Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is 187735804
Identifier: 187735804
GI number: 187735804
Start: 1589223
End: 1589465
Strand: Reverse
Name: 187735804
Synonym: Amuc_1311
Alternate gene names: NA
Gene position: 1589465-1589223 (Counterclockwise)
Preceding gene: 187735807
Following gene: 187735803
Centisome position: 59.66
GC content: 58.02
Gene sequence:
>243_bases ATGAAAAAAATCCTCGCTGTAGCAGCCTTTGCTTTCGCCTTCAGTGTCAACGGTTACGCTCAGGAAGCCGCCGCTCCGGC GGAGTCCCCCGCCCCCGCTGCCCAGAAGTGCTGCAAGAAAGACAAAAAGTGCCCCAGGAAATGCGCCAAGGAAGGCAAAT GCCCAGAAAAATGCGGCCAGCCTTGCAGCAAAGGGGAAAAGCCCTGCGACTGCCCCAAAAAGGGAGAAGCCCCCAAGGCC TGA
Upstream 100 bases:
>100_bases TTTTTTGAACAAATATCACTCCCTGCCGCTCTATCTGTCGTAGAACGGCAGCTCTTCTGCCGCTGCATTACCAACACCAC ACAACCTCACATATCATTAT
Downstream 100 bases:
>100_bases CCCAACGGACCGTTAAAATAAATAAGAACCCTTGCCGGAACCTTCCGGCAAGGGTTTTCTCCGCCGGAAGAGGGCAGCCG CGCCCCTTCCGTTGACTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 80
Protein sequence:
>80_residues MKKILAVAAFAFAFSVNGYAQEAAAPAESPAPAAQKCCKKDKKCPRKCAKEGKCPEKCGQPCSKGEKPCDCPKKGEAPKA
Sequences:
>Translated_80_residues MKKILAVAAFAFAFSVNGYAQEAAAPAESPAPAAQKCCKKDKKCPRKCAKEGKCPEKCGQPCSKGEKPCDCPKKGEAPKA >Mature_80_residues MKKILAVAAFAFAFSVNGYAQEAAAPAESPAPAAQKCCKKDKKCPRKCAKEGKCPEKCGQPCSKGEKPCDCPKKGEAPKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8375; Mature: 8375
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
11.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 12.5 %Cys+Met (Translated Protein) 11.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 12.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILAVAAFAFAFSVNGYAQEAAAPAESPAPAAQKCCKKDKKCPRKCAKEGKCPEKCGQ CHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCC PCSKGEKPCDCPKKGEAPKA CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKILAVAAFAFAFSVNGYAQEAAAPAESPAPAAQKCCKKDKKCPRKCAKEGKCPEKCGQ CHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCC PCSKGEKPCDCPKKGEAPKA CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA