Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is trxB/A [H]

Identifier: 187735763

GI number: 187735763

Start: 1530208

End: 1531137

Strand: Reverse

Name: trxB/A [H]

Synonym: Amuc_1269

Alternate gene names: 187735763

Gene position: 1531137-1530208 (Counterclockwise)

Preceding gene: 187735764

Following gene: 187735762

Centisome position: 57.47

GC content: 59.14

Gene sequence:

>930_bases
ATGAGCGAACAAGTCATTATCATCGGTGCCGGCTGCGCTGGTTACACGGCGGCCATTTACACCGCCCGCGCCAATCTCTC
TCCGCTTCTGATCACGGGTTCCCAAATCGGCGGACAACTGACCACCACGACGGAAGTGGAAAACTTCCCCGGCTTTCCGG
ACGGCGTGATGGGGCCGGACCTGATGTTCCTGATGCAGCAGCAGGCGGAAAAGTTCGGCACCCGGTTTGCATATGAGGAC
GTCAAGAGCGTCGTCAGGGATGAAGCCACCGGGCTGTTCACCGTGAAGACCAGCGGCCAGAATTACGAAACCCGGAGTAT
CATTGTGGCTACGGGAGCATCCGCCCGCTATCTGGGAATACCGGGAGAGGAAGGGCTGGTTGGCCACGGACTCACCGCCT
GCGCCACCTGTGACGGAGCTTTTTACCGGGACGTGCCTGTGTGCGTGGTAGGCGGAGGAGACAGCGCCTGTGAAGAAGCC
ATGTTCCTGACGCGCTTCGCTTCCCGGGTGTACCTGATCCACCGCCGCGACACGCTCCGCGCTTCCAAAATCATGGCGGA
ACGAACGCTGTCCAATGAAAAGATTTTCCCCATGTGGAATTCCACCATCGTAAGCTATAAGACGGACGACAAGGGAGAAC
TGGAAGCCGTCATGCTGAAGGACGTAGTAGAAGGGGATGAAACGGAACTTCCCGTCAAATGCGTCTTTATGGCGATCGGG
CACACGCCGAACACTTCTTTCCTGGGGGATCTGGTGGACCGGGACGATGCCGGCTACATTATCCGGGAAACAGGGATGAT
GGCGACCAGGACGCCGGGATTGTTCGCCGCCGGAGATGTGGCGGATCCTCACTACCGCCAGGCCATTTCTTCCGCCGGAA
TGGGCTGCAGCGCCGCGATTGAAGCGGAACGCTACCTGCTGGGGCTGTAA

Upstream 100 bases:

>100_bases
CCGCCGGATTGCAGGCCGCTGCATTGTCTCCGCATAGCGCAAAATCTACTCGCAAAACGGGCACGGGCCCTTTACCATGG
CAACGGACATATATACTATT

Downstream 100 bases:

>100_bases
ACCCATCTTTCGGAACGGGCCGGAATTCCCAGCGGGATTTCCGGCCCTTCCCCGCTACAGGAAAACGGACATGCACCATT
ACAGCATTTTTGAGCTTTTC

Product: thioredoxin reductase

Products: NA

Alternate protein names: Thioredoxin reductase; TRXR; Thioredoxin [H]

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MSEQVIIIGAGCAGYTAAIYTARANLSPLLITGSQIGGQLTTTTEVENFPGFPDGVMGPDLMFLMQQQAEKFGTRFAYED
VKSVVRDEATGLFTVKTSGQNYETRSIIVATGASARYLGIPGEEGLVGHGLTACATCDGAFYRDVPVCVVGGGDSACEEA
MFLTRFASRVYLIHRRDTLRASKIMAERTLSNEKIFPMWNSTIVSYKTDDKGELEAVMLKDVVEGDETELPVKCVFMAIG
HTPNTSFLGDLVDRDDAGYIIRETGMMATRTPGLFAAGDVADPHYRQAISSAGMGCSAAIEAERYLLGL

Sequences:

>Translated_309_residues
MSEQVIIIGAGCAGYTAAIYTARANLSPLLITGSQIGGQLTTTTEVENFPGFPDGVMGPDLMFLMQQQAEKFGTRFAYED
VKSVVRDEATGLFTVKTSGQNYETRSIIVATGASARYLGIPGEEGLVGHGLTACATCDGAFYRDVPVCVVGGGDSACEEA
MFLTRFASRVYLIHRRDTLRASKIMAERTLSNEKIFPMWNSTIVSYKTDDKGELEAVMLKDVVEGDETELPVKCVFMAIG
HTPNTSFLGDLVDRDDAGYIIRETGMMATRTPGLFAAGDVADPHYRQAISSAGMGCSAAIEAERYLLGL
>Mature_308_residues
SEQVIIIGAGCAGYTAAIYTARANLSPLLITGSQIGGQLTTTTEVENFPGFPDGVMGPDLMFLMQQQAEKFGTRFAYEDV
KSVVRDEATGLFTVKTSGQNYETRSIIVATGASARYLGIPGEEGLVGHGLTACATCDGAFYRDVPVCVVGGGDSACEEAM
FLTRFASRVYLIHRRDTLRASKIMAERTLSNEKIFPMWNSTIVSYKTDDKGELEAVMLKDVVEGDETELPVKCVFMAIGH
TPNTSFLGDLVDRDDAGYIIRETGMMATRTPGLFAAGDVADPHYRQAISSAGMGCSAAIEAERYLLGL

Specific function: Unknown

COG id: COG0492

COG function: function code O; Thioredoxin reductase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1787114, Length=314, Percent_Identity=49.0445859872611, Blast_Score=278, Evalue=4e-76,
Organism=Escherichia coli, GI87081763, Length=306, Percent_Identity=31.6993464052288, Blast_Score=127, Evalue=1e-30,
Organism=Saccharomyces cerevisiae, GI6320560, Length=320, Percent_Identity=49.0625, Blast_Score=291, Evalue=1e-79,
Organism=Saccharomyces cerevisiae, GI6321898, Length=317, Percent_Identity=45.7413249211356, Blast_Score=266, Evalue=4e-72,

Paralogues:

None

Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013027
- InterPro:   IPR008255
- InterPro:   IPR001327
- InterPro:   IPR000103
- InterPro:   IPR005982
- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR017937
- InterPro:   IPR013766
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF00085 Thioredoxin [H]

EC number: =1.8.1.9 [H]

Molecular weight: Translated: 33214; Mature: 33083

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: PS00573 PYRIDINE_REDOX_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQVIIIGAGCAGYTAAIYTARANLSPLLITGSQIGGQLTTTTEVENFPGFPDGVMGPD
CCCCEEEEECCCCCCEEEEEEECCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCHH
LMFLMQQQAEKFGTRFAYEDVKSVVRDEATGLFTVKTSGQNYETRSIIVATGASARYLGI
HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEEECCCEEEEEC
PGEEGLVGHGLTACATCDGAFYRDVPVCVVGGGDSACEEAMFLTRFASRVYLIHRRDTLR
CCCCCCCCCCCCEEEECCCCEECCCCEEEECCCCHHHHHHHHHHHHHHHEEEEECCCHHH
ASKIMAERTLSNEKIFPMWNSTIVSYKTDDKGELEAVMLKDVVEGDETELPVKCVFMAIG
HHHHHHHHHCCCCEEEEEECCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEC
HTPNTSFLGDLVDRDDAGYIIRETGMMATRTPGLFAAGDVADPHYRQAISSAGMGCSAAI
CCCCHHHHHHHHCCCCCCEEEEECCCEEECCCCCEEECCCCCHHHHHHHHHCCCCCHHHH
EAERYLLGL
HHHHHEECC
>Mature Secondary Structure 
SEQVIIIGAGCAGYTAAIYTARANLSPLLITGSQIGGQLTTTTEVENFPGFPDGVMGPD
CCCEEEEECCCCCCEEEEEEECCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCHH
LMFLMQQQAEKFGTRFAYEDVKSVVRDEATGLFTVKTSGQNYETRSIIVATGASARYLGI
HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEEECCCEEEEEC
PGEEGLVGHGLTACATCDGAFYRDVPVCVVGGGDSACEEAMFLTRFASRVYLIHRRDTLR
CCCCCCCCCCCCEEEECCCCEECCCCEEEECCCCHHHHHHHHHHHHHHHEEEEECCCHHH
ASKIMAERTLSNEKIFPMWNSTIVSYKTDDKGELEAVMLKDVVEGDETELPVKCVFMAIG
HHHHHHHHHCCCCEEEEEECCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEC
HTPNTSFLGDLVDRDDAGYIIRETGMMATRTPGLFAAGDVADPHYRQAISSAGMGCSAAI
CCCCHHHHHHHHCCCCCCEEEEECCCEEECCCCCEEECCCCCHHHHHHHHHCCCCCHHHH
EAERYLLGL
HHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969512; 7476189; 11234002 [H]