Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is zupT
Identifier: 187735974
GI number: 187735974
Start: 1773388
End: 1774200
Strand: Reverse
Name: zupT
Synonym: Amuc_1483
Alternate gene names: 187735974
Gene position: 1774200-1773388 (Counterclockwise)
Preceding gene: 187735975
Following gene: 187735973
Centisome position: 66.6
GC content: 56.21
Gene sequence:
>813_bases ATGGACCTTTCCGCCGACCACATCCTCGTTGTCTTCCTGCTCACCACGCTGGCTGGTCTTGCTACCGGCATAGGAGGCTT CATCGCCTTCTTCATGAAAAGGACGGATACAAAGGCACTTACTTTTGCCCTGGGATTATCCGGCGGAGTCATGGTGTATA TCTCCCTGGTGGAACTGCTGGGAGAAGCCCAGCACAGGTTGATGGAGTTCGAAGGCCATACGGCAGGTTCCTGGATCGCC ATTGCTTCCTTCTTCGGGGGAATTGCCGTGGCGGCTCTGATTGATTACCTGGTTCCGGAAGACGAAAACCCGCACGAAGC GCGCGGACCGGAAGACATCCATGGACAGGCCAGCGGTGAATTTTCCTCATCCCGAATTAAAAGGTCCGGCATTCTGTTCG CCCTGGCCATCGGCATCCACAATTTCCCGGAAGGAATCGCCACCTTTGCCGCCGGATTGGACTCCCTGACTTTAGGCACC TCCATCGCCCTGGCCGTAGCCGTCCATAACATTCCGGAAGGAATAGCCGTGGCGGTACCTCTTTACTACGGTACGGGCAG CCGTAAAAAGGCCCTTTTTTATTCCTTTCTCTCCGGTCTGGCGGAACCGGTGGGCGCGGCCATCGCCATGTTCTTCCTGT TCCACTTCCTCACACCTACCGTACTTGCGGTTCTCTTTGCCTCCGTCGCGGGAATCATGGTCTTCATCTCCTTTGACGAG CTGCTGCCCATGGCGGAACGCTGGGGACACCATCACATTTCCATCATGGGCATCATCGCCGGAATGCTGCTGATGGCGAT TGTCCTGATCTGA
Upstream 100 bases:
>100_bases GCGCCATCCGGGCCACGAAGATGATCGTTCCCACGGCTCCCGCAAAATAATACACCCCTTTCTTTACTGCCGGGGTCATC CCTGCCCGGCAGGTGCACGC
Downstream 100 bases:
>100_bases ACCGGCTGCAGGAGGGAACTTTCCATGTCCTGGGCACAGACGCATTGAGCATTCCCCGGCATCAGGGAGTCTAAACGGAA ACCCCCTTTTCATCCATGCC
Product: zinc/iron permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MDLSADHILVVFLLTTLAGLATGIGGFIAFFMKRTDTKALTFALGLSGGVMVYISLVELLGEAQHRLMEFEGHTAGSWIA IASFFGGIAVAALIDYLVPEDENPHEARGPEDIHGQASGEFSSSRIKRSGILFALAIGIHNFPEGIATFAAGLDSLTLGT SIALAVAVHNIPEGIAVAVPLYYGTGSRKKALFYSFLSGLAEPVGAAIAMFFLFHFLTPTVLAVLFASVAGIMVFISFDE LLPMAERWGHHHISIMGIIAGMLLMAIVLI
Sequences:
>Translated_270_residues MDLSADHILVVFLLTTLAGLATGIGGFIAFFMKRTDTKALTFALGLSGGVMVYISLVELLGEAQHRLMEFEGHTAGSWIA IASFFGGIAVAALIDYLVPEDENPHEARGPEDIHGQASGEFSSSRIKRSGILFALAIGIHNFPEGIATFAAGLDSLTLGT SIALAVAVHNIPEGIAVAVPLYYGTGSRKKALFYSFLSGLAEPVGAAIAMFFLFHFLTPTVLAVLFASVAGIMVFISFDE LLPMAERWGHHHISIMGIIAGMLLMAIVLI >Mature_270_residues MDLSADHILVVFLLTTLAGLATGIGGFIAFFMKRTDTKALTFALGLSGGVMVYISLVELLGEAQHRLMEFEGHTAGSWIA IASFFGGIAVAALIDYLVPEDENPHEARGPEDIHGQASGEFSSSRIKRSGILFALAIGIHNFPEGIATFAAGLDSLTLGT SIALAVAVHNIPEGIAVAVPLYYGTGSRKKALFYSFLSGLAEPVGAAIAMFFLFHFLTPTVLAVLFASVAGIMVFISFDE LLPMAERWGHHHISIMGIIAGMLLMAIVLI
Specific function: Mediates zinc uptake. May also transport other divalent cations
COG id: COG0428
COG function: function code P; Predicted divalent heavy-metal cations transporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily
Homologues:
Organism=Homo sapiens, GI229577422, Length=144, Percent_Identity=31.9444444444444, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI229577418, Length=144, Percent_Identity=31.9444444444444, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI1789419, Length=262, Percent_Identity=40.0763358778626, Blast_Score=153, Evalue=1e-38, Organism=Caenorhabditis elegans, GI17507805, Length=148, Percent_Identity=34.4594594594595, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24652846, Length=166, Percent_Identity=36.7469879518072, Blast_Score=79, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ZUPT_AKKM8 (B2UL32)
Other databases:
- EMBL: CP001071 - RefSeq: YP_001878086.1 - GeneID: 6274660 - GenomeReviews: CP001071_GR - KEGG: amu:Amuc_1483 - HOGENOM: HBG620552 - OMA: VSVPIYY - HAMAP: MF_00548 - InterPro: IPR003689
Pfam domain/function: PF02535 Zip
EC number: NA
Molecular weight: Translated: 28623; Mature: 28623
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1abb7cd0)-; HASH(0x1dae00e8)-; HASH(0x1da6b63c)-; HASH(0x1dae2098)-; HASH(0x1d5de1bc)-; HASH(0x1d051824)-; HASH(0x1c8ba904)-; HASH(0x1da27e98)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLSADHILVVFLLTTLAGLATGIGGFIAFFMKRTDTKALTFALGLSGGVMVYISLVELL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHH GEAQHRLMEFEGHTAGSWIAIASFFGGIAVAALIDYLVPEDENPHEARGPEDIHGQASGE HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC FSSSRIKRSGILFALAIGIHNFPEGIATFAAGLDSLTLGTSIALAVAVHNIPEGIAVAVP HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCEEEEE LYYGTGSRKKALFYSFLSGLAEPVGAAIAMFFLFHFLTPTVLAVLFASVAGIMVFISFDE EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLPMAERWGHHHISIMGIIAGMLLMAIVLI HHHHHHHCCCCHHHHHHHHHHHHHHHHHHH >Mature Secondary Structure MDLSADHILVVFLLTTLAGLATGIGGFIAFFMKRTDTKALTFALGLSGGVMVYISLVELL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHH GEAQHRLMEFEGHTAGSWIAIASFFGGIAVAALIDYLVPEDENPHEARGPEDIHGQASGE HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC FSSSRIKRSGILFALAIGIHNFPEGIATFAAGLDSLTLGTSIALAVAVHNIPEGIAVAVP HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCEEEEE LYYGTGSRKKALFYSFLSGLAEPVGAAIAMFFLFHFLTPTVLAVLFASVAGIMVFISFDE EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLPMAERWGHHHISIMGIIAGMLLMAIVLI HHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA