Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735715
Identifier: 187735715
GI number: 187735715
Start: 1467867
End: 1468286
Strand: Reverse
Name: 187735715
Synonym: Amuc_1221
Alternate gene names: NA
Gene position: 1468286-1467867 (Counterclockwise)
Preceding gene: 187735716
Following gene: 187735713
Centisome position: 55.11
GC content: 47.62
Gene sequence:
>420_bases GTGCATATCAATTGTATCAAGTTATATTTCCAGCCCAAAGATGAAACCCATTATTTCTGTTATCTCCATTTTTTATCGTT GGGAACCGCCCAAGCAGCCACCATATTCTCCACCACGAACACTAACACCGCCAACAACTACTTTGGCTCTGCGACCCAAT CGTCTTCTTCCGTTATGTCCGCCGCCACGAATAGAAAGGAAGCAACACTTCCCGAAACCGTCTATTTAAACAGCCTTTCT CTGGACATGCATAGCGGCTGCGGAACCGGCACCTATAAAAACAATATCCTGAACTCTTGGGAGGGCATGTATTTGTCGGC AGTAAACTTCTCCACAAGTAATGAAGTGGTTCCGGAACCGGCAACCGCTACGCTGGGTCTGTTCGGTCTTAGCGCTCTAT TGTTACGCCACCGCCGATAA
Upstream 100 bases:
>100_bases TTTCCATCTAAAATTTTAAATAAATTGAATATTTCTTTATAACATCAATATATTTCATGTTTTTCAAAAAACGATTCTAA ATTCGATAGATTTTTTCCCA
Downstream 100 bases:
>100_bases ATTTTATCACCATGCCATCTTTCAAGGAAGAAAGGGGGGAAATCCCCCCCTTCTTCCTTTTTTCGGCGAGGGAAACAAAC TGATTCCGGAACAAATGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MHINCIKLYFQPKDETHYFCYLHFLSLGTAQAATIFSTTNTNTANNYFGSATQSSSSVMSAATNRKEATLPETVYLNSLS LDMHSGCGTGTYKNNILNSWEGMYLSAVNFSTSNEVVPEPATATLGLFGLSALLLRHRR
Sequences:
>Translated_139_residues MHINCIKLYFQPKDETHYFCYLHFLSLGTAQAATIFSTTNTNTANNYFGSATQSSSSVMSAATNRKEATLPETVYLNSLS LDMHSGCGTGTYKNNILNSWEGMYLSAVNFSTSNEVVPEPATATLGLFGLSALLLRHRR >Mature_139_residues MHINCIKLYFQPKDETHYFCYLHFLSLGTAQAATIFSTTNTNTANNYFGSATQSSSSVMSAATNRKEATLPETVYLNSLS LDMHSGCGTGTYKNNILNSWEGMYLSAVNFSTSNEVVPEPATATLGLFGLSALLLRHRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15260; Mature: 15260
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHINCIKLYFQPKDETHYFCYLHFLSLGTAQAATIFSTTNTNTANNYFGSATQSSSSVMS CCCEEEEEEEECCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHH AATNRKEATLPETVYLNSLSLDMHSGCGTGTYKNNILNSWEGMYLSAVNFSTSNEVVPEP HHCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCC ATATLGLFGLSALLLRHRR CHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHINCIKLYFQPKDETHYFCYLHFLSLGTAQAATIFSTTNTNTANNYFGSATQSSSSVMS CCCEEEEEEEECCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHH AATNRKEATLPETVYLNSLSLDMHSGCGTGTYKNNILNSWEGMYLSAVNFSTSNEVVPEP HHCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCC ATATLGLFGLSALLLRHRR CHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA