Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735716

Identifier: 187735716

GI number: 187735716

Start: 1468707

End: 1470575

Strand: Reverse

Name: 187735716

Synonym: Amuc_1222

Alternate gene names: NA

Gene position: 1470575-1468707 (Counterclockwise)

Preceding gene: 187735720

Following gene: 187735715

Centisome position: 55.2

GC content: 53.88

Gene sequence:

>1869_bases
ATGGCATCTACGTCCCCCCAATCTTCCAGCCCTCTCCCCTCCTGCTTGGAAAAACCGCTGCCTCTGGATGGATTCCAAGG
TACTCCGGATGAAGTAGAACAGCAATGGTACGATCAAGTTTATCTGGGTTCCGGAGACAGAATGAAGCAGCTTACCTGGA
GAGCCGTCATCGTAGGCATGCTTCTAGGCTCCATCCTTTCCCTCACTAATCTGTACGCCAACCTCAAAATGGGATGGTCC
TTTGGGGTGGCTCTGACGGCAGGAATTATCTCTTTTGCCCTCTGGAACGCCTTTGTGCGCCTGGGCATTTCCAAATCCCC
CATGACTATTCTGGAAAATACATGCATGCAGTCCGCTGCCAGTTCTGCAGGCTATTCTACAGGGGGAACCCTCACCTCTG
CCGTAGCCGCCCTGCTCCTGCTGACAGGACAGCACATGCCTCTTGGCACTACCTTCGCCTGGATATTTTTCATTGCCGTA
CTGGGTGTCACCATGGCCATTCCGATGAAACGCCAGATGATCAACATTGAACAAATAAGGTTCCCAGACAGTATTGCTAC
GGCGGAAACCCTCAAAGTTCTCTATTCTGAAGGCAAAAAGGCGGCGGGACAGGCCAAAGCCCTTCTTTATTCTGCCCTTT
TCGCCGCCGCTAATGCCATCGCCATGGCTGCAGGAGGAGAACGATGGCTTGGAACGGTCCAGCAACATATCCTCGGCAAC
TGGTACCAGCGTACTATCTTCTTCAAATGGGATCTCATGTTCGTGGGTGCGGGAGCTCTGGTAGGCATGAAAACATCCCT
CAGCCTCTTCATCGGAGGAACCGTTTGCTGGGCTCTTTACGTTCCGTGGCTGGAAAGCCAGAAATTGCTTCCCGCGGGAG
CAGGTTATCGGGAGAGCGTAAGCTGGACCCTGTGGGGAGGAACCGCCTGCATGGTCGTCGCCAGCATTGTGGCTTTCCTA
TTCCAATGGAAAAGCATTGTTCGTTCCTTTTCTTCCCTGGGTGCCATGTTTTCCCTGAGTAAAAAACGAAAACTGACAGA
TGTGGAAAAAATAGAAACGCCCATGAGCTGGTTTCTAACAGGCCAGCTTATCTCTCTGGGAGCTCTCGGCTATCTGGCTC
ATACATCATTTAACGTTCCGTACTGGATGAGCTGCATCGCGGTAGTCATATCCTTTTTCCTGGCGCTGGTCGTCTGCCGA
ATCACCGGAGAAGCCAATATTACACCCACCGGAGCCATGGGAAAAGTTACACAGCTCATCTTCGGAGGGATTGCACCCGG
GCACGTAACAGCCAACCTGATGGCGGCCAATATCACTTCAGGAGCGTCCAGTTCCTCGGCAGACCTGCTCGTAGACCTCA
AAGTAGGCTACCTGCTGGGAGCTAACCCCCGCAAACAATTCATCGCCCAGTTTTCCGGAATTTTTCTGGGAACCCTCGTC
TCCGTGCTGGCCTTCCGCTCCATGGTTCCGGATGCGAACGCTCTCCAGGCTTTCAATGCTCCGGGAGCCAGAACATGGGC
GGCCACAGCGGAAGCACTGGGCATGGGGTTCAGCCATTTGCACAGCATCAAGGTGCTTTCCATCATTGCAGGCGGTATTC
TCGGACTCATTCTGGTGCTTATTCCCCGCTATATTCCCCGGACAGGAAAATGGCTCCCCACCCCCATCGGCTTCGGCCTG
GCCTGGGCCATCCAGTGGAACGACTCCTTCCTTTTCTTTACAGGAGCTGTGCTCGGCTGGGCTGCGGACCATCTTTTCAA
GGCCAAATCACGAGAATATAAAGTCCCCACCGCCTCCGGCATCATTGCAGGCGCAGCCCTCACGGGAATGGCCATTCTGA
TGTTCAGCATTTACCAGGCAGCCCTCTGA

Upstream 100 bases:

>100_bases
CGTCACAAGCACGCAAGTCTCAAGCAGAAGGAACGCCGAAAGCAGAGAAAAACAGATACGACTTTTCCACCACTCCCGCA
AATGCTATATTATGAACTGT

Downstream 100 bases:

>100_bases
ACGAAAAGGCTATATTCAAAAAAAAATCCATCTCTACAAAAGATCCTGTACAGCTCATCTTTTGGAACCGGAGCATAAAT
CGGGGCAGTACAATAAGAAT

Product: oligopeptide transporter, OPT superfamily

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 622; Mature: 621

Protein sequence:

>622_residues
MASTSPQSSSPLPSCLEKPLPLDGFQGTPDEVEQQWYDQVYLGSGDRMKQLTWRAVIVGMLLGSILSLTNLYANLKMGWS
FGVALTAGIISFALWNAFVRLGISKSPMTILENTCMQSAASSAGYSTGGTLTSAVAALLLLTGQHMPLGTTFAWIFFIAV
LGVTMAIPMKRQMINIEQIRFPDSIATAETLKVLYSEGKKAAGQAKALLYSALFAAANAIAMAAGGERWLGTVQQHILGN
WYQRTIFFKWDLMFVGAGALVGMKTSLSLFIGGTVCWALYVPWLESQKLLPAGAGYRESVSWTLWGGTACMVVASIVAFL
FQWKSIVRSFSSLGAMFSLSKKRKLTDVEKIETPMSWFLTGQLISLGALGYLAHTSFNVPYWMSCIAVVISFFLALVVCR
ITGEANITPTGAMGKVTQLIFGGIAPGHVTANLMAANITSGASSSSADLLVDLKVGYLLGANPRKQFIAQFSGIFLGTLV
SVLAFRSMVPDANALQAFNAPGARTWAATAEALGMGFSHLHSIKVLSIIAGGILGLILVLIPRYIPRTGKWLPTPIGFGL
AWAIQWNDSFLFFTGAVLGWAADHLFKAKSREYKVPTASGIIAGAALTGMAILMFSIYQAAL

Sequences:

>Translated_622_residues
MASTSPQSSSPLPSCLEKPLPLDGFQGTPDEVEQQWYDQVYLGSGDRMKQLTWRAVIVGMLLGSILSLTNLYANLKMGWS
FGVALTAGIISFALWNAFVRLGISKSPMTILENTCMQSAASSAGYSTGGTLTSAVAALLLLTGQHMPLGTTFAWIFFIAV
LGVTMAIPMKRQMINIEQIRFPDSIATAETLKVLYSEGKKAAGQAKALLYSALFAAANAIAMAAGGERWLGTVQQHILGN
WYQRTIFFKWDLMFVGAGALVGMKTSLSLFIGGTVCWALYVPWLESQKLLPAGAGYRESVSWTLWGGTACMVVASIVAFL
FQWKSIVRSFSSLGAMFSLSKKRKLTDVEKIETPMSWFLTGQLISLGALGYLAHTSFNVPYWMSCIAVVISFFLALVVCR
ITGEANITPTGAMGKVTQLIFGGIAPGHVTANLMAANITSGASSSSADLLVDLKVGYLLGANPRKQFIAQFSGIFLGTLV
SVLAFRSMVPDANALQAFNAPGARTWAATAEALGMGFSHLHSIKVLSIIAGGILGLILVLIPRYIPRTGKWLPTPIGFGL
AWAIQWNDSFLFFTGAVLGWAADHLFKAKSREYKVPTASGIIAGAALTGMAILMFSIYQAAL
>Mature_621_residues
ASTSPQSSSPLPSCLEKPLPLDGFQGTPDEVEQQWYDQVYLGSGDRMKQLTWRAVIVGMLLGSILSLTNLYANLKMGWSF
GVALTAGIISFALWNAFVRLGISKSPMTILENTCMQSAASSAGYSTGGTLTSAVAALLLLTGQHMPLGTTFAWIFFIAVL
GVTMAIPMKRQMINIEQIRFPDSIATAETLKVLYSEGKKAAGQAKALLYSALFAAANAIAMAAGGERWLGTVQQHILGNW
YQRTIFFKWDLMFVGAGALVGMKTSLSLFIGGTVCWALYVPWLESQKLLPAGAGYRESVSWTLWGGTACMVVASIVAFLF
QWKSIVRSFSSLGAMFSLSKKRKLTDVEKIETPMSWFLTGQLISLGALGYLAHTSFNVPYWMSCIAVVISFFLALVVCRI
TGEANITPTGAMGKVTQLIFGGIAPGHVTANLMAANITSGASSSSADLLVDLKVGYLLGANPRKQFIAQFSGIFLGTLVS
VLAFRSMVPDANALQAFNAPGARTWAATAEALGMGFSHLHSIKVLSIIAGGILGLILVLIPRYIPRTGKWLPTPIGFGLA
WAIQWNDSFLFFTGAVLGWAADHLFKAKSREYKVPTASGIIAGAALTGMAILMFSIYQAAL

Specific function: Unknown

COG id: COG1297

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the oligopeptide OPT transporter family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6321324, Length=569, Percent_Identity=22.1441124780316, Blast_Score=118, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004814
- InterPro:   IPR004813 [H]

Pfam domain/function: PF03169 OPT [H]

EC number: NA

Molecular weight: Translated: 66647; Mature: 66516

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASTSPQSSSPLPSCLEKPLPLDGFQGTPDEVEQQWYDQVYLGSGDRMKQLTWRAVIVGM
CCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHH
LLGSILSLTNLYANLKMGWSFGVALTAGIISFALWNAFVRLGISKSPMTILENTCMQSAA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
SSAGYSTGGTLTSAVAALLLLTGQHMPLGTTFAWIFFIAVLGVTMAIPMKRQMINIEQIR
HCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHEE
FPDSIATAETLKVLYSEGKKAAGQAKALLYSALFAAANAIAMAAGGERWLGTVQQHILGN
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
WYQRTIFFKWDLMFVGAGALVGMKTSLSLFIGGTVCWALYVPWLESQKLLPAGAGYRESV
HHHEEEEEEEEEHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
SWTLWGGTACMVVASIVAFLFQWKSIVRSFSSLGAMFSLSKKRKLTDVEKIETPMSWFLT
CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHH
GQLISLGALGYLAHTSFNVPYWMSCIAVVISFFLALVVCRITGEANITPTGAMGKVTQLI
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
FGGIAPGHVTANLMAANITSGASSSSADLLVDLKVGYLLGANPRKQFIAQFSGIFLGTLV
HCCCCCCHHHHHHHEEECCCCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHH
SVLAFRSMVPDANALQAFNAPGARTWAATAEALGMGFSHLHSIKVLSIIAGGILGLILVL
HHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
IPRYIPRTGKWLPTPIGFGLAWAIQWNDSFLFFTGAVLGWAADHLFKAKSREYKVPTASG
HHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHH
IIAGAALTGMAILMFSIYQAAL
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ASTSPQSSSPLPSCLEKPLPLDGFQGTPDEVEQQWYDQVYLGSGDRMKQLTWRAVIVGM
CCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHH
LLGSILSLTNLYANLKMGWSFGVALTAGIISFALWNAFVRLGISKSPMTILENTCMQSAA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
SSAGYSTGGTLTSAVAALLLLTGQHMPLGTTFAWIFFIAVLGVTMAIPMKRQMINIEQIR
HCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHEE
FPDSIATAETLKVLYSEGKKAAGQAKALLYSALFAAANAIAMAAGGERWLGTVQQHILGN
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
WYQRTIFFKWDLMFVGAGALVGMKTSLSLFIGGTVCWALYVPWLESQKLLPAGAGYRESV
HHHEEEEEEEEEHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
SWTLWGGTACMVVASIVAFLFQWKSIVRSFSSLGAMFSLSKKRKLTDVEKIETPMSWFLT
CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHH
GQLISLGALGYLAHTSFNVPYWMSCIAVVISFFLALVVCRITGEANITPTGAMGKVTQLI
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
FGGIAPGHVTANLMAANITSGASSSSADLLVDLKVGYLLGANPRKQFIAQFSGIFLGTLV
HCCCCCCHHHHHHHEEECCCCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHH
SVLAFRSMVPDANALQAFNAPGARTWAATAEALGMGFSHLHSIKVLSIIAGGILGLILVL
HHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
IPRYIPRTGKWLPTPIGFGLAWAIQWNDSFLFFTGAVLGWAADHLFKAKSREYKVPTASG
HHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHH
IIAGAALTGMAILMFSIYQAAL
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]