Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is acpS [H]
Identifier: 187735702
GI number: 187735702
Start: 1444021
End: 1444407
Strand: Direct
Name: acpS [H]
Synonym: Amuc_1208
Alternate gene names: 187735702
Gene position: 1444021-1444407 (Clockwise)
Preceding gene: 187735701
Following gene: 187735705
Centisome position: 54.2
GC content: 62.79
Gene sequence:
>387_bases ATGAGCCGCATTGCAGGATTGGGAATGGATTTGGCGGATATGGAACGCGTACGCCAGGCCCTGCGGAAAAACGGGGAGGC GTTTGCGTTGCGCATCTGCACCCCTGATGAGTGGGCTTATTGCCGGAAGCACGCGGATCCCGTGCCGCATCTGGCGGCGC GCTTTGCGGCCAAGGAGGCCGTGGCGAAAGCCCTGGGAACGGGAATCGGGGCGAAGTGCGCTTTTACGGATGTGGAGGTG GTGCGCGGCGATGCGGGAGTTCCTTCCATTCTTTTGCACGGGGCTGCGGGAGTGACCGCCCGGGAGCTGGGCATTACGGG CTGGTTCCTGACCATGACCCATTCCAGGTTGAGCGCCGCCGCCACCGTTATTGCCTTGGCGCAATAA
Upstream 100 bases:
>100_bases GCTCTTTTTGTGGGGATGGAGCAGGCCGTGAGGGAAATGCGCCAGGCGATCGACCGCCTGAGCTGATTGCGCCGTTTCAA TTGATCCCGGTTGCCGGAGT
Downstream 100 bases:
>100_bases AAAAGCCGTTCCCTGGGAAGAAAGGAACGGCTGGCATTAAAGGAGGAAAGGGAAGTTATTTTCTCCTTCTGCGTGCGGCA AATCCCGCGAACGCAAGCAG
Product: holo-acyl-carrier-protein synthase
Products: NA
Alternate protein names: Holo-ACP synthase; 4'-phosphopantetheinyl transferase AcpS [H]
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MSRIAGLGMDLADMERVRQALRKNGEAFALRICTPDEWAYCRKHADPVPHLAARFAAKEAVAKALGTGIGAKCAFTDVEV VRGDAGVPSILLHGAAGVTARELGITGWFLTMTHSRLSAAATVIALAQ
Sequences:
>Translated_128_residues MSRIAGLGMDLADMERVRQALRKNGEAFALRICTPDEWAYCRKHADPVPHLAARFAAKEAVAKALGTGIGAKCAFTDVEV VRGDAGVPSILLHGAAGVTARELGITGWFLTMTHSRLSAAATVIALAQ >Mature_127_residues SRIAGLGMDLADMERVRQALRKNGEAFALRICTPDEWAYCRKHADPVPHLAARFAAKEAVAKALGTGIGAKCAFTDVEVV RGDAGVPSILLHGAAGVTARELGITGWFLTMTHSRLSAAATVIALAQ
Specific function: Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein [H]
COG id: COG0736
COG function: function code I; Phosphopantetheinyl transferase (holo-ACP synthase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the P-Pant transferase superfamily. AcpS family [H]
Homologues:
Organism=Escherichia coli, GI1788916, Length=121, Percent_Identity=40.495867768595, Blast_Score=90, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6325025, Length=122, Percent_Identity=31.1475409836066, Blast_Score=65, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008278 - InterPro: IPR002582 - InterPro: IPR004568 - ProDom: PD004282 [H]
Pfam domain/function: PF01648 ACPS [H]
EC number: =2.7.8.7 [H]
Molecular weight: Translated: 13500; Mature: 13369
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRIAGLGMDLADMERVRQALRKNGEAFALRICTPDEWAYCRKHADPVPHLAARFAAKEA CCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHH VAKALGTGIGAKCAFTDVEVVRGDAGVPSILLHGAAGVTARELGITGWFLTMTHSRLSAA HHHHHCCCCCCEEEECHHHEEECCCCCCHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHH ATVIALAQ HHHHEECC >Mature Secondary Structure SRIAGLGMDLADMERVRQALRKNGEAFALRICTPDEWAYCRKHADPVPHLAARFAAKEA CCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHH VAKALGTGIGAKCAFTDVEVVRGDAGVPSILLHGAAGVTARELGITGWFLTMTHSRLSAA HHHHHCCCCCCEEEECHHHEEECCCCCCHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHH ATVIALAQ HHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA