Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is yhaI [C]
Identifier: 187735973
GI number: 187735973
Start: 1772177
End: 1773292
Strand: Reverse
Name: yhaI [C]
Synonym: Amuc_1482
Alternate gene names: 187735973
Gene position: 1773292-1772177 (Counterclockwise)
Preceding gene: 187735974
Following gene: 187735970
Centisome position: 66.56
GC content: 54.75
Gene sequence:
>1116_bases ATGCCGGAATCTCCTGCTTCTCCTGCTTCTCCTGCTGTTTCCTCCGTTCCTCCAACCTCCACGCAGGCATCTTCCCTCCT TTCCCCCCTCTCCTGCTGGAAAAAAGGTTTTCTTCATTATGCGGACTTTCGGGGCTGCGCTTCCCGTGCGGAATTCTGGT GGTTCATGGCTCTTCCCCTCCTGGCGCTGATTCCAGCCCTGGCAGGGTATATCCTGACGGACTGGCTGCACATCCCTGAT ACAAGACTGAGCATCTACGGAGACGCCTTAACCATCCTCCTGTGGGCGGTGTTATTCATCCCAAGCATATCAGCCGCGTT CAGACGCCTGCATGATACAGGCAGGAGCGGCCTCTGGCTTTTTTCCCTTTTCATTCCCTTCGGGCTGGGGCATCTGATCT TTTTTTATCTGACGCTAGGAGAAAGCAAGGCGGACGGCAACAAATACAGCCGCCGTCCGGAGCCCCAACCGGCTGATCCC CCTGCCGGAAAACTGAAAGAGCAGCCATTGACTCCGTTTTACCTTTACTGGCTCATCAGCCTGCGGAAATTGAATACGGT GGCAGGCCGCGCGTCCCGGACGGAATTCTGGTCCTTTTTCCTCCTTTCCGTCCTCCTGTTCCTTCCGCTGGGCTACAGCA TGATAGACGTTGACAGCCAGCCGGCGGGTTTTTATGTCTCTCCTTCCCTCCAAATCCTGTTATATGCCGCCCATCCGCAA GATGCTCTGATCCTGCTGGCTCACTCCTGCTTCAATCCCACCTTTTACTTTTTCTACCAATCCGGAGAGCTGAGCATGCT TTCCCTGGAGCTTCTGGCAGCCGTGGCGGGGCTCAATATCCTCTTCAATCTGCCGGTCGCCGTGCGCCGCCTGCATGACA GCAATCTGAGCGGAAAATTCATCCTGATTCCCATTCTTATTTTCATCGTCACTTTCCTGCTGATTTTCCTGCTGCGCCTG GTCCCGGAGGACATGGCCCCCTATCTGGACTACCTGGGAATGGTGTCCAGCCTGATGGATCTGCTTTCCATCCTCTTCCT GTCCATGATGCTTCTTAAAAGCTCGCCAGGCCCCAATGAATACGGCGTGCTTCCGCAAAAAATAACCGTATCCTGA
Upstream 100 bases:
>100_bases TCTGAACCGGCTGCAGGAGGGAACTTTCCATGTCCTGGGCACAGACGCATTGAGCATTCCCCGGCATCAGGGAGTCTAAA CGGAAACCCCCTTTTCATCC
Downstream 100 bases:
>100_bases TTCCAGGATACGGTTGAAAAGCAATCAAAACCCTATCGGGTACAATCAATTTCCCGTGACGCAGACGGAGAACGTCAGTC CCCGAAGCATACGCCCAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MPESPASPASPAVSSVPPTSTQASSLLSPLSCWKKGFLHYADFRGCASRAEFWWFMALPLLALIPALAGYILTDWLHIPD TRLSIYGDALTILLWAVLFIPSISAAFRRLHDTGRSGLWLFSLFIPFGLGHLIFFYLTLGESKADGNKYSRRPEPQPADP PAGKLKEQPLTPFYLYWLISLRKLNTVAGRASRTEFWSFFLLSVLLFLPLGYSMIDVDSQPAGFYVSPSLQILLYAAHPQ DALILLAHSCFNPTFYFFYQSGELSMLSLELLAAVAGLNILFNLPVAVRRLHDSNLSGKFILIPILIFIVTFLLIFLLRL VPEDMAPYLDYLGMVSSLMDLLSILFLSMMLLKSSPGPNEYGVLPQKITVS
Sequences:
>Translated_371_residues MPESPASPASPAVSSVPPTSTQASSLLSPLSCWKKGFLHYADFRGCASRAEFWWFMALPLLALIPALAGYILTDWLHIPD TRLSIYGDALTILLWAVLFIPSISAAFRRLHDTGRSGLWLFSLFIPFGLGHLIFFYLTLGESKADGNKYSRRPEPQPADP PAGKLKEQPLTPFYLYWLISLRKLNTVAGRASRTEFWSFFLLSVLLFLPLGYSMIDVDSQPAGFYVSPSLQILLYAAHPQ DALILLAHSCFNPTFYFFYQSGELSMLSLELLAAVAGLNILFNLPVAVRRLHDSNLSGKFILIPILIFIVTFLLIFLLRL VPEDMAPYLDYLGMVSSLMDLLSILFLSMMLLKSSPGPNEYGVLPQKITVS >Mature_370_residues PESPASPASPAVSSVPPTSTQASSLLSPLSCWKKGFLHYADFRGCASRAEFWWFMALPLLALIPALAGYILTDWLHIPDT RLSIYGDALTILLWAVLFIPSISAAFRRLHDTGRSGLWLFSLFIPFGLGHLIFFYLTLGESKADGNKYSRRPEPQPADPP AGKLKEQPLTPFYLYWLISLRKLNTVAGRASRTEFWSFFLLSVLLFLPLGYSMIDVDSQPAGFYVSPSLQILLYAAHPQD ALILLAHSCFNPTFYFFYQSGELSMLSLELLAAVAGLNILFNLPVAVRRLHDSNLSGKFILIPILIFIVTFLLIFLLRLV PEDMAPYLDYLGMVSSLMDLLSILFLSMMLLKSSPGPNEYGVLPQKITVS
Specific function: Unknown
COG id: COG3152
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41353; Mature: 41222
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPESPASPASPAVSSVPPTSTQASSLLSPLSCWKKGFLHYADFRGCASRAEFWWFMALPL CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH LALIPALAGYILTDWLHIPDTRLSIYGDALTILLWAVLFIPSISAAFRRLHDTGRSGLWL HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH FSLFIPFGLGHLIFFYLTLGESKADGNKYSRRPEPQPADPPAGKLKEQPLTPFYLYWLIS HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH LRKLNTVAGRASRTEFWSFFLLSVLLFLPLGYSMIDVDSQPAGFYVSPSLQILLYAAHPQ HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEECCCEEEEEEECCCC DALILLAHSCFNPTFYFFYQSGELSMLSLELLAAVAGLNILFNLPVAVRRLHDSNLSGKF CHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCC ILIPILIFIVTFLLIFLLRLVPEDMAPYLDYLGMVSSLMDLLSILFLSMMLLKSSPGPNE HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC YGVLPQKITVS CCCCCCEEECC >Mature Secondary Structure PESPASPASPAVSSVPPTSTQASSLLSPLSCWKKGFLHYADFRGCASRAEFWWFMALPL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH LALIPALAGYILTDWLHIPDTRLSIYGDALTILLWAVLFIPSISAAFRRLHDTGRSGLWL HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH FSLFIPFGLGHLIFFYLTLGESKADGNKYSRRPEPQPADPPAGKLKEQPLTPFYLYWLIS HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH LRKLNTVAGRASRTEFWSFFLLSVLLFLPLGYSMIDVDSQPAGFYVSPSLQILLYAAHPQ HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEECCCEEEEEEECCCC DALILLAHSCFNPTFYFFYQSGELSMLSLELLAAVAGLNILFNLPVAVRRLHDSNLSGKF CHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCC ILIPILIFIVTFLLIFLLRLVPEDMAPYLDYLGMVSSLMDLLSILFLSMMLLKSSPGPNE HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC YGVLPQKITVS CCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA