Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735668
Identifier: 187735668
GI number: 187735668
Start: 1409311
End: 1409994
Strand: Direct
Name: 187735668
Synonym: Amuc_1174
Alternate gene names: NA
Gene position: 1409311-1409994 (Clockwise)
Preceding gene: 187735667
Following gene: 187735670
Centisome position: 52.9
GC content: 56.14
Gene sequence:
>684_bases ATGTCCGACTGCCTTTCCTCTCTGGGCTATCCTTTCCGTGGAAGGCCCATGGTTTTTGTCTTTTCCGTCATGATGGTATG GGGCATGTTCCTGGCGGCCCGGGATGTTCTCATCGGATGGATTGCCGCCTTTTGTTTTCTGCTGCCTTTCATGTGCGCCT TTTTCATGAAAATGGTGAGGCAGTCCGCCATGGGAGAAGAGGATATCTGCCCCTTTCCTGAACTGGATGAATGGCTTGAC TCCCTCATGCTGCCTTTTGTCCGGCTGGTGGTGTGCATCATCGTTTCCTTCCTTCCTTTCGCCGTGTATGCGCATACTGC GGCCTGGGCGGCGGATACTCCCCTGGCGTGGCTGTTCCTGGCGGCGGGTGTGATTTACTTTCCCGGCGTATTCATGAGAA CCTCCGTTCGGGAACGTTTTTCCGGTCTTTCTCCCGTGGGCTGGTGGGGGCTGGTCAGAAGGGCTCCCTTTTCCTATGCC GGGTTACTTGGCGCCATATGCGCCGGGGGATGGATCATCCTGAACCTTCCTTCAGGGCCTTTGATGGATTTCGCCATGGT GCCCGTGAAGCTGTATGTCGCTTGCGTGTTGATGAATATGTGCGGACTGTTCATGCTCAAGCATGAATTTGCCGGGGAGG AAGAGGTCGGCAGCTTTTCCCCTTCCGGGCCTGCGGCCTCGTGA
Upstream 100 bases:
>100_bases TGTGGAGGCATTCTATTCCTGAAGAGAAGGGAGGATTATTTTGTTAGACAGTTGGATAAGACGTTGACGATACGTGAATG AATGTTCTAACATTTTTGGT
Downstream 100 bases:
>100_bases TGCTGCCGCCTTTCCGGCGGGCCGGGAACAGGTGAGTTTATTTGGCGGGTTCCTTGTCCAGGTTCAGGATACCCAGTACA GACATGTTGCCTTCCGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MSDCLSSLGYPFRGRPMVFVFSVMMVWGMFLAARDVLIGWIAAFCFLLPFMCAFFMKMVRQSAMGEEDICPFPELDEWLD SLMLPFVRLVVCIIVSFLPFAVYAHTAAWAADTPLAWLFLAAGVIYFPGVFMRTSVRERFSGLSPVGWWGLVRRAPFSYA GLLGAICAGGWIILNLPSGPLMDFAMVPVKLYVACVLMNMCGLFMLKHEFAGEEEVGSFSPSGPAAS
Sequences:
>Translated_227_residues MSDCLSSLGYPFRGRPMVFVFSVMMVWGMFLAARDVLIGWIAAFCFLLPFMCAFFMKMVRQSAMGEEDICPFPELDEWLD SLMLPFVRLVVCIIVSFLPFAVYAHTAAWAADTPLAWLFLAAGVIYFPGVFMRTSVRERFSGLSPVGWWGLVRRAPFSYA GLLGAICAGGWIILNLPSGPLMDFAMVPVKLYVACVLMNMCGLFMLKHEFAGEEEVGSFSPSGPAAS >Mature_226_residues SDCLSSLGYPFRGRPMVFVFSVMMVWGMFLAARDVLIGWIAAFCFLLPFMCAFFMKMVRQSAMGEEDICPFPELDEWLDS LMLPFVRLVVCIIVSFLPFAVYAHTAAWAADTPLAWLFLAAGVIYFPGVFMRTSVRERFSGLSPVGWWGLVRRAPFSYAG LLGAICAGGWIILNLPSGPLMDFAMVPVKLYVACVLMNMCGLFMLKHEFAGEEEVGSFSPSGPAAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25113; Mature: 24982
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 10.6 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 6.6 %Met (Mature Protein) 10.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDCLSSLGYPFRGRPMVFVFSVMMVWGMFLAARDVLIGWIAAFCFLLPFMCAFFMKMVR CCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSAMGEEDICPFPELDEWLDSLMLPFVRLVVCIIVSFLPFAVYAHTAAWAADTPLAWLFL HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH AAGVIYFPGVFMRTSVRERFSGLSPVGWWGLVRRAPFSYAGLLGAICAGGWIILNLPSGP HHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCEEEEECCCCC LMDFAMVPVKLYVACVLMNMCGLFMLKHEFAGEEEVGSFSPSGPAAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCC >Mature Secondary Structure SDCLSSLGYPFRGRPMVFVFSVMMVWGMFLAARDVLIGWIAAFCFLLPFMCAFFMKMVR CHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSAMGEEDICPFPELDEWLDSLMLPFVRLVVCIIVSFLPFAVYAHTAAWAADTPLAWLFL HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH AAGVIYFPGVFMRTSVRERFSGLSPVGWWGLVRRAPFSYAGLLGAICAGGWIILNLPSGP HHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCEEEEECCCCC LMDFAMVPVKLYVACVLMNMCGLFMLKHEFAGEEEVGSFSPSGPAAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA