAAAACATGAAGACATTTGCCAAAATCAAATCCGGCGCGTTCACCCTGATTGAGCT
CCTGGCAGCCATGACCATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MLTKCMKQSRAKGFTLTEVVLAIGVVAVLIVVFMAMFIPARRTVQSALTIREADRIVHALTAELGELRNSERAASNARKS
SSSRYVSAFDKAFYWMQFTSRPATTILVYNYRADLTKGARKDGTPQPWLEDGGSIPGKNTAVVTGVCLANNKERWDDFKA
LVGPVFAVRMTQLVVERMDSSSYGYKLAPKYGTIYNPYNRGKVIKEPSLYVYTPEKGGGLNLPWGAEVLYQAEFFQLLNT
DPERLQHLTWENLKTPVFTRNLAFRR

Sequences:

>Translated_266_residues
MLTKCMKQSRAKGFTLTEVVLAIGVVAVLIVVFMAMFIPARRTVQSALTIREADRIVHALTAELGELRNSERAASNARKS
SSSRYVSAFDKAFYWMQFTSRPATTILVYNYRADLTKGARKDGTPQPWLEDGGSIPGKNTAVVTGVCLANNKERWDDFKA
LVGPVFAVRMTQLVVERMDSSSYGYKLAPKYGTIYNPYNRGKVIKEPSLYVYTPEKGGGLNLPWGAEVLYQAEFFQLLNT
DPERLQHLTWENLKTPVFTRNLAFRR
>Mature_266_residues
MLTKCMKQSRAKGFTLTEVVLAIGVVAVLIVVFMAMFIPARRTVQSALTIREADRIVHALTAELGELRNSERAASNARKS
SSSRYVSAFDKAFYWMQFTSRPATTILVYNYRADLTKGARKDGTPQPWLEDGGSIPGKNTAVVTGVCLANNKERWDDFKA
LVGPVFAVRMTQLVVERMDSSSYGYKLAPKYGTIYNPYNRGKVIKEPSLYVYTPEKGGGLNLPWGAEVLYQAEFFQLLNT
DPERLQHLTWENLKTPVFTRNLAFRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29950; Mature: 29950

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTKCMKQSRAKGFTLTEVVLAIGVVAVLIVVFMAMFIPARRTVQSALTIREADRIVHAL
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAELGELRNSERAASNARKSSSSRYVSAFDKAFYWMQFTSRPATTILVYNYRADLTKGAR
HHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCCCCEEEEEEECCHHHHCCCC
KDGTPQPWLEDGGSIPGKNTAVVTGVCLANNKERWDDFKALVGPVFAVRMTQLVVERMDS
CCCCCCCHHHCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SSYGYKLAPKYGTIYNPYNRGKVIKEPSLYVYTPEKGGGLNLPWGAEVLYQAEFFQLLNT
CCCCEEECCCCCCCCCCCCCCCEEECCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCC
DPERLQHLTWENLKTPVFTRNLAFRR
CHHHHHHHHHHHCCCCCEECCCCCCC
>Mature Secondary Structure
MLTKCMKQSRAKGFTLTEVVLAIGVVAVLIVVFMAMFIPARRTVQSALTIREADRIVHAL
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAELGELRNSERAASNARKSSSSRYVSAFDKAFYWMQFTSRPATTILVYNYRADLTKGAR
HHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCCCCEEEEEEECCHHHHCCCC
KDGTPQPWLEDGGSIPGKNTAVVTGVCLANNKERWDDFKALVGPVFAVRMTQLVVERMDS
CCCCCCCHHHCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SSYGYKLAPKYGTIYNPYNRGKVIKEPSLYVYTPEKGGGLNLPWGAEVLYQAEFFQLLNT
CCCCEEECCCCCCCCCCCCCCCEEECCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCC
DPERLQHLTWENLKTPVFTRNLAFRR
CHHHHHHHHHHHCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA