Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is qor [H]
Identifier: 187735684
GI number: 187735684
Start: 1426146
End: 1427147
Strand: Direct
Name: qor [H]
Synonym: Amuc_1190
Alternate gene names: 187735684
Gene position: 1426146-1427147 (Clockwise)
Preceding gene: 187735681
Following gene: 187735689
Centisome position: 53.53
GC content: 58.28
Gene sequence:
>1002_bases ATGAGTGAGAATCATTATGCAGAGTTTTCCGAATGCAGTATGAAGCCCCAGGAGGTGCTGGAATATGTTTCCGGCCCCAT TCCCGTTCCGGAGGAGGGAGAAGTTCTGGTCCGGATGAAGGCGGCTCCGATCAACCCGGCGGACATCAATTTTGTACAGG GAGTTTATGGCCTGAAGCCCGTGCTGCCGCACTCCCGCGCCGGCCTGGAAGGCTGCGGCGTGGTACAGGAATCTCGCGCA GCGGGATTTCGAGAGGGAGATGAAGTGATTCTCCTGCGCGGCGTGGGTTCCTGGAGCGAGTATGTGGCGGTTCCCTCCGT GAATGTCATGAAGCTCCCGGTGAAGGTAGATCCCGTCCAGGCGGCCATGCTGAAGGTGAATCCCCTGACCGCTCTGCGCA TGCTGGAAGGGTTCGTTTCCCTGGAACCGGGGGATTGGCTGGTGCAGAATGCCGCCAATTCCGGAGTGGGAAGGTGCATT ATTCAACTGGCCCGTGAAATGGGCGTGAAGACAGTGAATTTTGTGAGAAGGCCGGATGAATTGAGGGATGAATTGACTGC GCTGGGCGCCGATCTGGTGGTGGGAGAGGATGACGGGGATGTGGTGAAGAATACGCTGGCCCGCCTGGATGGAAAGAGGC CTGTGCTGGCTTCCAATGCCGTGGGCGGGGAAAGCGCCCTGCGCCTGATGGATATGCTGGCTCCCGGTGGAAGCATGGTG ACGTACGGAGCCATGAGCCGGAAGAGCATCAAGGTGCCGAACGGTTTTCTGATTTTCAAGGGTATTAAACTGGAGGGCCT GTGGGTGACGCAGTGGCTTAAGAATGCCCCTGTTTCAGAGATTGAGGCCGCCTATGAGAAACTGGCGCGCCTGATGGCGG ACGGCAGGTTGAAGCAGGCTGTGGATACCGTTTATCCGCTAAGCGATGTGCGGAAGGCTGTGGAGAAGGCGCAGGAGGAG TTCCGCAGCGGCAAGGTGGTGCTTAGCATGGATTGCGCCTGA
Upstream 100 bases:
>100_bases CCCCTTTGGTTTTTTCACGGCAGCGGCATATGGCTGCCTGCTTCCGGGTAAAACGTATCCGGCGCTTGCACGGAGGGGCG TTCCATGAGAAATTGAAAGC
Downstream 100 bases:
>100_bases TGCGTGGAAAGGGAGTTTTTGCGCTTTCCCGTGCTGCGGAATGCTGGAAGGATTTTTTCAGCGTTCCGTGGTTTGGGTAG TATTGGCTGCTGGCCTGGAT
Product: Alcohol dehydrogenase zinc-binding domain protein
Products: NA
Alternate protein names: NADPH:quinone reductase [H]
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MSENHYAEFSECSMKPQEVLEYVSGPIPVPEEGEVLVRMKAAPINPADINFVQGVYGLKPVLPHSRAGLEGCGVVQESRA AGFREGDEVILLRGVGSWSEYVAVPSVNVMKLPVKVDPVQAAMLKVNPLTALRMLEGFVSLEPGDWLVQNAANSGVGRCI IQLAREMGVKTVNFVRRPDELRDELTALGADLVVGEDDGDVVKNTLARLDGKRPVLASNAVGGESALRLMDMLAPGGSMV TYGAMSRKSIKVPNGFLIFKGIKLEGLWVTQWLKNAPVSEIEAAYEKLARLMADGRLKQAVDTVYPLSDVRKAVEKAQEE FRSGKVVLSMDCA
Sequences:
>Translated_333_residues MSENHYAEFSECSMKPQEVLEYVSGPIPVPEEGEVLVRMKAAPINPADINFVQGVYGLKPVLPHSRAGLEGCGVVQESRA AGFREGDEVILLRGVGSWSEYVAVPSVNVMKLPVKVDPVQAAMLKVNPLTALRMLEGFVSLEPGDWLVQNAANSGVGRCI IQLAREMGVKTVNFVRRPDELRDELTALGADLVVGEDDGDVVKNTLARLDGKRPVLASNAVGGESALRLMDMLAPGGSMV TYGAMSRKSIKVPNGFLIFKGIKLEGLWVTQWLKNAPVSEIEAAYEKLARLMADGRLKQAVDTVYPLSDVRKAVEKAQEE FRSGKVVLSMDCA >Mature_332_residues SENHYAEFSECSMKPQEVLEYVSGPIPVPEEGEVLVRMKAAPINPADINFVQGVYGLKPVLPHSRAGLEGCGVVQESRAA GFREGDEVILLRGVGSWSEYVAVPSVNVMKLPVKVDPVQAAMLKVNPLTALRMLEGFVSLEPGDWLVQNAANSGVGRCII QLAREMGVKTVNFVRRPDELRDELTALGADLVVGEDDGDVVKNTLARLDGKRPVLASNAVGGESALRLMDMLAPGGSMVT YGAMSRKSIKVPNGFLIFKGIKLEGLWVTQWLKNAPVSEIEAAYEKLARLMADGRLKQAVDTVYPLSDVRKAVEKAQEEF RSGKVVLSMDCA
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI67078404, Length=323, Percent_Identity=39.0092879256966, Blast_Score=201, Evalue=7e-52, Organism=Homo sapiens, GI67078406, Length=300, Percent_Identity=40.3333333333333, Blast_Score=197, Evalue=8e-51, Organism=Homo sapiens, GI18379349, Length=311, Percent_Identity=28.6173633440514, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI22538446, Length=317, Percent_Identity=28.391167192429, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI22538444, Length=317, Percent_Identity=28.391167192429, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI194239674, Length=325, Percent_Identity=24.6153846153846, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI13236495, Length=325, Percent_Identity=24.6153846153846, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI194239676, Length=147, Percent_Identity=31.2925170068027, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI24308257, Length=327, Percent_Identity=24.1590214067278, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI28557745, Length=294, Percent_Identity=27.891156462585, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1790485, Length=319, Percent_Identity=28.5266457680251, Blast_Score=79, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17536829, Length=300, Percent_Identity=40.6666666666667, Blast_Score=187, Evalue=6e-48, Organism=Caenorhabditis elegans, GI17556000, Length=321, Percent_Identity=33.9563862928349, Blast_Score=168, Evalue=5e-42, Organism=Caenorhabditis elegans, GI17507255, Length=187, Percent_Identity=33.1550802139037, Blast_Score=69, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6319500, Length=274, Percent_Identity=31.7518248175182, Blast_Score=125, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6319520, Length=320, Percent_Identity=25, Blast_Score=66, Evalue=8e-12, Organism=Drosophila melanogaster, GI45550423, Length=310, Percent_Identity=39.6774193548387, Blast_Score=192, Evalue=2e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 36080; Mature: 35949
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENHYAEFSECSMKPQEVLEYVSGPIPVPEEGEVLVRMKAAPINPADINFVQGVYGLKP CCCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCC VLPHSRAGLEGCGVVQESRAAGFREGDEVILLRGVGSWSEYVAVPSVNVMKLPVKVDPVQ CCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEECCCHHHEEECCCCEEEEECEEECCHH AAMLKVNPLTALRMLEGFVSLEPGDWLVQNAANSGVGRCIIQLAREMGVKTVNFVRRPDE HHHEECCHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHCCCHH LRDELTALGADLVVGEDDGDVVKNTLARLDGKRPVLASNAVGGESALRLMDMLAPGGSMV HHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCCEE TYGAMSRKSIKVPNGFLIFKGIKLEGLWVTQWLKNAPVSEIEAAYEKLARLMADGRLKQA EECCCCCCEEECCCCEEEEECCEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHH VDTVYPLSDVRKAVEKAQEEFRSGKVVLSMDCA HHHHCCHHHHHHHHHHHHHHHHCCCEEEEECCC >Mature Secondary Structure SENHYAEFSECSMKPQEVLEYVSGPIPVPEEGEVLVRMKAAPINPADINFVQGVYGLKP CCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCC VLPHSRAGLEGCGVVQESRAAGFREGDEVILLRGVGSWSEYVAVPSVNVMKLPVKVDPVQ CCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEECCCHHHEEECCCCEEEEECEEECCHH AAMLKVNPLTALRMLEGFVSLEPGDWLVQNAANSGVGRCIIQLAREMGVKTVNFVRRPDE HHHEECCHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHCCCHH LRDELTALGADLVVGEDDGDVVKNTLARLDGKRPVLASNAVGGESALRLMDMLAPGGSMV HHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCCEE TYGAMSRKSIKVPNGFLIFKGIKLEGLWVTQWLKNAPVSEIEAAYEKLARLMADGRLKQA EECCCCCCEEECCCCEEEEECCEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHH VDTVYPLSDVRKAVEKAQEEFRSGKVVLSMDCA HHHHCCHHHHHHHHHHHHHHHHCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]