Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735861
Identifier: 187735861
GI number: 187735861
Start: 1636881
End: 1637228
Strand: Reverse
Name: 187735861
Synonym: Amuc_1368
Alternate gene names: NA
Gene position: 1637228-1636881 (Counterclockwise)
Preceding gene: 187735871
Following gene: 187735858
Centisome position: 61.46
GC content: 44.54
Gene sequence:
>348_bases ATGGAGAATGAAAAGGAACTCATCAAATCTTGGCTAAAGAAAAATAAAAAAAGCCGTGAATGGTTGGCTCAGAAATGCTT TGTTAAAAAGGCGTCCGTGGATGATTGGTTTCGATCTAAAGGCATAATTCCTCCGGCCAAGCTTGAGCTAATCCGGAAAG AAATAAATAGGCAAGGAGAAGAAGCGGCCAAGACAGCATCCTCTGTCCCTATATTGAATGGTGTTGCAGCGGTAGCGGTT CCTCTTTCGGAAGATGATTTAAAACTCATTTCCAAGGCCGCACAAATCAGCGGGCAAACTATTGAGGAGTTCATCCGTAG TGCTGCGCTGGAAGACGCGGGAGAATAA
Upstream 100 bases:
>100_bases TTTCCATATTGAGGATTTTTCATCACTAGTCAATCTATTTTTGCGGAAAGACATCAAATATTTTACTTGCATAATGAGGA TTTTTCCTCATACTCTCCTC
Downstream 100 bases:
>100_bases TCCTCATTGAGGATTCTGTGGTGATGTAGGGTTGTTGTCTTCATAACTTGGATTTAGATTGAGGCAGCAGAACTCAGGTC AAGTCCCCGTTTCCAAAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MENEKELIKSWLKKNKKSREWLAQKCFVKKASVDDWFRSKGIIPPAKLELIRKEINRQGEEAAKTASSVPILNGVAAVAV PLSEDDLKLISKAAQISGQTIEEFIRSAALEDAGE
Sequences:
>Translated_115_residues MENEKELIKSWLKKNKKSREWLAQKCFVKKASVDDWFRSKGIIPPAKLELIRKEINRQGEEAAKTASSVPILNGVAAVAV PLSEDDLKLISKAAQISGQTIEEFIRSAALEDAGE >Mature_115_residues MENEKELIKSWLKKNKKSREWLAQKCFVKKASVDDWFRSKGIIPPAKLELIRKEINRQGEEAAKTASSVPILNGVAAVAV PLSEDDLKLISKAAQISGQTIEEFIRSAALEDAGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12779; Mature: 12779
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENEKELIKSWLKKNKKSREWLAQKCFVKKASVDDWFRSKGIIPPAKLELIRKEINRQGE CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHCCCHH EAAKTASSVPILNGVAAVAVPLSEDDLKLISKAAQISGQTIEEFIRSAALEDAGE HHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MENEKELIKSWLKKNKKSREWLAQKCFVKKASVDDWFRSKGIIPPAKLELIRKEINRQGE CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHCCCHH EAAKTASSVPILNGVAAVAVPLSEDDLKLISKAAQISGQTIEEFIRSAALEDAGE HHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA