Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735764
Identifier: 187735764
GI number: 187735764
Start: 1531134
End: 1532057
Strand: Reverse
Name: 187735764
Synonym: Amuc_1270
Alternate gene names: NA
Gene position: 1532057-1531134 (Counterclockwise)
Preceding gene: 187735766
Following gene: 187735763
Centisome position: 57.51
GC content: 58.66
Gene sequence:
>924_bases ATGATGCCGCCCGCCAAGATATTCCTGCTGCTGATTTTTTCCTGGGCAGTTTTCCCCCGCCCTCTCCAGGCCCGGGAAGA GCCGCCCGCATCCCCCTCCTGGCCGCGCTGTGTTCCTGCACGCCCCGGCAGCCGTATTCTCTTTCTGGGAAACAGCTATA CGTTTTTCAACCGCATGCCCGCCATGGTTAAAGCCATGGCAGACACCAAAGGATTGCGGCCGGACGTGCACATGCACGCG GCTCCGGCAGCATCCCTCCAGTCCCATTGGAATGACAGGCGTGCCCGCAGCAACATGGAGGGAACGGCATGGGACTTCGT TATTCTCCAGGACCAAAGCGCCACACCTATCCGGGCTCCGGAACGAACCATGGAGTTCGGAGAAAAATGGTGCTCTCTGA TACGAGCCGCCAAAGGAACGCCCATCCTGATGCTGACGTGGGGGAAAAGAGGAGCTTCCGGAACTCCGGACCCGCAGGAG CAAAAGGATCTTCTTGAAACGTATTTGAAACTTGCCCGGAGGGAAAAAGCAGCGCTCGCCCCCGTGGGCATTGCCTGGGA GAATTGCCTCAAACGCCATACTGACATCCAGCTGTACCAGACTGACGGCCGGCACCCGACGGAGGAAGGGAGCTACCTGA CGGCATGCGTAATCTACTTCACGTTATTCGGAAAGTCTCCGCTGGGCCTGCCGGGCCGCTTGTCCTTGAAAGGGACGCGG CTGAGCAATCTTCCCGCAGACAGGGCCAGAATATTGCAGACCGTCGCCAGGGATACATGCAGGCAGCTCTTTTCCGCCAC TGCCGGAACCCGTCCCGCAACCGCCGGATTGCAGGCCGCTGCATTGTCTCCGCATAGCGCAAAATCTACTCGCAAAACGG GCACGGGCCCTTTACCATGGCAACGGACATATATACTATTATGA
Upstream 100 bases:
>100_bases TCTATGAATTTACTTTTACCTGATGTATAGAAAGAGCCTGCTCACGTCATGAATTCCATTTGAAATTTTATTCCGGAAAC ATGGGAACCCGTCTAAAGCC
Downstream 100 bases:
>100_bases GCGAACAAGTCATTATCATCGGTGCCGGCTGCGCTGGTTACACGGCGGCCATTTACACCGCCCGCGCCAATCTCTCTCCG CTTCTGATCACGGGTTCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MMPPAKIFLLLIFSWAVFPRPLQAREEPPASPSWPRCVPARPGSRILFLGNSYTFFNRMPAMVKAMADTKGLRPDVHMHA APAASLQSHWNDRRARSNMEGTAWDFVILQDQSATPIRAPERTMEFGEKWCSLIRAAKGTPILMLTWGKRGASGTPDPQE QKDLLETYLKLARREKAALAPVGIAWENCLKRHTDIQLYQTDGRHPTEEGSYLTACVIYFTLFGKSPLGLPGRLSLKGTR LSNLPADRARILQTVARDTCRQLFSATAGTRPATAGLQAAALSPHSAKSTRKTGTGPLPWQRTYILL
Sequences:
>Translated_307_residues MMPPAKIFLLLIFSWAVFPRPLQAREEPPASPSWPRCVPARPGSRILFLGNSYTFFNRMPAMVKAMADTKGLRPDVHMHA APAASLQSHWNDRRARSNMEGTAWDFVILQDQSATPIRAPERTMEFGEKWCSLIRAAKGTPILMLTWGKRGASGTPDPQE QKDLLETYLKLARREKAALAPVGIAWENCLKRHTDIQLYQTDGRHPTEEGSYLTACVIYFTLFGKSPLGLPGRLSLKGTR LSNLPADRARILQTVARDTCRQLFSATAGTRPATAGLQAAALSPHSAKSTRKTGTGPLPWQRTYILL >Mature_307_residues MMPPAKIFLLLIFSWAVFPRPLQAREEPPASPSWPRCVPARPGSRILFLGNSYTFFNRMPAMVKAMADTKGLRPDVHMHA APAASLQSHWNDRRARSNMEGTAWDFVILQDQSATPIRAPERTMEFGEKWCSLIRAAKGTPILMLTWGKRGASGTPDPQE QKDLLETYLKLARREKAALAPVGIAWENCLKRHTDIQLYQTDGRHPTEEGSYLTACVIYFTLFGKSPLGLPGRLSLKGTR LSNLPADRARILQTVARDTCRQLFSATAGTRPATAGLQAAALSPHSAKSTRKTGTGPLPWQRTYILL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34076; Mature: 34076
Theoretical pI: Translated: 10.76; Mature: 10.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPPAKIFLLLIFSWAVFPRPLQAREEPPASPSWPRCVPARPGSRILFLGNSYTFFNRMP CCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHH AMVKAMADTKGLRPDVHMHAAPAASLQSHWNDRRARSNMEGTAWDFVILQDQSATPIRAP HHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCC ERTMEFGEKWCSLIRAAKGTPILMLTWGKRGASGTPDPQEQKDLLETYLKLARREKAALA HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC PVGIAWENCLKRHTDIQLYQTDGRHPTEEGSYLTACVIYFTLFGKSPLGLPGRLSLKGTR CCHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCC LSNLPADRARILQTVARDTCRQLFSATAGTRPATAGLQAAALSPHSAKSTRKTGTGPLPW CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCC QRTYILL CCEEEEC >Mature Secondary Structure MMPPAKIFLLLIFSWAVFPRPLQAREEPPASPSWPRCVPARPGSRILFLGNSYTFFNRMP CCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHH AMVKAMADTKGLRPDVHMHAAPAASLQSHWNDRRARSNMEGTAWDFVILQDQSATPIRAP HHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCC ERTMEFGEKWCSLIRAAKGTPILMLTWGKRGASGTPDPQEQKDLLETYLKLARREKAALA HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC PVGIAWENCLKRHTDIQLYQTDGRHPTEEGSYLTACVIYFTLFGKSPLGLPGRLSLKGTR CCHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCC LSNLPADRARILQTVARDTCRQLFSATAGTRPATAGLQAAALSPHSAKSTRKTGTGPLPW CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCC QRTYILL CCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA