Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735975
Identifier: 187735975
GI number: 187735975
Start: 1774251
End: 1775270
Strand: Reverse
Name: 187735975
Synonym: Amuc_1484
Alternate gene names: NA
Gene position: 1775270-1774251 (Counterclockwise)
Preceding gene: 187735976
Following gene: 187735974
Centisome position: 66.64
GC content: 54.02
Gene sequence:
>1020_bases ATGAAAACAATCATACATCCCCTCGCAGCCATACTCCTCGCCTGGAGTGCCGGCGCCTCCGAAACATGGAGTACCAGCCC TGCGGAAGCCATGCAGCAAGCCGCCGCACAGAATAAGGGAGTAATGCTGGAATTCACCGGTTCCGACTGGTGCGGAGCCT GCATCATGCAGAAAAAGCAGGCTCTTTCCCTTCCTGAAATCCAGACAGCCATTTCCCGTTCCTTTATTCCCGTGGAACTG GACTACCCACGTAAAAAGCAGCAGGACGCGCAGACAAAAACTTCTCTGGAAACCTATAAAAAATCCTACGGCATCACCGG ATTCCCCACGCTGGTGTTTGCGGATGCCCAGGGGCGGCCCGTCCACACCGTCGTAGGTTACGCCAATCCTGCCCAGGTCA TGCAGGATACAAAAAAAGCGGCGGAAGCACTCAACACGCAGCAGTCCCTGACAAACAAGCTGGCGGAAAAGCTCACTGAC CAGCAGCGGCGGGACACGCTGGTTCAATTGCTGAAAACGGTTCCCCAATCCAGCATCCGCACTTTCTATAAGCCGGCTCT GGCAGAACTGGAAAAACTGGACCCGCAGGACGCTTCCGGAATTCTCGCCAAACTGCACAGGGACGATCTGCTCCATGCCC AGAAATTGGAATGGGCCGATACGTTCCGGAAGAAAAACATCCACATTCTGGCGGATCAAAATCCTGATGAAGCGCTTTCC ATCATGGACAGCTACTTGAAAAAGAACGGGCTTCTTCCGGAAGTCAAACAAGCTGTTCTCATGCAAAAAGTGTACCTGCT CATGCAGCAAAACAGGGTCAATGAATTGGAACAGCCTCTCAAAGAAGGCGTTGCGCTCCTCCCAAAAAGTTTTGAAGGAA AAGCGTTCGGCAAACTTCTGGACAAGCTGCCTGAAATCAAGAAGGAACGGGGCCTCCTGAAGCCGGGGGAAGAGCCCCCC CTTCCCCCCGGCGCCATCCGGGCCACGAAGATGATCGTTCCCACGGCTCCCGCAAAATAA
Upstream 100 bases:
>100_bases CCTACCCATACCGGAGATTCCGGCAGCTCCTCTTCCGGAAACATGTGGGTTCCCCCCGCCCATTCTCCGCTTCCCCCCAT GCAATAATGACATTCCTGCC
Downstream 100 bases:
>100_bases TACACCCCTTTCTTTACTGCCGGGGTCATCCCTGCCCGGCAGGTGCACGCATGGACCTTTCCGCCGACCACATCCTCGTT GTCTTCCTGCTCACCACGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Thiol-Disulfide Isomerase Or Thioredoxin; Disulfide Bond Isomerase; Thioredoxin Family Protein; Thioredoxin Disulfide Isomerase; Thioredoxin/Thiol-Disulfide Isomerase
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MKTIIHPLAAILLAWSAGASETWSTSPAEAMQQAAAQNKGVMLEFTGSDWCGACIMQKKQALSLPEIQTAISRSFIPVEL DYPRKKQQDAQTKTSLETYKKSYGITGFPTLVFADAQGRPVHTVVGYANPAQVMQDTKKAAEALNTQQSLTNKLAEKLTD QQRRDTLVQLLKTVPQSSIRTFYKPALAELEKLDPQDASGILAKLHRDDLLHAQKLEWADTFRKKNIHILADQNPDEALS IMDSYLKKNGLLPEVKQAVLMQKVYLLMQQNRVNELEQPLKEGVALLPKSFEGKAFGKLLDKLPEIKKERGLLKPGEEPP LPPGAIRATKMIVPTAPAK
Sequences:
>Translated_339_residues MKTIIHPLAAILLAWSAGASETWSTSPAEAMQQAAAQNKGVMLEFTGSDWCGACIMQKKQALSLPEIQTAISRSFIPVEL DYPRKKQQDAQTKTSLETYKKSYGITGFPTLVFADAQGRPVHTVVGYANPAQVMQDTKKAAEALNTQQSLTNKLAEKLTD QQRRDTLVQLLKTVPQSSIRTFYKPALAELEKLDPQDASGILAKLHRDDLLHAQKLEWADTFRKKNIHILADQNPDEALS IMDSYLKKNGLLPEVKQAVLMQKVYLLMQQNRVNELEQPLKEGVALLPKSFEGKAFGKLLDKLPEIKKERGLLKPGEEPP LPPGAIRATKMIVPTAPAK >Mature_339_residues MKTIIHPLAAILLAWSAGASETWSTSPAEAMQQAAAQNKGVMLEFTGSDWCGACIMQKKQALSLPEIQTAISRSFIPVEL DYPRKKQQDAQTKTSLETYKKSYGITGFPTLVFADAQGRPVHTVVGYANPAQVMQDTKKAAEALNTQQSLTNKLAEKLTD QQRRDTLVQLLKTVPQSSIRTFYKPALAELEKLDPQDASGILAKLHRDDLLHAQKLEWADTFRKKNIHILADQNPDEALS IMDSYLKKNGLLPEVKQAVLMQKVYLLMQQNRVNELEQPLKEGVALLPKSFEGKAFGKLLDKLPEIKKERGLLKPGEEPP LPPGAIRATKMIVPTAPAK
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37573; Mature: 37573
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTIIHPLAAILLAWSAGASETWSTSPAEAMQQAAAQNKGVMLEFTGSDWCGACIMQKKQ CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHH ALSLPEIQTAISRSFIPVELDYPRKKQQDAQTKTSLETYKKSYGITGFPTLVFADAQGRP HCCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC VHTVVGYANPAQVMQDTKKAAEALNTQQSLTNKLAEKLTDQQRRDTLVQLLKTVPQSSIR EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH TFYKPALAELEKLDPQDASGILAKLHRDDLLHAQKLEWADTFRKKNIHILADQNPDEALS HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHH IMDSYLKKNGLLPEVKQAVLMQKVYLLMQQNRVNELEQPLKEGVALLPKSFEGKAFGKLL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH DKLPEIKKERGLLKPGEEPPLPPGAIRATKMIVPTAPAK HHHHHHHHHCCCCCCCCCCCCCCCHHHHHEEECCCCCCC >Mature Secondary Structure MKTIIHPLAAILLAWSAGASETWSTSPAEAMQQAAAQNKGVMLEFTGSDWCGACIMQKKQ CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHH ALSLPEIQTAISRSFIPVELDYPRKKQQDAQTKTSLETYKKSYGITGFPTLVFADAQGRP HCCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC VHTVVGYANPAQVMQDTKKAAEALNTQQSLTNKLAEKLTDQQRRDTLVQLLKTVPQSSIR EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH TFYKPALAELEKLDPQDASGILAKLHRDDLLHAQKLEWADTFRKKNIHILADQNPDEALS HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHH IMDSYLKKNGLLPEVKQAVLMQKVYLLMQQNRVNELEQPLKEGVALLPKSFEGKAFGKLL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH DKLPEIKKERGLLKPGEEPPLPPGAIRATKMIVPTAPAK HHHHHHHHHCCCCCCCCCCCCCCCHHHHHEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA