Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187735861

Identifier: 187735861

GI number: 187735861

Start: 1636881

End: 1637228

Strand: Reverse

Name: 187735861

Synonym: Amuc_1368

Alternate gene names: NA

Gene position: 1637228-1636881 (Counterclockwise)

Preceding gene: 187735871

Following gene: 187735858

Centisome position: 61.46

GC content: 44.54

Gene sequence:

>348_bases
ATGGAGAATGAAAAGGAACTCATCAAATCTTGGCTAAAGAAAAATAAAAAAAGCCGTGAATGGTTGGCTCAGAAATGCTT
TGTTAAAAAGGCGTCCGTGGATGATTGGTTTCGATCTAAAGGCATAATTCCTCCGGCCAAGCTTGAGCTAATCCGGAAAG
AAATAAATAGGCAAGGAGAAGAAGCGGCCAAGACAGCATCCTCTGTCCCTATATTGAATGGTGTTGCAGCGGTAGCGGTT
CCTCTTTCGGAAGATGATTTAAAACTCATTTCCAAGGCCGCACAAATCAGCGGGCAAACTATTGAGGAGTTCATCCGTAG
TGCTGCGCTGGAAGACGCGGGAGAATAA

Upstream 100 bases:

>100_bases
TTTCCATATTGAGGATTTTTCATCACTAGTCAATCTATTTTTGCGGAAAGACATCAAATATTTTACTTGCATAATGAGGA
TTTTTCCTCATACTCTCCTC

Downstream 100 bases:

>100_bases
TCCTCATTGAGGATTCTGTGGTGATGTAGGGTTGTTGTCTTCATAACTTGGATTTAGATTGAGGCAGCAGAACTCAGGTC
AAGTCCCCGTTTCCAAAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MENEKELIKSWLKKNKKSREWLAQKCFVKKASVDDWFRSKGIIPPAKLELIRKEINRQGEEAAKTASSVPILNGVAAVAV
PLSEDDLKLISKAAQISGQTIEEFIRSAALEDAGE

Sequences:

>Translated_115_residues
MENEKELIKSWLKKNKKSREWLAQKCFVKKASVDDWFRSKGIIPPAKLELIRKEINRQGEEAAKTASSVPILNGVAAVAV
PLSEDDLKLISKAAQISGQTIEEFIRSAALEDAGE
>Mature_115_residues
MENEKELIKSWLKKNKKSREWLAQKCFVKKASVDDWFRSKGIIPPAKLELIRKEINRQGEEAAKTASSVPILNGVAAVAV
PLSEDDLKLISKAAQISGQTIEEFIRSAALEDAGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12779; Mature: 12779

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENEKELIKSWLKKNKKSREWLAQKCFVKKASVDDWFRSKGIIPPAKLELIRKEINRQGE
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHCCCHH
EAAKTASSVPILNGVAAVAVPLSEDDLKLISKAAQISGQTIEEFIRSAALEDAGE
HHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MENEKELIKSWLKKNKKSREWLAQKCFVKKASVDDWFRSKGIIPPAKLELIRKEINRQGE
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHCCCHH
EAAKTASSVPILNGVAAVAVPLSEDDLKLISKAAQISGQTIEEFIRSAALEDAGE
HHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA