Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187735781

Identifier: 187735781

GI number: 187735781

Start: 1560065

End: 1560697

Strand: Direct

Name: 187735781

Synonym: Amuc_1287

Alternate gene names: NA

Gene position: 1560065-1560697 (Clockwise)

Preceding gene: 187735780

Following gene: 187735782

Centisome position: 58.56

GC content: 59.56

Gene sequence:

>633_bases
ATGGAAGACCCCCTTTCATTGGAGCAATGTGCCGGACGTCTGGAACGGCGTGGATTCCGGAGTTTTGTAGTGCCGGACCT
GAGGGCGGCTGCGGAGGTTATGCGCGGCCTGGTGCGGGAGTTCAGGCCGTCGTCCGCTTCCTATGGGGATTCCATGACCC
TGAAGGATGCGGGCATTCTTGATGACCTGCGCTCCAATCCGGACATTCAGTTCTATGACGGCTTTGTTCCGGGCATGGTG
CGGGAGGAGAAATGGGAAATCCGCCGCCAGGGCATGACGGCGGACCTGTTTTTAACCGGCGTCAATGCCGTCAGCATGGA
AGGGACCCTGCACTGGGTGGACATGGTGGGCAACCGTGTGGCTCCGGTGGCATTCGGACCCCGGCGCGTCATTTTGCTGG
CCGGTTCCAACAAGCTGGTGGCAACGCCGGCAGAGGCCCGGGAACGCATCCGCCGCATTGCGCCCCTGAACGCCAGGCGG
CATGAAGGGTTCAGGACTCCCTGCATGCACACCGGAATCTGCGCGGATTGTAATTCCCCGGACCGCCTGTGCAATATTCA
CATGTCCATTGTTAAATGCTTTCCCGAGGGAAGAATTTCCGTCATTCTGATGGAAGAACCCGGAGGACTTTGA

Upstream 100 bases:

>100_bases
GGGAAGTGTCCGGTGAAATGGAAGCTCCGGCGGAAGAATAAAATCCAGGTTTCCCTGCTCCGGCGTCATGCCGGAGCAGG
GGGCTTCATGGGCCGTTTTT

Downstream 100 bases:

>100_bases
CCCATGCCTTTTCAAAACCGGATAGAAATCATGGCCCCGGCGGGGTCGTTTGAATCTCTGGCGGCCGCCTTGCAGGGCGG
AGCGGACTCCGTGTACTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MEDPLSLEQCAGRLERRGFRSFVVPDLRAAAEVMRGLVREFRPSSASYGDSMTLKDAGILDDLRSNPDIQFYDGFVPGMV
REEKWEIRRQGMTADLFLTGVNAVSMEGTLHWVDMVGNRVAPVAFGPRRVILLAGSNKLVATPAEARERIRRIAPLNARR
HEGFRTPCMHTGICADCNSPDRLCNIHMSIVKCFPEGRISVILMEEPGGL

Sequences:

>Translated_210_residues
MEDPLSLEQCAGRLERRGFRSFVVPDLRAAAEVMRGLVREFRPSSASYGDSMTLKDAGILDDLRSNPDIQFYDGFVPGMV
REEKWEIRRQGMTADLFLTGVNAVSMEGTLHWVDMVGNRVAPVAFGPRRVILLAGSNKLVATPAEARERIRRIAPLNARR
HEGFRTPCMHTGICADCNSPDRLCNIHMSIVKCFPEGRISVILMEEPGGL
>Mature_210_residues
MEDPLSLEQCAGRLERRGFRSFVVPDLRAAAEVMRGLVREFRPSSASYGDSMTLKDAGILDDLRSNPDIQFYDGFVPGMV
REEKWEIRRQGMTADLFLTGVNAVSMEGTLHWVDMVGNRVAPVAFGPRRVILLAGSNKLVATPAEARERIRRIAPLNARR
HEGFRTPCMHTGICADCNSPDRLCNIHMSIVKCFPEGRISVILMEEPGGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23401; Mature: 23401

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDPLSLEQCAGRLERRGFRSFVVPDLRAAAEVMRGLVREFRPSSASYGDSMTLKDAGIL
CCCCCCHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCH
DDLRSNPDIQFYDGFVPGMVREEKWEIRRQGMTADLFLTGVNAVSMEGTLHWVDMVGNRV
HHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCEEEECCCEEEEHHHCCEE
APVAFGPRRVILLAGSNKLVATPAEARERIRRIAPLNARRHEGFRTPCMHTGICADCNSP
CCEEECCEEEEEEECCCCEEECCHHHHHHHHHHCCCCCHHCCCCCCCCCCCCEECCCCCH
DRLCNIHMSIVKCFPEGRISVILMEEPGGL
HHHHHHHHHHHHHCCCCCEEEEEEECCCCC
>Mature Secondary Structure
MEDPLSLEQCAGRLERRGFRSFVVPDLRAAAEVMRGLVREFRPSSASYGDSMTLKDAGIL
CCCCCCHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCH
DDLRSNPDIQFYDGFVPGMVREEKWEIRRQGMTADLFLTGVNAVSMEGTLHWVDMVGNRV
HHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCEEEECCCEEEEHHHCCEE
APVAFGPRRVILLAGSNKLVATPAEARERIRRIAPLNARRHEGFRTPCMHTGICADCNSP
CCEEECCEEEEEEECCCCEEECCHHHHHHHHHHCCCCCHHCCCCCCCCCCCCEECCCCCH
DRLCNIHMSIVKCFPEGRISVILMEEPGGL
HHHHHHHHHHHHHCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA