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The map label for this gene is recR [H]

Identifier: 187735818

GI number: 187735818

Start: 1603615

End: 1604223

Strand: Reverse

Name: recR [H]

Synonym: Amuc_1325

Alternate gene names: 187735818

Gene position: 1604223-1603615 (Counterclockwise)

Preceding gene: 187735819

Following gene: 187735814

Centisome position: 60.22

GC content: 63.38

Gene sequence:

>609_bases
ATGAATAATCTGGACTATCCCATCCCCGTGCTTGAACTGGTAACCGCCCTGAAACAGCTTCCGGGCATCGGCACCCGCGG
CGCGGAACGCATGGCCCTGTGGATGCTCCAGGGGCACATGGGAGAAGCGGAGGCGATTGCCCGCACCATCGGCCAGGCGG
CGGAACACGTTACGCCCTGCCCCGTCTGCGGCTTCTTCAGCACGGAAGGGGAGCCCTGCGCCGCCTGCCGGGATGAAGAA
CGGGACAGCCGCCTCATCTGCGTGGTGGAACAGGCCACGGACGTCATCCCCATTGAACGCAGCAGCGCCTACCGCGGATT
GTACCACTGCCTGGGCGGCAAGCTTTCCCCTCTGGATGATGTGGAGCCGGAAGACCTCAACATTCAATCCCTGGTGGAAC
GCGTCTCCCGGCAGCCTGATTGCGAAGTCATTCTGGCAACAGGCTCTGACGTGGAAGGGGAGGCAACGGCCACCTACCTC
CACCATCTGCTCAAAGAAATGGATTGCAGGATATCCCGCCCTGCCCAGGGGCTGCCTGCCGGCTCCGGCCTCAGCCACGC
GGACACGCTGACGCTGATGAAGGCTCTGGAAGGACGCACCCGGCTGTAA

Upstream 100 bases:

>100_bases
GCCGTCCCATGCCTGCTTTCCGCAGGGAGCGCGGGCGCGCTCGCCATCCTCTGGCCCCAAACGCCCCCTGTCCGGCGTCA
TTCCGAACCTCCTTCCGCTC

Downstream 100 bases:

>100_bases
AGGAAAGCCCTTTCCGCATCCATCCCGGCATGGGGACGGTTCCGTCTTTACAGCGGTTTTCCTGCACCGGGCAAAACGCC
TCTTTCCCCCCATAATGAAG

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MNNLDYPIPVLELVTALKQLPGIGTRGAERMALWMLQGHMGEAEAIARTIGQAAEHVTPCPVCGFFSTEGEPCAACRDEE
RDSRLICVVEQATDVIPIERSSAYRGLYHCLGGKLSPLDDVEPEDLNIQSLVERVSRQPDCEVILATGSDVEGEATATYL
HHLLKEMDCRISRPAQGLPAGSGLSHADTLTLMKALEGRTRL

Sequences:

>Translated_202_residues
MNNLDYPIPVLELVTALKQLPGIGTRGAERMALWMLQGHMGEAEAIARTIGQAAEHVTPCPVCGFFSTEGEPCAACRDEE
RDSRLICVVEQATDVIPIERSSAYRGLYHCLGGKLSPLDDVEPEDLNIQSLVERVSRQPDCEVILATGSDVEGEATATYL
HHLLKEMDCRISRPAQGLPAGSGLSHADTLTLMKALEGRTRL
>Mature_202_residues
MNNLDYPIPVLELVTALKQLPGIGTRGAERMALWMLQGHMGEAEAIARTIGQAAEHVTPCPVCGFFSTEGEPCAACRDEE
RDSRLICVVEQATDVIPIERSSAYRGLYHCLGGKLSPLDDVEPEDLNIQSLVERVSRQPDCEVILATGSDVEGEATATYL
HHLLKEMDCRISRPAQGLPAGSGLSHADTLTLMKALEGRTRL

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=196, Percent_Identity=38.7755102040816, Blast_Score=127, Evalue=5e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967 [H]

Pfam domain/function: PF02132 RecR; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 21938; Mature: 21938

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNLDYPIPVLELVTALKQLPGIGTRGAERMALWMLQGHMGEAEAIARTIGQAAEHVTPC
CCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
PVCGFFSTEGEPCAACRDEERDSRLICVVEQATDVIPIERSSAYRGLYHCLGGKLSPLDD
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEECCCCCHHHHHHHHHHCCCCCCCCC
VEPEDLNIQSLVERVSRQPDCEVILATGSDVEGEATATYLHHLLKEMDCRISRPAQGLPA
CCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
GSGLSHADTLTLMKALEGRTRL
CCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNNLDYPIPVLELVTALKQLPGIGTRGAERMALWMLQGHMGEAEAIARTIGQAAEHVTPC
CCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
PVCGFFSTEGEPCAACRDEERDSRLICVVEQATDVIPIERSSAYRGLYHCLGGKLSPLDD
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEECCCCCHHHHHHHHHHCCCCCCCCC
VEPEDLNIQSLVERVSRQPDCEVILATGSDVEGEATATYLHHLLKEMDCRISRPAQGLPA
CCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
GSGLSHADTLTLMKALEGRTRL
CCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA