Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735766

Identifier: 187735766

GI number: 187735766

Start: 1533171

End: 1534007

Strand: Reverse

Name: 187735766

Synonym: Amuc_1272

Alternate gene names: NA

Gene position: 1534007-1533171 (Counterclockwise)

Preceding gene: 187735767

Following gene: 187735764

Centisome position: 57.58

GC content: 60.22

Gene sequence:

>837_bases
ATGGGCCTTTTTCAGGATCAAACCAGCTCTTTGTCGGAAATCAAGCGGCTTGCCGCCCTCGTCACGGATCCCTCCCGCAG
GGAGGAAATCGGTTCGGATCAATGGCCTCTGGCCATGATTGCCTACGGGCTGGTCACCTGCAATGAAACGGGAAGAGAAG
AAGAAGGCGTCACCATTTACAATATGTTCCAATCCCGCTGCGCTCCGGACGCCCGCCGCAAATGCGCTCTGCAACTGGCA
GCTTTTATCCGGCAGCGCAAAGGGGACGGATGGAGGGCCCTGCTGCCTTTTGCCATGGCGGATGAGGCGCCGGATATTCG
CAGGCAATCCGCTTTCCTTATTTATACGCTGGCCGCGCCCCAGCCGGAGGAGCGGTTTCCCGGAATTGCCGGATTGGCGA
ATGTCATCTGCGCCTCTCCCTGTCCCGGACAGGCGTCCATGACTCCGGCGCTGGACGCCCTGATGAGCCTGGGAGACATG
CGGTTTGCCCCTTATTTGTCTTTCATTTCCAAAAATCTCCCTCCCGGGCGCCTCGCGGACCTGCTGGCCGAAACGGAGGC
CATTCCCACGGACCTGGGCTGCGGATGGCTGCTGGATATTCTGGATGAACATCCGGAGCTTACCTCCACCATTGCGGCGG
TACTGGCCGGGATGCCCTCCAGAGCCGGAGAAGTGCTGGACGTGGTCGTTCCCGTCCCCTCCTGGCAATTCACCAATTCC
GCCGTCCAGCCGCTCCATTCCTGGAGTATTCCCGAATACAGGCTGCGCATGGGAGAACGGCTCTCCAGATATCTTGCCCC
GGAAGAGAGGGAAGCCGTGGACCGGGCATGGAGCTGA

Upstream 100 bases:

>100_bases
AACAACATGCCTCAACAGCGTTCACCGGAAAACTCCGGGTTCCTGTAAGCAGTCCACGGTTTTTCCTTGGCAGGTTTCCG
CCTCCGGCTATCATGCGGGC

Downstream 100 bases:

>100_bases
GTCTTCCGGTGTATCCCAACCCGCTGCATTTTTCAAAAAGCCGTCTCCCCAAAATGCGGAACGGCTCTTCTGATTCGGAA
AATACAGACTCAGGGGCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MGLFQDQTSSLSEIKRLAALVTDPSRREEIGSDQWPLAMIAYGLVTCNETGREEEGVTIYNMFQSRCAPDARRKCALQLA
AFIRQRKGDGWRALLPFAMADEAPDIRRQSAFLIYTLAAPQPEERFPGIAGLANVICASPCPGQASMTPALDALMSLGDM
RFAPYLSFISKNLPPGRLADLLAETEAIPTDLGCGWLLDILDEHPELTSTIAAVLAGMPSRAGEVLDVVVPVPSWQFTNS
AVQPLHSWSIPEYRLRMGERLSRYLAPEEREAVDRAWS

Sequences:

>Translated_278_residues
MGLFQDQTSSLSEIKRLAALVTDPSRREEIGSDQWPLAMIAYGLVTCNETGREEEGVTIYNMFQSRCAPDARRKCALQLA
AFIRQRKGDGWRALLPFAMADEAPDIRRQSAFLIYTLAAPQPEERFPGIAGLANVICASPCPGQASMTPALDALMSLGDM
RFAPYLSFISKNLPPGRLADLLAETEAIPTDLGCGWLLDILDEHPELTSTIAAVLAGMPSRAGEVLDVVVPVPSWQFTNS
AVQPLHSWSIPEYRLRMGERLSRYLAPEEREAVDRAWS
>Mature_277_residues
GLFQDQTSSLSEIKRLAALVTDPSRREEIGSDQWPLAMIAYGLVTCNETGREEEGVTIYNMFQSRCAPDARRKCALQLAA
FIRQRKGDGWRALLPFAMADEAPDIRRQSAFLIYTLAAPQPEERFPGIAGLANVICASPCPGQASMTPALDALMSLGDMR
FAPYLSFISKNLPPGRLADLLAETEAIPTDLGCGWLLDILDEHPELTSTIAAVLAGMPSRAGEVLDVVVPVPSWQFTNSA
VQPLHSWSIPEYRLRMGERLSRYLAPEEREAVDRAWS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30623; Mature: 30492

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS00697 DNA_LIGASE_A1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLFQDQTSSLSEIKRLAALVTDPSRREEIGSDQWPLAMIAYGLVTCNETGREEEGVTIY
CCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHH
NMFQSRCAPDARRKCALQLAAFIRQRKGDGWRALLPFAMADEAPDIRRQSAFLIYTLAAP
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHCCEEEEEEECCC
QPEERFPGIAGLANVICASPCPGQASMTPALDALMSLGDMRFAPYLSFISKNLPPGRLAD
CCHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHH
LLAETEAIPTDLGCGWLLDILDEHPELTSTIAAVLAGMPSRAGEVLDVVVPVPSWQFTNS
HHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCH
AVQPLHSWSIPEYRLRMGERLSRYLAPEEREAVDRAWS
HHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCC
>Mature Secondary Structure 
GLFQDQTSSLSEIKRLAALVTDPSRREEIGSDQWPLAMIAYGLVTCNETGREEEGVTIY
CCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHH
NMFQSRCAPDARRKCALQLAAFIRQRKGDGWRALLPFAMADEAPDIRRQSAFLIYTLAAP
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHCCEEEEEEECCC
QPEERFPGIAGLANVICASPCPGQASMTPALDALMSLGDMRFAPYLSFISKNLPPGRLAD
CCHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHH
LLAETEAIPTDLGCGWLLDILDEHPELTSTIAAVLAGMPSRAGEVLDVVVPVPSWQFTNS
HHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCH
AVQPLHSWSIPEYRLRMGERLSRYLAPEEREAVDRAWS
HHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA