Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is cwlH [H]

Identifier: 187735705

GI number: 187735705

Start: 1447575

End: 1448246

Strand: Direct

Name: cwlH [H]

Synonym: Amuc_1211

Alternate gene names: 187735705

Gene position: 1447575-1448246 (Clockwise)

Preceding gene: 187735702

Following gene: 187735706

Centisome position: 54.34

GC content: 60.57

Gene sequence:

>672_bases
ATGAATGTCAGAATGTTGTCGGCAAATGCGGTGTTTCTGATGCTGCCGGCTTTGCTGGCGGCGTGTTCGGACGCCCCGCG
CCCGCCCGCCGTCAGCTTCAGGATTCAGAATGTGCCTCCCGTGCCGCGCACGATGGCCCAGATGTCCAGAGAGGTGCACA
TTAACCGTGATTTCATGTCCCCGCGCTCCCGTGCTCGCCGGGCCGCCCATTCCATGCATCCGCGGTTTATCACGATTCAC
AGCACAGCCAATCCCAAGGGTGACGCCGCGGCGCATGCCCGGGCATTGAAAAGGGGGGCCATGGGGTCCCTGAACTGGCA
TTTTACGGTGGACCAGTACCGTGCCGTCCAGCATATTCCGCTGAATGAGACGGGCCGCCACGCAGACCGGGGCGGCCCCG
GAGACATGTACTCCATCGGCATTGAGATGGGGGAGGTAAGGAGCCATAACCCCATTGTTACCTGGAACCGCTCCGCCAAG
CTGACGGCAGTGCTGATGAAGCAGTACCATATTCCGCTCCGTAATGTGGTACCCCATTATTATTGGACGGGGAAGAATTG
CCCGGCCCCGCTGCTGACCAACGGCCGTCCGGGACATAAATGGAGCTGGTTCATTTCCCGCGTGGATTATTACAGGCGCT
GTCTGGAGACACGGCCCGCCGCAGCGTTCTGA

Upstream 100 bases:

>100_bases
TATCCCTTTTTCCTGCTGCCGTGTTTCGGAAAGGGTGAAAAAGACTGTTTTGACTGGAAATCTGCTTGCCAGCTCGTCTG
CGATAGTCTAGGGAAGAATC

Downstream 100 bases:

>100_bases
CGGGTACGCGCACATGGTGCATGATAAGGGATACGTTCTTGGGTTCATGGCTGGAGAATTGCTTTTAACGTCTTCTCTGG
AGGAATGCGTTTTTATCCGC

Product: N-acetylmuramoyl-L-alanine amidase family 2

Products: NA

Alternate protein names: Autolysin; Cell wall hydrolase [H]

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MNVRMLSANAVFLMLPALLAACSDAPRPPAVSFRIQNVPPVPRTMAQMSREVHINRDFMSPRSRARRAAHSMHPRFITIH
STANPKGDAAAHARALKRGAMGSLNWHFTVDQYRAVQHIPLNETGRHADRGGPGDMYSIGIEMGEVRSHNPIVTWNRSAK
LTAVLMKQYHIPLRNVVPHYYWTGKNCPAPLLTNGRPGHKWSWFISRVDYYRRCLETRPAAAF

Sequences:

>Translated_223_residues
MNVRMLSANAVFLMLPALLAACSDAPRPPAVSFRIQNVPPVPRTMAQMSREVHINRDFMSPRSRARRAAHSMHPRFITIH
STANPKGDAAAHARALKRGAMGSLNWHFTVDQYRAVQHIPLNETGRHADRGGPGDMYSIGIEMGEVRSHNPIVTWNRSAK
LTAVLMKQYHIPLRNVVPHYYWTGKNCPAPLLTNGRPGHKWSWFISRVDYYRRCLETRPAAAF
>Mature_223_residues
MNVRMLSANAVFLMLPALLAACSDAPRPPAVSFRIQNVPPVPRTMAQMSREVHINRDFMSPRSRARRAAHSMHPRFITIH
STANPKGDAAAHARALKRGAMGSLNWHFTVDQYRAVQHIPLNETGRHADRGGPGDMYSIGIEMGEVRSHNPIVTWNRSAK
LTAVLMKQYHIPLRNVVPHYYWTGKNCPAPLLTNGRPGHKWSWFISRVDYYRRCLETRPAAAF

Specific function: Autolysins are involved in some important biological processes such as cell separation, cell-wall turnover, competence for genetic transformation, formation of the flagella and sporulation. Could play a role in mother cell lysis with CwlC [H]

COG id: COG5632

COG function: function code M; N-acetylmuramoyl-L-alanine amidase

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acetylmuramoyl-L-alanine amidase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002502
- InterPro:   IPR002477 [H]

Pfam domain/function: PF01510 Amidase_2; PF01471 PG_binding_1 [H]

EC number: =3.5.1.28 [H]

Molecular weight: Translated: 25210; Mature: 25210

Theoretical pI: Translated: 11.51; Mature: 11.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVRMLSANAVFLMLPALLAACSDAPRPPAVSFRIQNVPPVPRTMAQMSREVHINRDFMS
CCEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHEECCCHHCC
PRSRARRAAHSMHPRFITIHSTANPKGDAAAHARALKRGAMGSLNWHFTVDQYRAVQHIP
HHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCCC
LNETGRHADRGGPGDMYSIGIEMGEVRSHNPIVTWNRSAKLTAVLMKQYHIPLRNVVPHY
CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHCCCHHHCCCCE
YWTGKNCPAPLLTNGRPGHKWSWFISRVDYYRRCLETRPAAAF
EECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNVRMLSANAVFLMLPALLAACSDAPRPPAVSFRIQNVPPVPRTMAQMSREVHINRDFMS
CCEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHEECCCHHCC
PRSRARRAAHSMHPRFITIHSTANPKGDAAAHARALKRGAMGSLNWHFTVDQYRAVQHIP
HHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCCC
LNETGRHADRGGPGDMYSIGIEMGEVRSHNPIVTWNRSAKLTAVLMKQYHIPLRNVVPHY
CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHCCCHHHCCCCE
YWTGKNCPAPLLTNGRPGHKWSWFISRVDYYRRCLETRPAAAF
EECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]