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The map label for this gene is ybhR [H]

Identifier: 187735872

GI number: 187735872

Start: 1644002

End: 1645114

Strand: Reverse

Name: ybhR [H]

Synonym: Amuc_1379

Alternate gene names: 187735872

Gene position: 1645114-1644002 (Counterclockwise)

Preceding gene: 187735873

Following gene: 187735871

Centisome position: 61.75

GC content: 61.37

Gene sequence:

>1113_bases
ATGGACTTCCTGATCAGAATAGCCTCCCTCGTCAGAAAAGAACTGCTGGCCGTGCTCAGGGACAAAAAAAGCCGGCTGGC
CCTCATCATCCCTCCCATCATCCAGATAGCCATCTTCGGCTATGCCGCCACCATGAACGTCACCCGCGTGCCATACGCCG
TGCTGGACAAAGACGGCGGAGAAGCGGCCGCCCAGTACATCGCGGACCTGGAAGGCACGGGAATCTTCCGGCGCCAGGCC
GCCGCGGCCACGGAAAAAGACATTGACCGCATGATAGACAACCGGGAAATCGTCGTGGGGCTCACCATTCCGCCGGATTT
CTCCCGCAACATTCAGACGGGGAGGCCCGCATCTCTCCAGCTCATTGCGGACGGGCGCAACACGAATACGGCGGCCATCG
CCCTCAGCTACGGCCAGCAAATCGCTGCCGCCTACGGGGCGGAACTGCTCTCCAAAAACGGCGGCTCCTCCCCGGTGGAA
ACGGAATCCCGCGCCTGGTTCAACCCCAACCTCATCACACGCTGGTTCATCGTTCCCGGCCTCATCGCCGTGCTCGTGCT
CATCAACTCCATCCTCTCCGGCGCGCTCTCCATCGCCCGCGAGCGGGAGGAAGGCACCTTCGACCAGCTTCTCGTCGCCC
CATACACCCCGGGGGAAATCCTGCTCGGCAAGGGAACAGCCTCCGTCGTCACCGGAATCATGCAGGCCGTCTTCGTGGTG
CTGGTTGCCATGTTCTGGTTCCGCATCCCCTTCCAGGGCTCCGTCTGGCTGCTCTCCGCCGCCCTGCTGCTCTTCATCGT
CACGGCGGCGGCCATCGGGCTGTGCATTTCCTCCTTCGCCCAATCCCTTCAGCAGGCTATTGTGGGAACTTTCCTGCTGC
TGGTGCCCATGGTCATGCTCTCCGGCTTTGCCACGCCCATCTCCAGCATGCCGGAAATCTTCCAGGACCTCACGCTGCTC
AACCCCATGAGATACGGCCTGGAACTCATCCAGCGCATCTTTCTGGAAGGAGCCGGATTCCTGGATCTCTGGCCGCTTTT
CGCGGCCATCATGGCCGTTACCGTGGCGGCCGTCCTGGCAGCCATCTTCTCTTTTCATCATAAAATATCCTGA

Upstream 100 bases:

>100_bases
CCTTCCGTCATCATTCCCTGCTGCATCACGCTGGGCGTCTTTGCCGTGGTGCTCATGGGAATCGCCAGGATGAAAGCACC
CAAATCCCTCGAATAGCGCC

Downstream 100 bases:

>100_bases
TGCCCCCTTCCTTCTTCCCGGAATATCCGGAAACCTCCCTGCCCTTAACATCCCCGTTTCACATTTTCATCATGCCAATC
CCGTCACCGGCATAAAAATA

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MDFLIRIASLVRKELLAVLRDKKSRLALIIPPIIQIAIFGYAATMNVTRVPYAVLDKDGGEAAAQYIADLEGTGIFRRQA
AAATEKDIDRMIDNREIVVGLTIPPDFSRNIQTGRPASLQLIADGRNTNTAAIALSYGQQIAAAYGAELLSKNGGSSPVE
TESRAWFNPNLITRWFIVPGLIAVLVLINSILSGALSIAREREEGTFDQLLVAPYTPGEILLGKGTASVVTGIMQAVFVV
LVAMFWFRIPFQGSVWLLSAALLLFIVTAAAIGLCISSFAQSLQQAIVGTFLLLVPMVMLSGFATPISSMPEIFQDLTLL
NPMRYGLELIQRIFLEGAGFLDLWPLFAAIMAVTVAAVLAAIFSFHHKIS

Sequences:

>Translated_370_residues
MDFLIRIASLVRKELLAVLRDKKSRLALIIPPIIQIAIFGYAATMNVTRVPYAVLDKDGGEAAAQYIADLEGTGIFRRQA
AAATEKDIDRMIDNREIVVGLTIPPDFSRNIQTGRPASLQLIADGRNTNTAAIALSYGQQIAAAYGAELLSKNGGSSPVE
TESRAWFNPNLITRWFIVPGLIAVLVLINSILSGALSIAREREEGTFDQLLVAPYTPGEILLGKGTASVVTGIMQAVFVV
LVAMFWFRIPFQGSVWLLSAALLLFIVTAAAIGLCISSFAQSLQQAIVGTFLLLVPMVMLSGFATPISSMPEIFQDLTLL
NPMRYGLELIQRIFLEGAGFLDLWPLFAAIMAVTVAAVLAAIFSFHHKIS
>Mature_370_residues
MDFLIRIASLVRKELLAVLRDKKSRLALIIPPIIQIAIFGYAATMNVTRVPYAVLDKDGGEAAAQYIADLEGTGIFRRQA
AAATEKDIDRMIDNREIVVGLTIPPDFSRNIQTGRPASLQLIADGRNTNTAAIALSYGQQIAAAYGAELLSKNGGSSPVE
TESRAWFNPNLITRWFIVPGLIAVLVLINSILSGALSIAREREEGTFDQLLVAPYTPGEILLGKGTASVVTGIMQAVFVV
LVAMFWFRIPFQGSVWLLSAALLLFIVTAAAIGLCISSFAQSLQQAIVGTFLLLVPMVMLSGFATPISSMPEIFQDLTLL
NPMRYGLELIQRIFLEGAGFLDLWPLFAAIMAVTVAAVLAAIFSFHHKIS

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=364, Percent_Identity=35.989010989011, Blast_Score=261, Evalue=8e-71,
Organism=Escherichia coli, GI48994943, Length=356, Percent_Identity=30.6179775280899, Blast_Score=150, Evalue=2e-37,
Organism=Escherichia coli, GI1787011, Length=340, Percent_Identity=29.1176470588235, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI226510979, Length=375, Percent_Identity=29.6, Blast_Score=132, Evalue=3e-32,
Organism=Drosophila melanogaster, GI85725260, Length=379, Percent_Identity=25.065963060686, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI85725262, Length=379, Percent_Identity=25.065963060686, Blast_Score=83, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 40027; Mature: 40027

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFLIRIASLVRKELLAVLRDKKSRLALIIPPIIQIAIFGYAATMNVTRVPYAVLDKDGG
CHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCHHHCCHHEEECCCH
EAAAQYIADLEGTGIFRRQAAAATEKDIDRMIDNREIVVGLTIPPDFSRNIQTGRPASLQ
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCEEE
LIADGRNTNTAAIALSYGQQIAAAYGAELLSKNGGSSPVETESRAWFNPNLITRWFIVPG
EEECCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
LIAVLVLINSILSGALSIAREREEGTFDQLLVAPYTPGEILLGKGTASVVTGIMQAVFVV
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCEEECCCHHHHHHHHHHHHHHH
LVAMFWFRIPFQGSVWLLSAALLLFIVTAAAIGLCISSFAQSLQQAIVGTFLLLVPMVML
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGFATPISSMPEIFQDLTLLNPMRYGLELIQRIFLEGAGFLDLWPLFAAIMAVTVAAVLA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
AIFSFHHKIS
HHHHHHHCCC
>Mature Secondary Structure
MDFLIRIASLVRKELLAVLRDKKSRLALIIPPIIQIAIFGYAATMNVTRVPYAVLDKDGG
CHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCHHHCCHHEEECCCH
EAAAQYIADLEGTGIFRRQAAAATEKDIDRMIDNREIVVGLTIPPDFSRNIQTGRPASLQ
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCEEE
LIADGRNTNTAAIALSYGQQIAAAYGAELLSKNGGSSPVETESRAWFNPNLITRWFIVPG
EEECCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
LIAVLVLINSILSGALSIAREREEGTFDQLLVAPYTPGEILLGKGTASVVTGIMQAVFVV
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCEEECCCHHHHHHHHHHHHHHH
LVAMFWFRIPFQGSVWLLSAALLLFIVTAAAIGLCISSFAQSLQQAIVGTFLLLVPMVML
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGFATPISSMPEIFQDLTLLNPMRYGLELIQRIFLEGAGFLDLWPLFAAIMAVTVAAVLA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
AIFSFHHKIS
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]