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The map label for this gene is ycfJ [C]

Identifier: 187735803

GI number: 187735803

Start: 1588598

End: 1589077

Strand: Reverse

Name: ycfJ [C]

Synonym: Amuc_1310

Alternate gene names: 187735803

Gene position: 1589077-1588598 (Counterclockwise)

Preceding gene: 187735804

Following gene: 187735802

Centisome position: 59.65

GC content: 61.46

Gene sequence:

>480_bases
ATGAAAACAGCTTCCATTCTTACCATCGGCTGTGCAGCCATGGCGCTGTCCATTACTTCCTGCACCAACTTCGGTTCCCC
GAACACCTATAACCTGAACGAAATCGGCGGAGCCCAGGAAACCTATACCGGCACGGTCACCAGCGTGGAAAACGTCAAGA
TCCAGGCCAATAACGCCAACACCGGCACCGGAATCGGCGCCGTGGCGGGCGGGTTGACCGGCGCCATGTTCGGGGGCGGC
AACGCCAAATTCGCGACGGCGGCGGGCGGCGCCATTCTGGGCGGCATTGCCGGCAACCAGATTGACAAGGCCGTCAACAA
CACGACCGGGGAACGCATCACCGTGCGTCTGGACCAGAAGAGGAACGGCACCCGCAACTACACGGTCGTCCAGGTCGCCA
GCAGGAACAACCCGATTCAGGTCGGGCAGCGCGTGCGCGTGATCATCGGCAACAACGGTTCCCGCGTGCTGGCCTATTAA

Upstream 100 bases:

>100_bases
CGGCAAGGGTTTTCTCCGCCGGAAGAGGGCAGCCGCGCCCCTTCCGTTGACTGCGAAATTACTTGATCTTAACCTTCAAC
CCATTTTATAAATCGTCATC

Downstream 100 bases:

>100_bases
TTGGACATCCACTACTGACCAAGCTATATACCGGCATGATCTTCGGCACCTTACCCGGCGGCGCACCTGTAGAATTGTTT
GAACTGTCTTCCGACAAGCT

Product: 17 kDa surface antigen

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MKTASILTIGCAAMALSITSCTNFGSPNTYNLNEIGGAQETYTGTVTSVENVKIQANNANTGTGIGAVAGGLTGAMFGGG
NAKFATAAGGAILGGIAGNQIDKAVNNTTGERITVRLDQKRNGTRNYTVVQVASRNNPIQVGQRVRVIIGNNGSRVLAY

Sequences:

>Translated_159_residues
MKTASILTIGCAAMALSITSCTNFGSPNTYNLNEIGGAQETYTGTVTSVENVKIQANNANTGTGIGAVAGGLTGAMFGGG
NAKFATAAGGAILGGIAGNQIDKAVNNTTGERITVRLDQKRNGTRNYTVVQVASRNNPIQVGQRVRVIIGNNGSRVLAY
>Mature_159_residues
MKTASILTIGCAAMALSITSCTNFGSPNTYNLNEIGGAQETYTGTVTSVENVKIQANNANTGTGIGAVAGGLTGAMFGGG
NAKFATAAGGAILGGIAGNQIDKAVNNTTGERITVRLDQKRNGTRNYTVVQVASRNNPIQVGQRVRVIIGNNGSRVLAY

Specific function: Unknown

COG id: COG3133

COG function: function code M; Outer membrane lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16195; Mature: 16195

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTASILTIGCAAMALSITSCTNFGSPNTYNLNEIGGAQETYTGTVTSVENVKIQANNAN
CCCCEEEEEEHHHHHEEHHHHCCCCCCCCCCHHHCCCCCCCEEEEEEEEEEEEEEECCCC
TGTGIGAVAGGLTGAMFGGGNAKFATAAGGAILGGIAGNQIDKAVNNTTGERITVRLDQK
CCCCHHHHHCCCEEEEECCCCCEEEEECCCEEEECCCCCHHHHHHCCCCCCEEEEEEECC
RNGTRNYTVVQVASRNNPIQVGQRVRVIIGNNGSRVLAY
CCCCCCEEEEEEECCCCCEECCCEEEEEECCCCCEEEEC
>Mature Secondary Structure
MKTASILTIGCAAMALSITSCTNFGSPNTYNLNEIGGAQETYTGTVTSVENVKIQANNAN
CCCCEEEEEEHHHHHEEHHHHCCCCCCCCCCHHHCCCCCCCEEEEEEEEEEEEEEECCCC
TGTGIGAVAGGLTGAMFGGGNAKFATAAGGAILGGIAGNQIDKAVNNTTGERITVRLDQK
CCCCHHHHHCCCEEEEECCCCCEEEEECCCEEEECCCCCHHHHHHCCCCCCEEEEEEECC
RNGTRNYTVVQVASRNNPIQVGQRVRVIIGNNGSRVLAY
CCCCCCEEEEEEECCCCCEECCCEEEEEECCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA