Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735819
Identifier: 187735819
GI number: 187735819
Start: 1604216
End: 1604665
Strand: Reverse
Name: 187735819
Synonym: Amuc_1326
Alternate gene names: NA
Gene position: 1604665-1604216 (Counterclockwise)
Preceding gene: 187735820
Following gene: 187735818
Centisome position: 60.23
GC content: 64.22
Gene sequence:
>450_bases ATGCCCGCCAAAACGCACCAGGACATTCTGCTCATGCGCTGGGCCCTGTTCTCCGTAGCCGGGCTTATCCTGCTCGTGGC GCTCTATTACCTGGGCCTTACTCCCGTCTGGGGCCGGGAGCTGAAGGAAGCCATGGCCTCCGCCCCGTTTCTGCTTCCCC CGGACGCCCCCGCCCTTTCTCCCGGCACGGGATTCCTGCTGTGCATGGCGTTGACGCTGGCCCTCGTTTACGATTTGCTG CTCATCCGCGGCACGCTCCGCAAAACGGCCGTTCTGGCCGCTTTCCTCCTTCTTCTGGCCAGCTTTACCCCGGTGCTGGG GCTGTGGGGCCTTTTCTTCAATGCCGTCCCATGCCTGCTTTCCGCAGGGAGCGCGGGCGCGCTCGCCATCCTCTGGCCCC AAACGCCCCCTGTCCGGCGTCATTCCGAACCTCCTTCCGCTCATGAATAA
Upstream 100 bases:
>100_bases ACGATTCGCCTGACCCTTTCAGGCCTCTCCTTTCCGGCGGAAGCGCTGATGTTTGCGGCCACCGCAGCCATCGCGCTTCC GCTTTTTTCATTTAAAAGCC
Downstream 100 bases:
>100_bases TCTGGACTATCCCATCCCCGTGCTTGAACTGGTAACCGCCCTGAAACAGCTTCCGGGCATCGGCACCCGCGGCGCGGAAC GCATGGCCCTGTGGATGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MPAKTHQDILLMRWALFSVAGLILLVALYYLGLTPVWGRELKEAMASAPFLLPPDAPALSPGTGFLLCMALTLALVYDLL LIRGTLRKTAVLAAFLLLLASFTPVLGLWGLFFNAVPCLLSAGSAGALAILWPQTPPVRRHSEPPSAHE
Sequences:
>Translated_149_residues MPAKTHQDILLMRWALFSVAGLILLVALYYLGLTPVWGRELKEAMASAPFLLPPDAPALSPGTGFLLCMALTLALVYDLL LIRGTLRKTAVLAAFLLLLASFTPVLGLWGLFFNAVPCLLSAGSAGALAILWPQTPPVRRHSEPPSAHE >Mature_148_residues PAKTHQDILLMRWALFSVAGLILLVALYYLGLTPVWGRELKEAMASAPFLLPPDAPALSPGTGFLLCMALTLALVYDLLL IRGTLRKTAVLAAFLLLLASFTPVLGLWGLFFNAVPCLLSAGSAGALAILWPQTPPVRRHSEPPSAHE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16000; Mature: 15869
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAKTHQDILLMRWALFSVAGLILLVALYYLGLTPVWGRELKEAMASAPFLLPPDAPALS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCC PGTGFLLCMALTLALVYDLLLIRGTLRKTAVLAAFLLLLASFTPVLGLWGLFFNAVPCLL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAGSAGALAILWPQTPPVRRHSEPPSAHE CCCCCCCEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure PAKTHQDILLMRWALFSVAGLILLVALYYLGLTPVWGRELKEAMASAPFLLPPDAPALS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCC PGTGFLLCMALTLALVYDLLLIRGTLRKTAVLAAFLLLLASFTPVLGLWGLFFNAVPCLL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAGSAGALAILWPQTPPVRRHSEPPSAHE CCCCCCCEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA