Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is intE [C]

Identifier: 187735871

GI number: 187735871

Start: 1642372

End: 1643622

Strand: Reverse

Name: intE [C]

Synonym: Amuc_1378

Alternate gene names: 187735871

Gene position: 1643622-1642372 (Counterclockwise)

Preceding gene: 187735872

Following gene: 187735861

Centisome position: 61.7

GC content: 51.88

Gene sequence:

>1251_bases
ATGGCCTCCATCTATAAAAAGCCGAACAGCCCTTACTGGTACGCACAATACCGCGTGAGAACCGCTACAGGCTGGAAACT
GGTCCGGCTGTCAACCAAAATCAAGCATACCCCCGCCACGGTAACAAGGGAAGTAAAAGAAGCCGCAGAGTCCATGGGGA
AGCAGCTGAACGTCCTGACCAGGGAACAGGCTATGACCAAGGCACAACGCCTGGCGGACGCCCTTGAATCAACGGCGCGG
GCAAACCTGCCGGCCTATCAATTACGCCGGGCCATTTCCGCATTGTCCACGGAATTGACCGGAGAATCTATGGAAATGCC
CTCTGTCAAATTATGGCTTGATGACCACATGCGGCGCATTACGCGCAATGGGCTTAAACCCGCATCCATAGCGAACTACA
AACAAGCCTTTGACAAATTTCGCGCCTCAATGGGAGAACGTATCAACCTGCCTCTGGATCGCATTACTCCTCTGATGCTG
GACGATTTCAAAAACCATCTTCTTTCCCGTGTCTCACCATCTACCGCCAATATTGCTCTTACGCTGGTTTCCGCGGCGTT
CCAGGCGGCAGTTGATTATAAAATTATTGAAACCAACCCCTTTACGGCGATTACCAAGCCTCACAAGGGGAAAGCCGTCA
AACGGCGGAAATTCGAATTGGAAGAGCTTGAAAAGGTAATGGCCGCATGCAATCCGGAATGGCGCTCCATGGTGAAAACG
TGCCTCTATACGGGCGGTCAAAGATTGGGAGACGTGGCAACGCTCCGGTGGTCCCAGGTTGACGAGAAACGAGGCGTTAT
CCGGATGACCACGCAGAAAAAGGGAAAGCCTCTGATGATTCCGATTTTTCCGGCGCTGAAAAAACACCTGCAGCAACGGA
AGAAAGAAGCTCCTGGGGACTTCCTGCATCCTGAATGCGCGAATATTTTTGAAAGCAAGGGATCCGGACGCCTGTCAAAT
ATCTTTAGCCACATCCTGTACCAGTGTGGCCTTATTGCCAAAGACCCTCTGGCTGCAGGCAAAAAATACAAAAAGCAGGA
AGGAAACGGCACAGAGACGCGGCGCCACGTCAATGAATTGTCCTTCCACAGCCTCCGCTATACGGCAACAACCATGTTAC
ATGACGCCGGTGTTCCCCCTGCTCTTGTGCAAGCCATTGTGGGGCACGATTCCCGGGAAGTCCATGAAGGATACATCGAC
TTTGGAGCCAAGGAGTTTACACAAGCCCTTGAAAAGCTTCCCAAATTGTAG

Upstream 100 bases:

>100_bases
CTCTAAACAAAGCTCTTACGAAATTTCAGAAAACACAAAAACATCTTGAAACATGGTGATACAACTTGCAAAAAGAGCAC
ACTATTGATACCACTAAATC

Downstream 100 bases:

>100_bases
CACTACCTTAAATAGTGATATCATGTTTTAAACCTCCCTGTAAGTCGTGGCGGCAGCGTCCCATTTCAGGTCAATGTAAC
CAATCTCCCCGAAGCGGTTC

Product: integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MASIYKKPNSPYWYAQYRVRTATGWKLVRLSTKIKHTPATVTREVKEAAESMGKQLNVLTREQAMTKAQRLADALESTAR
ANLPAYQLRRAISALSTELTGESMEMPSVKLWLDDHMRRITRNGLKPASIANYKQAFDKFRASMGERINLPLDRITPLML
DDFKNHLLSRVSPSTANIALTLVSAAFQAAVDYKIIETNPFTAITKPHKGKAVKRRKFELEELEKVMAACNPEWRSMVKT
CLYTGGQRLGDVATLRWSQVDEKRGVIRMTTQKKGKPLMIPIFPALKKHLQQRKKEAPGDFLHPECANIFESKGSGRLSN
IFSHILYQCGLIAKDPLAAGKKYKKQEGNGTETRRHVNELSFHSLRYTATTMLHDAGVPPALVQAIVGHDSREVHEGYID
FGAKEFTQALEKLPKL

Sequences:

>Translated_416_residues
MASIYKKPNSPYWYAQYRVRTATGWKLVRLSTKIKHTPATVTREVKEAAESMGKQLNVLTREQAMTKAQRLADALESTAR
ANLPAYQLRRAISALSTELTGESMEMPSVKLWLDDHMRRITRNGLKPASIANYKQAFDKFRASMGERINLPLDRITPLML
DDFKNHLLSRVSPSTANIALTLVSAAFQAAVDYKIIETNPFTAITKPHKGKAVKRRKFELEELEKVMAACNPEWRSMVKT
CLYTGGQRLGDVATLRWSQVDEKRGVIRMTTQKKGKPLMIPIFPALKKHLQQRKKEAPGDFLHPECANIFESKGSGRLSN
IFSHILYQCGLIAKDPLAAGKKYKKQEGNGTETRRHVNELSFHSLRYTATTMLHDAGVPPALVQAIVGHDSREVHEGYID
FGAKEFTQALEKLPKL
>Mature_415_residues
ASIYKKPNSPYWYAQYRVRTATGWKLVRLSTKIKHTPATVTREVKEAAESMGKQLNVLTREQAMTKAQRLADALESTARA
NLPAYQLRRAISALSTELTGESMEMPSVKLWLDDHMRRITRNGLKPASIANYKQAFDKFRASMGERINLPLDRITPLMLD
DFKNHLLSRVSPSTANIALTLVSAAFQAAVDYKIIETNPFTAITKPHKGKAVKRRKFELEELEKVMAACNPEWRSMVKTC
LYTGGQRLGDVATLRWSQVDEKRGVIRMTTQKKGKPLMIPIFPALKKHLQQRKKEAPGDFLHPECANIFESKGSGRLSNI
FSHILYQCGLIAKDPLAAGKKYKKQEGNGTETRRHVNELSFHSLRYTATTMLHDAGVPPALVQAIVGHDSREVHEGYIDF
GAKEFTQALEKLPKL

Specific function: Integrase From The Cryptic Lambdoic Prophage E14. Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46903; Mature: 46772

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASIYKKPNSPYWYAQYRVRTATGWKLVRLSTKIKHTPATVTREVKEAAESMGKQLNVLT
CCCCCCCCCCCEEEEEEEEEECCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
REQAMTKAQRLADALESTARANLPAYQLRRAISALSTELTGESMEMPSVKLWLDDHMRRI
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHH
TRNGLKPASIANYKQAFDKFRASMGERINLPLDRITPLMLDDFKNHLLSRVSPSTANIAL
HHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
TLVSAAFQAAVDYKIIETNPFTAITKPHKGKAVKRRKFELEELEKVMAACNPEWRSMVKT
HHHHHHHHHHHCEEEEECCCCEEECCCCCCCHHHHHHCCHHHHHHHHHHCCHHHHHHHHH
CLYTGGQRLGDVATLRWSQVDEKRGVIRMTTQKKGKPLMIPIFPALKKHLQQRKKEAPGD
HHHHCCHHHCHHHHHHHHHHHHHCCEEEEECCCCCCEEEEECHHHHHHHHHHHHHCCCCC
FLHPECANIFESKGSGRLSNIFSHILYQCGLIAKDPLAAGKKYKKQEGNGTETRRHVNEL
CCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHCHHHHHCCCCCHHHHHHHHHH
SFHSLRYTATTMLHDAGVPPALVQAIVGHDSREVHEGYIDFGAKEFTQALEKLPKL
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
ASIYKKPNSPYWYAQYRVRTATGWKLVRLSTKIKHTPATVTREVKEAAESMGKQLNVLT
CCCCCCCCCCEEEEEEEEEECCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
REQAMTKAQRLADALESTARANLPAYQLRRAISALSTELTGESMEMPSVKLWLDDHMRRI
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHH
TRNGLKPASIANYKQAFDKFRASMGERINLPLDRITPLMLDDFKNHLLSRVSPSTANIAL
HHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
TLVSAAFQAAVDYKIIETNPFTAITKPHKGKAVKRRKFELEELEKVMAACNPEWRSMVKT
HHHHHHHHHHHCEEEEECCCCEEECCCCCCCHHHHHHCCHHHHHHHHHHCCHHHHHHHHH
CLYTGGQRLGDVATLRWSQVDEKRGVIRMTTQKKGKPLMIPIFPALKKHLQQRKKEAPGD
HHHHCCHHHCHHHHHHHHHHHHHCCEEEEECCCCCCEEEEECHHHHHHHHHHHHHCCCCC
FLHPECANIFESKGSGRLSNIFSHILYQCGLIAKDPLAAGKKYKKQEGNGTETRRHVNEL
CCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHCHHHHHCCCCCHHHHHHHHHH
SFHSLRYTATTMLHDAGVPPALVQAIVGHDSREVHEGYIDFGAKEFTQALEKLPKL
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA