Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735720
Identifier: 187735720
GI number: 187735720
Start: 1474169
End: 1475209
Strand: Reverse
Name: 187735720
Synonym: Amuc_1226
Alternate gene names: NA
Gene position: 1475209-1474169 (Counterclockwise)
Preceding gene: 187735721
Following gene: 187735716
Centisome position: 55.37
GC content: 51.01
Gene sequence:
>1041_bases GTGCATCGGCTCAGAAGACGCAAACATCTGGCAGAACCTCTGCCAACGCTATCCGGAGTCAACCACTTGGGAATAGCGCT GGGTGGCGTCTCTCTGTGCCTGTGGGTCATCGTCGTCACTATTTTCTGGACCGGTTCAGACACGATGGCTTTTGCAACGT CACTGCCCATATGGGCTTGCTGTCTCATTTTCTCCTTTCCGGCGCTCATTGCATGGCTGGTCTTCGGTTCCCGGATCGGT CTGCTTGGCATTATCGTCTGGGTTGCGTACGGCATCGTCATTACAGACTTTCTCCCGCCCATTGCCAGAACTGGAATGGA ATACTACAAAATGCCGCCATCTCCGGATGCCAGGCAAATAAGGGTTCTTACCTTGTACGAGGGCTGCGAGGCCCCCCCTC CCATTGAACAAATATCCAAACTCCGTGCAGATGTCATTTTCGTCCAAGGCTGCAGCAACTATAACCGAACACTCAAATTT GCCTACAGTATTTTCGGTAGAACCTCTTATATCAAGCAAATAGGAAGTTGCGCGATCATTGTAAGGCACGGTCAGATTGG TCCAGCCCAGAGCATCACGGACACAGCCGGTTTGATTGTAGACTGGATACCGGAAAATTCCTCCTTGGCGATTCGGCTCA TCAACATCAGTCTGGAACCTTTTGAACATCGCTTCGACCTGTACTCCCCCGCCTGCTGGAAATATTTCCATACACTCCGC TTCATCCACCGTAAACAACTTCAATACCTGTTTGATACCCTGAGGGAAGTAGGAACCCAGCATGGAGAACTTCCCATTAT CATGGCCGGGAACTTCAGCGCCGCCCCTCAATCCCCCATTTTCTCCAAACTCAGTTCCGACTTTCAGGATTGCTTCAAAC TGAAAGGTGCCGGTTACGGAGCTACGCAACCTGTCAATTTCCCTCTATTACGCCTAGACCGAGTTTTTTGCACGCCGCCG CTCAAACCTGAAAGAGCCAGTACTGTGCTGATACCGGATACTATCCGCCGTTCTATCGTAGCAGACATTGCAATTCCCTG A
Upstream 100 bases:
>100_bases AGCTATTGCCAAGGGTAAGGAAACAGCCGCGGCGGAAATGAAAAAGCTGACAGGAGGCCTGGATCTCCCTCCAGGCATGG GCTTCTAATCTGTCACCACA
Downstream 100 bases:
>100_bases TCTATACCCCTTACAGCACGGCAACGCCGTTCCTCCTCAGGAAAAATCTTGCCTGTAAAAAGCAAAGATTTCCGGCATCT ACAACGTCTTTAATGCACGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MHRLRRRKHLAEPLPTLSGVNHLGIALGGVSLCLWVIVVTIFWTGSDTMAFATSLPIWACCLIFSFPALIAWLVFGSRIG LLGIIVWVAYGIVITDFLPPIARTGMEYYKMPPSPDARQIRVLTLYEGCEAPPPIEQISKLRADVIFVQGCSNYNRTLKF AYSIFGRTSYIKQIGSCAIIVRHGQIGPAQSITDTAGLIVDWIPENSSLAIRLINISLEPFEHRFDLYSPACWKYFHTLR FIHRKQLQYLFDTLREVGTQHGELPIIMAGNFSAAPQSPIFSKLSSDFQDCFKLKGAGYGATQPVNFPLLRLDRVFCTPP LKPERASTVLIPDTIRRSIVADIAIP
Sequences:
>Translated_346_residues MHRLRRRKHLAEPLPTLSGVNHLGIALGGVSLCLWVIVVTIFWTGSDTMAFATSLPIWACCLIFSFPALIAWLVFGSRIG LLGIIVWVAYGIVITDFLPPIARTGMEYYKMPPSPDARQIRVLTLYEGCEAPPPIEQISKLRADVIFVQGCSNYNRTLKF AYSIFGRTSYIKQIGSCAIIVRHGQIGPAQSITDTAGLIVDWIPENSSLAIRLINISLEPFEHRFDLYSPACWKYFHTLR FIHRKQLQYLFDTLREVGTQHGELPIIMAGNFSAAPQSPIFSKLSSDFQDCFKLKGAGYGATQPVNFPLLRLDRVFCTPP LKPERASTVLIPDTIRRSIVADIAIP >Mature_346_residues MHRLRRRKHLAEPLPTLSGVNHLGIALGGVSLCLWVIVVTIFWTGSDTMAFATSLPIWACCLIFSFPALIAWLVFGSRIG LLGIIVWVAYGIVITDFLPPIARTGMEYYKMPPSPDARQIRVLTLYEGCEAPPPIEQISKLRADVIFVQGCSNYNRTLKF AYSIFGRTSYIKQIGSCAIIVRHGQIGPAQSITDTAGLIVDWIPENSSLAIRLINISLEPFEHRFDLYSPACWKYFHTLR FIHRKQLQYLFDTLREVGTQHGELPIIMAGNFSAAPQSPIFSKLSSDFQDCFKLKGAGYGATQPVNFPLLRLDRVFCTPP LKPERASTVLIPDTIRRSIVADIAIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38681; Mature: 38681
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRLRRRKHLAEPLPTLSGVNHLGIALGGVSLCLWVIVVTIFWTGSDTMAFATSLPIWAC CCHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHH CLIFSFPALIAWLVFGSRIGLLGIIVWVAYGIVITDFLPPIARTGMEYYKMPPSPDARQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCCCEE RVLTLYEGCEAPPPIEQISKLRADVIFVQGCSNYNRTLKFAYSIFGRTSYIKQIGSCAII EEEEEECCCCCCCCHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEE VRHGQIGPAQSITDTAGLIVDWIPENSSLAIRLINISLEPFEHRFDLYSPACWKYFHTLR EEECCCCCCCCHHHCCCEEEEECCCCCCEEEEEEEEECCCHHHHHCCCCHHHHHHHHHHH FIHRKQLQYLFDTLREVGTQHGELPIIMAGNFSAAPQSPIFSKLSSDFQDCFKLKGAGYG HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC ATQPVNFPLLRLDRVFCTPPLKPERASTVLIPDTIRRSIVADIAIP CCCCCCCHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHCCCC >Mature Secondary Structure MHRLRRRKHLAEPLPTLSGVNHLGIALGGVSLCLWVIVVTIFWTGSDTMAFATSLPIWAC CCHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHH CLIFSFPALIAWLVFGSRIGLLGIIVWVAYGIVITDFLPPIARTGMEYYKMPPSPDARQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCCCEE RVLTLYEGCEAPPPIEQISKLRADVIFVQGCSNYNRTLKFAYSIFGRTSYIKQIGSCAII EEEEEECCCCCCCCHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEE VRHGQIGPAQSITDTAGLIVDWIPENSSLAIRLINISLEPFEHRFDLYSPACWKYFHTLR EEECCCCCCCCHHHCCCEEEEECCCCCCEEEEEEEEECCCHHHHHCCCCHHHHHHHHHHH FIHRKQLQYLFDTLREVGTQHGELPIIMAGNFSAAPQSPIFSKLSSDFQDCFKLKGAGYG HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC ATQPVNFPLLRLDRVFCTPPLKPERASTVLIPDTIRRSIVADIAIP CCCCCCCHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA